Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01412 AAAAATAAAACACAAAATTCAGACACAACAGTCACAACAAGCGCATCATCGAAGTGTCCTTTCTCTCTTCTTTCCCTCAGTTTCAGGAGGACTATAGAGACATGAGCTCTCAAGTTCGAAGAGAAAGAAGGGAGGGGTGGAGGGCTCCACCGCAAGGTGCCACTCGTCGAGAATGGGTCCCCAGAGGGAGTGCTGCATCCACCTCTGTTGCTCACCCATCAAATTTGCATTCAAGTAGTAATGCTGATGCCAATCAAGGGATTCCTGTTGCTCTGCCAGCTTCTCGTGTTAGAAGCAACAATCATGGGAATGTATCTGTTACTTCCAATCAAGGGGTGTCTGTGGCTTGGTCGGCCAATTATGGTAGAAGCAACAATCATGCCACTGATTCTGTTTCTTCCAATCAAGGGGTGGCCAGTGCTCGGCCGGTGAGTCATGATAGCAGCTACAATCATGGGAGTGATTCTGGTTCCTCCAATCAGGGAATGGTCCTTGTTCCACTAGTGAATCGCCATAGAAACAACAATCACGGGAGTTATAGGACGGAAAGGGAAATGGATAAAGGGAGGGGTGAGAATCAGGTGGGGAAGGGATTTGGATTGGGATTCAGAGATGCTAGTTTGCCTCAATTGGTGCAAGAGATTCAGGAGAAGCTCTTGAAAGGTGCTGTTGAGTGCATGATTTGCTATGAGATGGTCCAGAGGTCTGCAGCGGTTTGGTCTTGCTCCAGCTGCTACTCTATCTTTCACCTGATCTGCATCAAGAAGTGGGCTAGGGCACCCATTTCAAGTGATTTGTCTGTGTCCATGGAGAAGAATCAAGAGTTTAATTGGCGGTGTCCTGGTTGTCAGTCTGTTCAGTTTACCTCTTCAAAGGAGATTAGGTATTTTTGCTTTTGTGGGAAGAGGATAGACCCTCCATCTGATTTGTATCTGACACCACATTCGTGTGGAGAACCATGCGGGAAGCCTCTTGAGAGGGAATTGTTGGTTGCTGGAGGGAGTGGGGATAATCTTTGCCCTCATTCTTGTGTCTTGCAATGCCATCCAGGACCATGCCCTCCCTGTAAAGCATTTGCTCCTCCACGGTTGTGCCCTTGTGGGAAGAAAAATATTACCACTCGTTGCTCTGATCGCCAGTCTGTGTTTACCTGTGGAGTGTGCTGTGGCAAACTTCTTGTATGTGGGCGCCATTATTGTGAGCACATTTGTCATGTGGGTCCGTGTGATCCTTGTAAGGTTCAAATCAATGCCACTTGCTTTTGTAGTAAAAAGACTGATGTTTTTCCTTGTGGAGATGTGGCTGTGAAGGGTGAAATTGAAGCAAAAGGTGGGATTTTTTCTTGTGGTTCCTGTTGTCTAAAGAAACTTAGTTGTGGTCATCATGTCTGTAGCGAGATTTGTCATCCAGGCAGCTGTGGGGAATGTGAATTTTCACCTAGCCTTGTTAAGACATGCTGTTGTGGGAAAACAAGGTTGGACAATAAACGCCAGAGTTGTTTGGATCCAATACCCACCTGCTCTCAAGTATGTGGCAAGCTCCTTCCTTGTGGTGTGCATTCTTGTAAAGAGGCATGTCATGTTGGGGAGTGTCCACCTTGTTTGGTTCAAGTTTCACAGAAGTGTCGTTGTGGCTTGACTTCCCGAATTGTGGAGTGCTATAAGACTACGATGGAGAATGAGAAATTTATGTGTGAAAAGATCTGTGGGATAAAAAAGAATTGTGGAAGGCATCGATGTAGTGAAAAGTGTTGTCCATTTTCTAATCCTAATCCACATAATAATTATTTGAGTGGAGATTGGGTTCCTCACTTTTGTTCCATGCCCTGTGGAAAGAAGCTAAGGTGTGGCCAGCATGTGTGTGAATGTCTGTGTCACAGTGGTCATTGTCCAGCTTGTTTCCAAACAATTTTTACTGAATTGACTTGTGCGTGTGGTGGGACTTCAAGACTTCCTCCTCAACCTTGTGGTACACCGCCCCCCTCATGTCAGCTTCCTTGCTCAATTCCTCAGCCGTGTGGTCATTCAGGCTCACACAGTTGCCATTTTGGAGACTGCCCTCCTTGTTCAGTGCCTGTAGCAAAAGAATGTATTGGTGGGCACGTAGTTCTTAGAAACATACCTTGTGGTTCCAAGGATATTAGATGCAATCATCCTTGTGGGAAGACCAGGCAGTGTGGTTTGCATGCGTGTGGCAGAACATGTCACTCACCACCTTGTGATAATCTATCTGGTGTTGCCCAAGGTTTCAAAACGCCATGTGGCCAAACATGTGGTGCTCCAAGGAGCTGCTGCCGGCACACATGTAAGGCTCCTTGTCACCCTTCATCTCCCTGCCCAGATATAAGATGCGAATTCCCTGTTACAATCACTTGTTCTTGTGGCCGCATTACTGCAAATGTGCCTTGTGATGCTGGTGGTAGCAGTAGCAATTATAATGCTGATGCCATACATGAAGCTTCCATTATTCAAACATTGCCTGTACCGCTTCAACCAGTTGATACAAATGGCAAGAAAGTTCCCCTTGGACAAAGAAAGCTGATGTGTGATGATGAATGTACCAAGCTGGAACGCAAAAGGGTTCTTGCGGATGCTTTTGACATTACTGCTCCAAATCTGGATTCTCTCCATTTTGGTGAGAACCCTCATTCTTTTGAATCACTTTCCGATTTGTTCAGGCGTGAGCCAAAATGGGTTTTAGCAGTTGAGGAGAGATGCAAAGTTTTAGTACTTGGCAAGAGTAGAGGAACTACACACGGTTTAAAAGTCCACATCTTTTGTCCCATGCTGAAGGAAAAAAGAGATGCAGTGAGGTTGATTGCTGATAGATGGAAGCTTGTAGTCAATGCTGCTGGCTGGGAGCCAAAGCGATTTATTGTAATTTCTGTTACACCAAAATCGAAGACCCCAGCTCGTGTGATGGGTGTTAAGGGCAACACATCGTTGAATGTGTCCCTTCCTCCTGTATTTGATCCATTGGTTGATATGGACCCGCGACTCGTGGTCTCATTTCCAGACTTACCTAGGGATGCTGATATTAATGCCTTGGTATTGAGGTTTGGTGGTGAGTGTGAGCTTGTTTGGTTGAACGACAAAAATGCTTTGGCTGTTTTTCATGATCCTGCCCGGGCTGCAACTGCATTGAGGAGGTTGGATCATGCCACAGGTTATCAGGGAGCTATTTTGGTTGCCTCAAATGTTGGGGCATCAGCGGCTTCTTCAGCTACTAATGCCTGGGGAGGAGCAGGGGTAATCAAAGGAGTGCTGCCAGTGTCCAAAGGTAATTCATGGAAAAAGGCTGTAGTTCAAGACCCTGGTCGGAAAGAAGATTCTTGGGGTGGTAAAGAGTGGACTGCAGGTTCTGTGAATATCCAGCCATCTGTTTGGAAGAAAGAAGCACCTATATCTGCTTCTTTAAATCTTTGGAATGTCTTGGACCAGGAGTCGGGTTCAAGTTCGTCATTTACAACTGTTGGAGCTGAAGTTTCTGGGAAGCAAAATGGACAAAGTGCTGCCTCAACTCTGCTGTTTGGTGAAGAAGGTAGCTCAAATGAAGAGGGTAATTTGGATGCAGCTTCTGAAGTAGTTGATGATTGGGAGAAGGCTTATGAA 3611 0.4594 MSSQVRRERREGWRAPPQGATRREWVPRGSAASTSVAHPSNLHSSSNADANQGIPVALPASRVRSNNHGNVSVTSNQGVSVAWSANYGRSNNHATDSVSSNQGVASARPVSHDSSYNHGSDSGSSNQGMVLVPLVNRHRNNNHGSYRTEREMDKGRGENQVGKGFGLGFRDASLPQLVQEIQEKLLKGAVECMICYEMVQRSAAVWSCSSCYSIFHLICIKKWARAPISSDLSVSMEKNQEFNWRCPGCQSVQFTSSKEIRYFCFCGKRIDPPSDLYLTPHSCGEPCGKPLERELLVAGGSGDNLCPHSCVLQCHPGPCPPCKAFAPPRLCPCGKKNITTRCSDRQSVFTCGVCCGKLLVCGRHYCEHICHVGPCDPCKVQINATCFCSKKTDVFPCGDVAVKGEIEAKGGIFSCGSCCLKKLSCGHHVCSEICHPGSCGECEFSPSLVKTCCCGKTRLDNKRQSCLDPIPTCSQVCGKLLPCGVHSCKEACHVGECPPCLVQVSQKCRCGLTSRIVECYKTTMENEKFMCEKICGIKKNCGRHRCSEKCCPFSNPNPHNNYLSGDWVPHFCSMPCGKKLRCGQHVCECLCHSGHCPACFQTIFTELTCACGGTSRLPPQPCGTPPPSCQLPCSIPQPCGHSGSHSCHFGDCPPCSVPVAKECIGGHVVLRNIPCGSKDIRCNHPCGKTRQCGLHACGRTCHSPPCDNLSGVAQGFKTPCGQTCGAPRSCCRHTCKAPCHPSSPCPDIRCEFPVTITCSCGRITANVPCDAGGSSSNYNADAIHEASIIQTLPVPLQPVDTNGKKVPLGQRKLMCDDECTKLERKRVLADAFDITAPNLDSLHFGENPHSFESLSDLFRREPKWVLAVEERCKVLVLGKSRGTTHGLKVHIFCPMLKEKRDAVRLIADRWKLVVNAAGWEPKRFIVISVTPKSKTPARVMGVKGNTSLNVSLPPVFDPLVDMDPRLVVSFPDLPRDADINALVLRFGGECELVWLNDKNALAVFHDPARAATALRRLDHATGYQGAILVASNVGASAASSATNAWGGAGVIKGVLPVSKGNSWKKAVVQDPGRKEDSWGGKEWTAGSVNIQPSVWKKEAPISASLNLWNVLDQESGSSSSFTTVGAEVSGKQNGQSAASTLLFGEEGSSNEEGNLDAASEVVDDWEKAYE 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01412 1170 CDD NF-X1-zinc-finger 682 740 - -
Pste9g01412 1170 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 83 1080 IPR034078 GO:0003700
Pste9g01412 1170 MobiDBLite consensus disorder prediction 1122 1155 - -
