Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01394 ATGGATGGCGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCCGCTACTTCGTTTAAGAGTCACCTGGGACTGAAGCTGATGTCTTCCATGCCAGAAAAACCTTTAATCGGAGGGCGCAATGCTGCAGTTTTGTCTGGCACCAATGGGGCATTTCACCACAGGGACATTGGTGGTATGCCCCAATCTACATACCCTATGGAATACATGAGGGATGCATGGATTAGTAGTCAGAGAGAGAAGTATATGAATATGATACCTACAAACCATAATTATGGTGGTATTCCTGAGACATCCTCAGCACATCCAATTCAAATGATTCAAGCGCCCGAATTGCCAAAAGAAGAAAATTCAGTGGAAGAAGCACCTGTTGCCGAGAAGGCAAGTGATAGCACTCGTAAGAAAAGACAGGGGCCCAAGGTGCCCAAATCTCCCAAGGCTAAGAAGCCCAAGAGGGGGCCTCGCGTGCCCAAGGGTGAGAATGTGCCTGCAGTTCAACGTGCAAGGGTTCCAAAGAAAACTACTGAAATTGTAATAAATGGGATTGATATGGATATTTCTAGCATTCCGATTCCGGTTTGTTCATGCACCGGGGCACCTCAACAGTGTTATAGATGGGGCTCTGGTGGCTGGCAGTCTGCATGTTGCACAACAGGCTTGTCGGTGTATCCTTTGCCTATGAGTACCAAGCGCCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTGGAGAAACTTGCAGCCGAGGGCTATAACTTTTCTAATCCCATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATCAGGTAG 855 0.4608 MDGDNGLNIRNWGYYEPATSFKSHLGLKLMSSMPEKPLIGGRNAAVLSGTNGAFHHRDIGGMPQSTYPMEYMRDAWISSQREKYMNMIPTNHNYGGIPETSSAHPIQMIQAPELPKEENSVEEAPVAEKASDSTRKKRQGPKVPKSPKAKKPKRGPRVPKGENVPAVQRARVPKKTTEIVINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCTTGLSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01394 284 PANTHER - 1 284 IPR010409 -
Pste9g01394 284 MobiDBLite consensus disorder prediction 114 171 - -
Pste9g01394 284 MobiDBLite consensus disorder prediction 116 139 - -
Pste9g01394 284 MobiDBLite consensus disorder prediction 140 155 - -
Pste9g01394 284 SMART GAGA_bind_2 1 284 IPR010409 -
Pste9g01394 284 Pfam GAGA binding protein-like family 1 284 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01394 Pste-Chr9 13106911 13107765 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01394 1 284 BBR or BPC Transcription factor family AT2G01930 50.842 1.61e-94 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pste9g01394 GAGA_bind 3.7e-110 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01394 9 13106911 13107765 Pste9g01394 9 13106911 13107765 ECH