Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01444 GGACAGGCCAAAACCCCTAGCCTTTTTGCTCTCATTGGCTACCAAAATGTGGATGGTGGGTTACAATGAAGGTGGTGACTTCAACATGGTTGATCATTCATTTAGTGGGAGGAAACTCAGGCCTCTCGTGCCAAGACCAATGACCTCTCTCAACAATGCACCGCCAACAACCACTCCTAGCTTATCTCACATCCATGGCAATGATTTCCTATCACAATATCACTATCACCATCTGGAACAAAACAAGAGAGAGTTCAATGGTGCAGCACCAGTTGTGGTGAGCTCAAGGTGGAATCCAACCTCAGAGCAACTAAGAGTCCTTGAAGAGTTGTATAGAAGAGGAACAAGGACACCATCTGCAGAGCAAATCCAACACATCACTTCACAGCTCCGAAGGTTTGGTAATATTGAAGGGAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCCAGGGAAAGGCAAAAGCGCCGCCGCCAAATGGAATCACATGCTGAAACTCCTGAGAAGAAAGATTTAGCTGCAAGTAGAGCAGTGTTTGAAGTTGAACGGACCAAGAACTGGACACCCTCAACAAACTGCAGTACTATTGCAGAGGAATCTGTTTCAACACAAAGGACAGCAAAATCAGTGGCTGCAGAGAGTAGAACAGATGGATGGCTCTTATTCGATGAAGGGGAATTACAGCAAAGAAGAAACCTTTCTGAAATGAATGCAACGTGGCATGTGATGCAGATACCATGTCCTTCTCCTACTGCACCTGTCACCCACTTCATAAACACCCCTCCTAATGCGTCTTCAGCTAGTAGTATGGCCACTACTATAACCACAGTAACAAGAAGAAAAATGGACCCAAACCTCATTAAGACACATGATCTCAGCTTTTTAATTTCACCCCCGAGAGAAAACAGTGTTATCTACTTAAGCAGCAGCAGTAGTACCAGTGATGATAATAACTGTGTGGAGTCTCAAACCCTTCAACTTTTCCCATTAAGGAGTGGTGATGACAGCAGTTACAACATGAAGGATAAAGAGACAGAGATATCAGCTTCAGCAATGAATGCCGATAACTTGACCCCAAGCAAGTTTTTCGAGTTCCTTCCTATGAAGGAGTAATATCAGAAACACATGCTATGTTTGTAAAATGATAGGAATGTGTTTCAATGTTGTTATTTTGTTGAAAAATGGCACTGCTTTTATTGTTAGTTG 1207 0.4292 MWMVGYNEGGDFNMVDHSFSGRKLRPLVPRPMTSLNNAPPTTTPSLSHIHGNDFLSQYHYHHLEQNKREFNGAAPVVVSSRWNPTSEQLRVLEELYRRGTRTPSAEQIQHITSQLRRFGNIEGKNVFYWFQNHKARERQKRRRQMESHAETPEKKDLAASRAVFEVERTKNWTPSTNCSTIAEESVSTQRTAKSVAAESRTDGWLLFDEGELQQRRNLSEMNATWHVMQIPCPSPTAPVTHFINTPPNASSASSMATTITTVTRRKMDPNLIKTHDLSFLISPPRENSVIYLSSSSSTSDDNNCVESQTLQLFPLRSGDDSSYNMKDKETEISASAMNADNLTPSKFFEFLPMKE 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01444 355 FunFam WUSCHEL-related homeobox 4 79 146 - -
Pste9g01444 355 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 65 350 IPR044555 GO:0003700|GO:0099402
Pste9g01444 355 SUPERFAMILY Homeodomain-like 80 146 IPR009057 -
Pste9g01444 355 Pfam Homeodomain 80 139 IPR001356 GO:0003677
Pste9g01444 355 CDD homeodomain 81 141 IPR001356 GO:0003677
Pste9g01444 355 SMART HOX_1 77 144 IPR001356 GO:0003677
Pste9g01444 355 Gene3D - 79 146 - -
Pste9g01444 355 ProSiteProfiles 'Homeobox' domain profile. 85 140 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01444 Pste-Chr9 13904443 13906703 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01444 1 354 Wox Gene Family AT3G18010 38.144 8.68e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pste9g01444 Homeodomain 1.3e-19 CL0123