Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01421 TTACTGTTACTGTTACTTCCTTCATCAACGTTTCTTTTTATTAACAATGTCTTTTCTCAAAATCAAAACACAGAGAACAAAACAATGCAACATTCTCACACTCTCACTCCAATTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCGACAGTAACATTCTCCGACATCTCCTCCGAGCGCGCGGCGCTCCTCTCCCTCCGCTCCGCCCTTCGCGGCCGCACTCTCCTCTGGAACCCCACCGCCCCGTCACCCTGCGGCTGGACCGGCGTCCAATGCGACCCCGCCAATGCCACCGTCCTCCAGCTCCATCTTCCCGCCGTCGCACTCTCCGGCCACCTCCCCGACGCCGTTTTTCCGGCTCTCCGTAACCTCCACACCCTCAGTCTCCGCGTCAACGCCCTCTCCGGCACCCTCCCCCCCGACCTCGCTGAATGCGCCGCCCTCCGCAACCTCTTCCTCCAGGGCAACCACTTCTCCGGCGAGGTTCCGCCGTTTCTCGCCGGCATGACCGGCCTCGTCCGTCTCAATTTGGCCTCCAACAACTTTTCCGGTCCAATTCCGGCCCGGTTCGGGAACCTGACCCGGCTGAGGACCCTTTTCCTTGAGAACAACCGTTTCAACGGTTCGCTACCCGGGTTGGAAGAACTGGATGAATTGGCTCAGTTTAATGTCTCTTACAACATGTTGAACGGTTCTGTGCCTAAAAAGTTGCAAACTTTTGGCCAAGATTCCTTTTTGGGGAATTCCCTTTGCGGGAAGCCACTTGGGATTTGTCCTTGGGATGATGGGGGCGGTGAGAGGGGTGCAAATGGGAGTTCAAATTCAAGTGGGCCTGAAGGGACTGTGATTGGAGGGAATAGGAAAAGGAAGGGGAAGCTTTCTGGGGGTGCCATTGCTGGGATTGTTGTTGGGAGTGTGGTGCTTCTTTTGCTCATTGTCTTTGCCTTCATTCTCTTGTGTAGAACTGGGAACAAGACTAGGAGTGTTGATAATGTTGATAAGATTGTGGGGTTGAAGGAGGAGCAGCAGCACCATGGGGACGTCGAAATTGAGAGTGGCAATGTGGAGAATGGCGGTGGTGGGAATTCAGCGACTTCGGCGGCGGCGGCAGTGGTGGCTAGTGGGGGTAGTGGTGGCGGAGATAAGAAATTGGTGTTTTATGGTAACAAGGTTAAGGTGTTTGATTTGGAGGATTTGCTAAGGGCTTCTGCTGAGGTGTTGGGGAAAGGGACTTTTGGGACAACCTATAAGGCTGTTTTGGAGGATGGACCTTTGGTAGCTGTGAAGAGGTTGAGAGATGTGACTGTTTCGGAGAAGGAGTTTAAGGAGAAGATTGATGGGGTGGGAGTGATGGATCATCAGAATTTGGTGCCTCTCAGAGCTTACTATTATAGCCGGGATGAGAAGCTTCTTGTTCATGATTACATGCCAATGGGAAGCCTATCTGCTATTTTGCATGGAAACAAAGGAGTGGGTAGGACACCATTGAACTGGGAAATGAGATCAAGCATTGCACTAGGAGCTGCTCGAGGCATAGAGTACCTACATTCACAAGGACATAGTGTTTCTCATGGAAACATTAAGTCCTCCAACATCCTCCTAACTAAGTCCTATGATGCCAGGGTGTCTGATTTTGGCCTTTCTCACCTTGTTGGCCCCTCATCCACTCCCAATAGGGTTGCCGGCTACCGTGCTCCTGAAGTAACCGATCCGCGCAAAGTATCTCAGAAGGCTGATGTATACAGCTTCGGGGTGTTGCTCTTGGAACTTCTTACTGGAAAGGCTCCTACACATGCCCTCTTGAATGACGAAGGAGTGGACCTTCCAAGATGGGTGCAATCAGTTGTTAGAGAAGAGTGGAGTTCTGAGGTGTTTGATATTGAGCTTCTTAGGTATCAGAATTCTGAAGAGGAAATGGTTCAGTTGTTGCAACTTGCAGTGGATTGTGTAGTTCCATACCCTGATAACCGCCCTTCAATGTCTCAAGTGAGACAACGCATAGAAGAGCTACGTGGGTCTAGCATTAAAGAGGATGCTGAAGACCAAATTCAACAACCTGATTTGATCAATGATATAGATGATGTATCTTCTAGATGAGTTTGTGTAAAAAGAAATTATAATATGATTAAGGACTGTGATCCTGGTCAATCTTTACATGACACCTTTTAATTTGTAAAAGATTTTATGACGTGTCATATTGAGATTGGTTGAGACTACATGACCTTGAACCATATAACGATTTCTCTTATACAAGGATCTTTATGGTTTTGTCAAGAGCCCCAGCCCCACATTTTTTTTCCTAAATCCTGTGCTTATGTTGTATTTTTTCTTTTAAGCTTGGGCCATAATTTTCTTCAGAACCCAACGTTGAATTTTACTTCAATTCTCATTGTACTGGTCCCCCTTTTTTCTTCCTTATCAATACCTAGAGGAAGTGGGTATTTGTTCCATTAGTTATTGCCGGTGGATTCTGGTTGATGTAATTATTACTTTCGCTTTAGCATTGGCTTTTCTTTTGGTGACACTTTTCTCTCAGTAGATACTGTGATGATATAGTCGCTTTCATGGCTGGTTGTAATGTCCTATAGTTGGCATGTAGCATGTATTCAATTGATGTGAACCCCACATTGGTAAAGACAATATGGATGATTTATACCTAG 