Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01392 TGGCGTGCAGACATTTTTGTTCTTTGCTCTCTTCATTTTCCATTCGTAGACGCCAAGAACCCTAGCACAGCAGTGTACATTCACTACATTGTGTCCTTGCAATTATTTTCATCATTTGGTGTTGTAATGGATGGTGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCCGCTGCTTCGTTTAAGAGTCACTTGGGGCTGCAGCTGATGTCTTCCATGCCGGAAAAGCCTTTAATTGGAGGGCGCAATGCCACTGTTTTATCTGGCACTAATGGGGCATTTCACCACAGGGACATTGGCATGCCTCAAGCTACATACCCTATGGAATACATGAGGGATGCATGGATTAGTAGTCAGAGAGAGAAGTATATGAATATGATACCTACAAACCATAATTATGGTGGTATTCCAGAGACATCTTCAGCACATCAAATCCAAATGATTCAAGCACCGGAATTGCCCAAAGAAGAAAAGCCAGTGGAAAAAGCACCTGTTGTTGAGAAGGCAAGTGACAGCACTCGTAAGAAAAGACAGGGGCCCAAGGTGCCCAAATCTCCCAAGGCTAAGAAGCCCAAGAGGGGGCCTCGCGCTCCAAAGGATGAGAATGCGCCTGCAGTTCAACGTGCAAGGCTTCCAAAGAAAACTACTGAAATTGTAATAAATGGGATTGATATGGATATTTCTAGCATTCCGATTCCGGTTTGTTCATGCACCGGGGCACCTCAACAGTGTTATAGATGGGGCTCTGGTGGCTGGCAGTCTGCATGTTGCACAACAGGCTTGTCGGTGTATCCTTTGCCTATGAGTACCAAGCGCCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTGGAGAAACTTGCAGCCGAGGGCTATAACTTTTCCAATCCCATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATTAGTACAACAATTTTCGAAGTCACAAGACATTTCCTGTCCTTCTCTAACTCTTTCTATGTTGTTATCTTCACTTCTTTGGATCTAGTACATTGGAATTCAATCTTTTGGTTGGGGTTGGTTGGTCCTGAGAGGGAACAACCTGATGATATCTTATGCAGTTCAGTTCTTAGAGAAGTAGATTTATTGAATATTGTGACTATGAAGTATCACAAACAGTTAAAGAACTTATGCCTGACAAGACCACCATTGCCTTCTCGATGCTCTATCACCTACTCGGCACTTTATCGTCCACTCGACCCTCTATCGTTCATTCGGAACTCTATCACCAACTCGACGCTCTATCGCATGACATACGCCAAGAACCCTAACAGTTTCTCACCAAAAGATTTGATCTTTCTTAATCTTTTCATGATCAAATCCCAGAAGCTGAAATCTTTTGGCATGAGGTTTTGCATGTCTACATTTATTTATGGGATTTGTGTAATTTACCCCTTTTCTAGTTTGACTTCATTTGAGCTGAAACAAAGGAGAATGCCATGGACTTGGATAATTATGCACATTGTGCCCCTGCAATTATTTTCATCACTTGTTGTGATGGATGGCGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCCGCTACTTCGTTTAAGAGTCACCTGGGGCTGCAGCTGATGTCTTCCATGTCAGAAAAACCTTTAATCGGAGGGCGCAATGCTGCAGTTTTGTCTGGCACCAATGGGGCATTTCACCACAGGGACATTGGTGGTATGCCCCAATCTACATACCCTATGGAATACATGAGGGATGCATGGATTAGTAGTCAGAGAGAGAAGTATATGAATATGATACCTACAAACCATAATTATGGTGGTATTCCTGAGACGTCCTCAGCACATCCAATTCAAATGATTCAAGCGCCCGAACTGCCAAAAGAAGAAAATTCAGTGGAAGAAGCACCTGTTGCCGAGAAGGCAAGTGATAGCACTCGTAAGAAAAGACAGGGGCCCAAGGTGCCCAAATCTCCCAAGGCTAAGAAGCCCAAGAGGGGGCCTCGCGTGCCCAAGGGTGAGAATGTGCCTGCAGTTCAACGTGCAAGGGTTCCAAAGAAAACTACTGAAATTGTAATAAATGGGATTGATATGGATATTTCTAGCATTCCGATTCGGTTTTGTTATAGATGGGGCTCTGGTGGCTGGCAGTCTGCATGTTGCACAACAGGCTTGTCGGTGTATCCTTTGCCTATGAGTACCAAGCGCCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTGGAGAAACTTGCAGCTGAGGGCTATAACTTTTCTAATCCCATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATTAGACCGAGGCTTCTTAGATGGTCTGTAGTACAACAATTTTCGAAGTCACAAGACATTTCCTGTCTTTCTCTAACTCTTTCTATGTTGTTATTTTCACTTCTTTGGATTGAGTACATGGGAATTCTATATTTTGGTTGGTTGGTTGGTCCTGAGAGGGAACAACCTGATGATATC 2562 0.4336 WRADIFVLCSLHFPFVDAKNPSTAVYIHYIVSLQLFSSFGVVMDGDNGLNIRNWGYYEPAASFKSHLGLQLMSSMPEKPLIGGRNATVLSGTNGAFHHRDIGMPQATYPMEYMRDAWISSQREKYMNMIPTNHNYGGIPETSSAHQIQMIQAPELPKEEKPVEKAPVVEKASDSTRKKRQGPKVPKSPKAKKPKRGPRAPKDENAPAVQRARLPKKTTEIVINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCTTGLSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTISTTIFEVTRHFLSFSNSFYVVIFTSLDLVHWNSIFWLGLVGPEREQPDDILCSSVLREVDLLNIVTMKYHKQLKNLCLTRPPLPSRCSITYSALYRPLDPLSFIRNSITNSTLYRMTYAKNPNSFSPKDLIFLNLFMIKSQKLKSFGMRFCMSTFIYGICVIYPFSSLTSFELKQRRMPWTWIIMHIVPLQLFSSLVVMDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMSEKPLIGGRNAAVLSGTNGAFHHRDIGGMPQSTYPMEYMRDAWISSQREKYMNMIPTNHNYGGIPETSSAHPIQMIQAPELPKEENSVEEAPVAEKASDSTRKKRQGPKVPKSPKAKKPKRGPRVPKGENVPAVQRARVPKKTTEIVINGIDMDISSIPIRFCYRWGSGGWQSACCTTGLSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIRPRLLRWSVVQQFSKSQDISCLSLTLSMLLFSLLWIEYMGILYFGWLVGPEREQPDDI 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01392 854 PANTHER - 43 324 IPR010409 -
Pste9g01392 854 Pfam GAGA binding protein-like family 523 797 IPR010409 -
Pste9g01392 854 Pfam GAGA binding protein-like family 43 324 IPR010409 -
Pste9g01392 854 MobiDBLite consensus disorder prediction 662 677 - -
Pste9g01392 854 MobiDBLite consensus disorder prediction 153 214 - -
Pste9g01392 854 MobiDBLite consensus disorder prediction 636 692 - -
Pste9g01392 854 MobiDBLite consensus disorder prediction 638 661 - -
Pste9g01392 854 MobiDBLite consensus disorder prediction 181 195 - -
Pste9g01392 854 SMART GAGA_bind_2 523 797 IPR010409 -
Pste9g01392 854 SMART GAGA_bind_2 43 325 IPR010409 -
Pste9g01392 854 MobiDBLite consensus disorder prediction 156 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01392 Pste-Chr9 13081566 13090403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01392 523 797 BBR or BPC Transcription factor family AT2G01930 48.148 7.74e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pste9g01392 GAGA_bind 1.4e-109 No_clan