Pste9g01412 1170 CDD NF-X1-zinc-finger 473 521 - -
Pste9g01412 1170 MobiDBLite consensus disorder prediction 1 52 - -
Pste9g01412 1170 CDD NF-X1-zinc-finger 629 677 - -
Pste9g01412 1170 MobiDBLite consensus disorder prediction 33 52 - -
Pste9g01412 1170 MobiDBLite consensus disorder prediction 1 17 - -
Pste9g01412 1170 Pfam NF-X1 type zinc finger 541 552 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 Pfam NF-X1 type zinc finger 639 656 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 Pfam NF-X1 type zinc finger 730 749 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 Pfam NF-X1 type zinc finger 582 599 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 Pfam NF-X1 type zinc finger 483 500 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 Pfam NF-X1 type zinc finger 361 379 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 Pfam NF-X1 type zinc finger 692 707 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 Pfam NF-X1 type zinc finger 308 323 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 Pfam NF-X1 type zinc finger 425 442 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 CDD NF-X1-zinc-finger 720 769 - -
Pste9g01412 1170 CDD NF-X1-zinc-finger 351 399 - -
Pste9g01412 1170 CDD NF-X1-zinc-finger 415 458 - -
Pste9g01412 1170 CDD NF-X1-zinc-finger 572 616 - -
Pste9g01412 1170 ProSiteProfiles Zinc finger PHD-type profile. 189 252 IPR019787 -
Pste9g01412 1170 CDD NF-X1-zinc-finger 283 344 - -
Pste9g01412 1170 Gene3D - 957 1029 IPR012677 -
Pste9g01412 1170 SMART znfxneu3 639 657 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 SMART znfxneu3 361 380 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 SMART znfxneu3 306 324 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 SMART znfxneu3 425 444 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 SMART znfxneu3 582 601 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 SMART znfxneu3 483 502 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 SMART znfxneu3 692 722 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 SMART znfxneu3 731 752 IPR000967 GO:0005634|GO:0008270
Pste9g01412 1170 CDD RING-CH-C4HC3_NFX1-like 191 250 - -
Pste9g01412 1170 SUPERFAMILY RING/U-box 182 254 - -
Pste9g01412 1170 MobiDBLite consensus disorder prediction 1122 1170 - -
Pste9g01412 1170 ProSiteProfiles Zinc finger RING-type profile. 192 250 IPR001841 -
Pste9g01412 1170 MobiDBLite consensus disorder prediction 92 128 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Pste9g01412 zf-NF-X1 1.7 No_clan