2660 0.4714 LLLLLLPSSTFLFINNVFSQNQNTENKTMQHSHTLTPILFFFFFFFFFSTVTFSDISSERAALLSLRSALRGRTLLWNPTAPSPCGWTGVQCDPANATVLQLHLPAVALSGHLPDAVFPALRNLHTLSLRVNALSGTLPPDLAECAALRNLFLQGNHFSGEVPPFLAGMTGLVRLNLASNNFSGPIPARFGNLTRLRTLFLENNRFNGSLPGLEELDELAQFNVSYNMLNGSVPKKLQTFGQDSFLGNSLCGKPLGICPWDDGGGERGANGSSNSSGPEGTVIGGNRKRKGKLSGGAIAGIVVGSVVLLLLIVFAFILLCRTGNKTRSVDNVDKIVGLKEEQQHHGDVEIESGNVENGGGGNSATSAAAAVVASGGSGGGDKKLVFYGNKVKVFDLEDLLRASAEVLGKGTFGTTYKAVLEDGPLVAVKRLRDVTVSEKEFKEKIDGVGVMDHQNLVPLRAYYYSRDEKLLVHDYMPMGSLSAILHGNKGVGRTPLNWEMRSSIALGAARGIEYLHSQGHSVSHGNIKSSNILLTKSYDARVSDFGLSHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNDEGVDLPRWVQSVVREEWSSEVFDIELLRYQNSEEEMVQLLQLAVDCVVPYPDNRPSMSQVRQRIEELRGSSIKEDAEDQIQQPDLINDIDDVSSR 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01421 698 PANTHER OS05G0588300 PROTEIN 39 674 - -
Pste9g01421 698 SUPERFAMILY L domain-like 72 238 - -
Pste9g01421 698 FunFam Probable inactive receptor kinase RLK902 56 214 - -
Pste9g01421 698 MobiDBLite consensus disorder prediction 262 286 - -
Pste9g01421 698 Gene3D Phosphorylase Kinase; domain 1 379 475 - -
Pste9g01421 698 ProSiteProfiles Protein kinase domain profile. 401 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01421 698 Gene3D Ribonuclease Inhibitor 54 253 IPR032675 -
Pste9g01421 698 MobiDBLite consensus disorder prediction 673 698 - -
Pste9g01421 698 FunFam Probable inactive receptor kinase At1g48480 476 678 - -
Pste9g01421 698 Pfam Protein kinase domain 404 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01421 698 ProSiteProfiles Leucine-rich repeat profile. 195 217 IPR001611 GO:0005515
Pste9g01421 698 CDD STKc_IRAK 407 670 - -
Pste9g01421 698 SUPERFAMILY Protein kinase-like (PK-like) 405 667 IPR011009 -
Pste9g01421 698 FunFam pollen receptor-like kinase 1 371 475 - -
Pste9g01421 698 Gene3D Transferase(Phosphotransferase) domain 1 476 694 - -
Pste9g01421 698 Pfam Leucine rich repeat N-terminal domain 57 93 IPR013210 -
Pste9g01421 698 ProSitePatterns Protein kinases ATP-binding region signature. 407 429 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01421 Pste-Chr9 13561912 13565027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01421 55 687 Receptor kinase-like Gene Family AT1G48480 58.333 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste9g01421 Pkinase 4e-38 CL0016