Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01384 CTAGTAAGAGATAATATGTGCAGTAGAGGTCATTGGAGGCCAGCTGAAGATGAGAAGCTTCGAGAATTGGTCGATCGCTATGGACCTCATAATTGGAACGCCATAGCTGAGAAGCTCCGAGGAAGATCAGGGAAAAGCTGTAGGTTGAGATGGTTCAATCAATTGGACCCAAGAATAAACAGAAGTCCTTTCACAGAGGAGGAAGAAGAGCGACTTCTAGCTTCTCACAGGATTCATGGCAATAGGTGGGCTGTAATAGCAAGACACTTCCCAGGAAGAACTGATAACGCTGTCAAAAATCATTGGCATGTGATGATGGCAAGGCTTAGGAGAGAAAGGTCTAAAATTTACAACACAAAACACCCTCTTTTCCCTCCAAACTTGCACGACCTTAAGACAATCCCTTCTTTTGTCGACAAGTATTGTGAAAAATACAGCCACCATCCGTGTAGTCCTTTTCAATTCTCTAAGAAGTTTTACTTTCAAGATCCAACTTCTTCCACAGTGCCTCCAGACAGGAGTGAATTGGTAGAGTTCTATGATTTTCTTCAAGTAAATACCGATTCGAATAAAAGTGAAGTGACAGACAATGCGAGAAGAGACGAGGAAGAAGTGAGTCAAGATGGTTTGCGAGAGAAGAATAAGGACAATGCTGTTCCATTCATTGATTTTTTGTCTACTGGAGGAGCCTGCTAACATATATATATAATTGCCAA 716 0.4176 LVRDNMCSRGHWRPAEDEKLRELVDRYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARLRRERSKIYNTKHPLFPPNLHDLKTIPSFVDKYCEKYSHHPCSPFQFSKKFYFQDPTSSTVPPDRSELVEFYDFLQVNTDSNKSEVTDNARRDEEEVSQDGLREKNKDNAVPFIDFLSTGGAC 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01384 231 PANTHER MYB PROTEIN-RELATED 9 189 - -
Pste9g01384 231 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Pste9g01384 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Pste9g01384 231 SUPERFAMILY Homeodomain-like 9 102 IPR009057 -
Pste9g01384 231 Pfam Myb-like DNA-binding domain 12 72 - -
Pste9g01384 231 SMART sant 8 57 IPR001005 -
Pste9g01384 231 SMART sant 60 108 IPR001005 -
Pste9g01384 231 MobiDBLite consensus disorder prediction 190 212 - -
Pste9g01384 231 MobiDBLite consensus disorder prediction 193 212 - -
Pste9g01384 231 FunFam MYB transcription factor 9 60 - -
Pste9g01384 231 Gene3D - 62 122 - -
Pste9g01384 231 CDD SANT 63 106 IPR001005 -
Pste9g01384 231 CDD SANT 12 53 IPR001005 -
Pste9g01384 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 55 IPR017930 -
Pste9g01384 231 ProSiteProfiles Myb-like domain profile. 9 55 IPR001005 -
Pste9g01384 231 Gene3D - 9 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01384 Pste-Chr9 12866776 12869181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01384 6 231 MYB Transcription Factor Family AT1G17950 57.769 3.80e-88 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste9g01384 Myb_DNA-bind_6 2.5e-16 CL0123