Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01424 TTCTACTCTTGTCCCCGCACCTTAAAATCCAACAACTCACTGCACGCATACACTTCACTTTTCTATTCTTTCCTCAAACTTTTGTTCTTTGCGTAGCTACCAACAGATAAATTCTTGAGCGTCTCTGTTTTTTTCGCCACATGGAGAGGGAATTTTTTGGCTTCAGTTCCAAAAATGGCGCATGGACTACTCTAAAAGATGATGCTGCCACAAAACCAAAAGACCCAGTGTGGAATTCAAGAATACAGTGGTCATTCCCAAACAAGGTCTTAGCCCTTCCTCAGTTCCTGTCCTTCAAAACCGATCAGGAAGAAAGGCCTAGAAAGACTACTCTAGATCCACCAGCTTCAGCTGGATATATGACCATATCAACTAAAGATGTTTTTGAGTCTAACCAGAAACCATTCTCGGGTTTGACGCAGAGAGGCAAGCATGCTGCAGGAAACAAACATGGAATGGCAGTTTATCCTCAGCAATGTTGTGATGCACAATCAGCATGCCTTCAGGATGCAAGAAAATTTTCAGTTTCCAACCAATCAAGTAAAGTGAGTCCTGTTCTTCAATCTAATCTTGCTACTACCGGACTGAACATGGTCAATTCAGTCATAAAATCACCATCTCTTGGTGGCAAATACTCTGGCACACCTCTATCTGTTCTTCCATCAACAGGTTCAGTTGTTGGATCAACTGACTTAAGGAATTGTTCCAAATCCTCTGGCATGGCTTCTCAGCTAACCATTTTCTATGCTGGTTCTGTATGTGTTTATGATCACATAACTCCTGATAAGGCCAAGGCTATCATGTTAATGGCTGGAAAAGGGTCTACTCCAACTCAGAAAATGGAAATTTCCACAGCTAAATTGCAACCAGCAATCTCTATTCCCTCCAAAGATGATGGTTTCCTTATAAGCCAATCCTTTCCCCTTTCACCCTTCCCAATGATCTCTCATGTCAATTCTCAGCCAGGAGGAGGATCTTCTAGCAAAAATGAAATTGCAATCATAAGGAAAGTAGGGCCTTCAACTGTCCCTACTAACCATATGGAGTCATCATTTATTGTTGGTTCTGTAGGATCTGCATCTAAAGAAAAGGCTCAACCAGTATGCTTGCCTCAAGCTCGTAAAGCATCCTTGGCTCGGTTTTTGGAGAAGAGAAAAGAAAGGATTTTGAGCACAACACCATACTTTTATATGAGCAAGCCTGAAAGCAGCTCTTCTGGATCAGACAGTACTGTTGGTTTCTCTTTGAACTTCTCCGGATCCAGTTCTCTACCAGCCACCAACTAGCACTACTACAGGAATGGAAGTTTATATTTATCCACTTCTGTAATTGTAAGATCATTTTTATGGTCATTGGTAGAGAAGTTTCGTAGGCATTTTTGTCCTAAATATTTTCTTCTTGTTTCTGATTAGCTTTTCATAATCATTACTTTTTGTAGTAATTTACTTCATTATGAAGATCCCGCAAGTTGCAGGTTGTCATATATATAATAGTTTTTAACTTTCATCATGATGTATAATTATTTCTTTTATACATATTTCAGTGAATAATCTTCAGATTTATGTTATGGCTATTGGATTCATCATTCATCAAAATATCATTTCAGCTGTTACAAAT 1617 0.3921 MEREFFGFSSKNGAWTTLKDDAATKPKDPVWNSRIQWSFPNKVLALPQFLSFKTDQEERPRKTTLDPPASAGYMTISTKDVFESNQKPFSGLTQRGKHAAGNKHGMAVYPQQCCDAQSACLQDARKFSVSNQSSKVSPVLQSNLATTGLNMVNSVIKSPSLGGKYSGTPLSVLPSTGSVVGSTDLRNCSKSSGMASQLTIFYAGSVCVYDHITPDKAKAIMLMAGKGSTPTQKMEISTAKLQPAISIPSKDDGFLISQSFPLSPFPMISHVNSQPGGGSSSKNEIAIIRKVGPSTVPTNHMESSFIVGSVGSASKEKAQPVCLPQARKASLARFLEKRKERILSTTPYFYMSKPESSSSGSDSTVGFSLNFSGSSSLPATN 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01424 381 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 128 359 IPR040390 -
Pste9g01424 381 Pfam Jas motif 324 348 IPR018467 -
Pste9g01424 381 ProSiteProfiles Tify domain profile. 191 226 IPR010399 -
Pste9g01424 381 Pfam tify domain 195 225 IPR010399 -
Pste9g01424 381 SMART tify_2 191 226 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01424 Pste-Chr9 13602685 13610038 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01424 35 348 Tify Gene Family AT3G17860 37.072 1.63e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pste9g01424 tify 1.3e-16 No_clan