Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01400 GTAACCAAAAAATGTCCCAGAATAAGATTTTCCAAGATCAATCATCGAATCCGATTCCTGATCTTTCCCTTCACATTAGCCTCCCAAACAGTGGTCCTTCTTCATCACTTTGCACTGAGGGGGATATATGGCCTCAACAAGCAGATGATGCTGAAGGCCACAAGTCTCACAGTGATGGTTCAATCGAGGGTAGTAGCACTTATCACACAGACACACAACTGTCCTTAGCCAACCCCCCCACAAGTACTACTTCTCCATCTGAGGGTGAAAGCACCTGGAGGAAGAGAAACTTTGTTAGACTTTGTCATGGGGTTTCCGAGGGTCAAATAAGACTCATCAATGGAATCCCTCTCTACGCTAACCTTTCTTCTTTGGACAACACTTTTATTCCCTCAATAGAGAGAAACCCCACCAATAAGTTTTCCTTTTCTTCTCTATATGCAGTTCCACACCCTCCTTATTCTGCCAATTCAGCTCCTAATTATACTAATAATGCTGTTGTTGGGGGTGTAGCTGTAGAACCAATCTCAAGGTTTCGTGATATAGCCATGGAGAGTACTCTAAGACCCCAACAGTTTCAGTACTTTGATTACCCTCATCAGCAGCATCAGCATCAGTTTAGGAATGCTACTGATATCGGAGCTTCTGAATTTTCAAATGGATTTGTGAGGTCAAAAATGTTGTCAAGGCCGCAAAGTAATAAGAGGAACATGAGGGCTCCAAGAATGCGTTGGACTAGTTCTCTTCACAATCGCTTTGTTCATGCTGTTGAACTACTTGGTGGCCATGAAAGTGAATCTCTCTTCTCTCCCTCTTTGCTTGTATGCGTGTGTGAGTTCTGCAGGGCTACTCCTAAGTCAGTTTTGGAACTCATGGATGTCAAAGATCTAACACTAGCTCATGTCAAGAGCCATTTGCAGATGTATCGGACTGTTAAGAACACTGACAAACCTGCAGCTTCTTCAGACGGGGATGAGGATTTAATGTCCTTAACAGTACCAAATAGTCAAAATAAGATTTTTTTACCCAATCAGAGAGGGCCTCCAAATGCATCTATGGATCATGATATGGGCTACAGTTCCAGCAATCTATGGGTTAATTCTTCTTCCAGTAATTCATTATATTTTATGAACCCTGTTAAA 1142 0.4229 MSQNKIFQDQSSNPIPDLSLHISLPNSGPSSSLCTEGDIWPQQADDAEGHKSHSDGSIEGSSTYHTDTQLSLANPPTSTTSPSEGESTWRKRNFVRLCHGVSEGQIRLINGIPLYANLSSLDNTFIPSIERNPTNKFSFSSLYAVPHPPYSANSAPNYTNNAVVGGVAVEPISRFRDIAMESTLRPQQFQYFDYPHQQHQHQFRNATDIGASEFSNGFVRSKMLSRPQSNKRNMRAPRMRWTSSLHNRFVHAVELLGGHESESLFSPSLLVCVCEFCRATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDLMSLTVPNSQNKIFLPNQRGPPNASMDHDMGYSSSNLWVNSSSSNSLYFMNPVK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01400 377 Gene3D - 236 310 - -
Pste9g01400 377 SUPERFAMILY Homeodomain-like 234 308 IPR009057 -
Pste9g01400 377 MobiDBLite consensus disorder prediction 1 38 - -
Pste9g01400 377 NCBIfam myb-like DNA-binding domain, SHAQKYF class 278 307 IPR006447 GO:0003677
Pste9g01400 377 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 368 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pste9g01400 377 MobiDBLite consensus disorder prediction 56 88 - -
Pste9g01400 377 MobiDBLite consensus disorder prediction 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01400 Pste-Chr9 13200350 13203851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01400 217 320 G2-like Transcription Factor Family AT5G16560 70.192 6.22e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste9g01400 None None None