Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01381 GTGAATTCGATACGCGGTCCCCACTACCGAGGGTTCTTGAAGGAATTCTGTAACTTTATCTTTACCTTGATTGCAGGGAATTTATCCTTCTGGACTCTACCTATATTGAACTGTTAACTGAAGTGCTTCTTCTTCCTTATTATATCCTATTAAATATTACTAAACTAAAAGAGAAAATTCCCACCTTCTAATTCTCATATAAGTGCTGACCCTCTGTCCTCTGTCTTCATAGTTCAGAGTTACACTCTGAAGAAAGCATCCAAAATGGTGCTTACGTCCACTGTCACACACCCAGATGAACAAGGACAGACCCTATGCTCTACTTTTGCTTCCAGATATGTGCGTGAACCTATTCCTAGGTTCAAGATGCCAGATAATTCCATACCAAAGGATGCTGCTTATCAGATAATAAACGATGAGTTGATGCTGGATGGCACACCAAGGCTAAACTTGGCTTCGTTTGTGACAACTTGGATGGAGCCTGAGTGTGACAAGCTTATAATGGCTTCACTCAACAAGAACTATGTTGATATGGATGAGTACCCTGTCACCACTGAGCTCCAGAACCGGTGTGTTAATATTATAGCAAATCTATTCCATGCTCCTATAAGTGAAGAGGAGACTGCAGTAGGTGTGGGCACTGTCGGGTCTTCAGAGGCAATAATGTTAGCAGGTCTGGCTTTTAAAAGGAAATGGCAAACAAAGAGAAAAGTAGAAGGCAAACCATATGATAAGCCCAACATAGTTACTGGGGCTAATGTGCAGGTTTGTTGGGAAAAATTTGCAAGGTACTTTGAGGTAGAGCTCAAGGAAGTGAAACTCACTGAGGGATACTATGTGATGGACCCTGTGAAAGCAGTTGAAATGGTAGATGAGAACACCATTTGTGTTGCAGCCATATTGGGATCAACTATGACTGGGGAGTTTGAGGATGTGAAGCTCCTCAGTGAACTTCTCACTGAAAAGAACAAGGAGACAGGTTGGGATACCCCAATTCACGTAGATGCTGCCAGTGGTGGGTTTATTGCCCCATTTCTCTATCCTGATCTAGAGTGGGACTTCCGTTTACCTTTGGTGAAAAGCATTAATGTTAGTGGTCACAAGTATGGTCTTGTCTACCCTGGTGTTGGTTGGGTTGTCTGGAGGAGCAAGGATGACTTGCCAGATGAGCTTGTTTTCCATATAAATTATCTCGGATCTGATCAGCCAACTTTCACATTGAATTTTTCCAAAGGATCTAGTCAAATTATTGCTCAATATTATCAATTTATTCGGCTTGGCTTTGAGGGTTACAAAAATATCATGGAGAATTGCTTGGAGAATGCAAGAGTTCTGAAGGAAGGAATTGAGAGAGCAGGGCGGTTTAACATCATCTCGAAGGATATAGGGGTGCCACTTGTGGCCTTCTCTTTGAAAGACAGTAGCCAACACACAGTATTTGAGATATCAGACCATCTGAGAAAATTTGGGTGGATAGTTCCGGCCTATACAATGCCACCAGACGCCCAACACATAGCAGTTCTGCGGGTGGTGATCAGGGAGGATTTCAGCCGCGGCTTGGCTGAGAGACTTGCTCTTGACATAGAAAAAGTTGTGAAGCTCTTGGACACCCTTCCAAGCCCCCTCACTACCAAAACTGCCCATGTCACAGCCATCACTAGTGAGACTACTGAGAAGGTCAAGAAGAGTGCAATAGAGACTCAAAGAGAGATTGCTTTGTACTGGAAGCGACTTGTGGATGTTGATGCTGGATGGCGCACCAAGGCTCAACTTGGTCTCCTTTGTGACCACTTGGATGAGCCTGACTGTGAAAAGCTCATAATGGCTTCACTTAACAAGAACTATGTTGACATGGATGAGTATCCTGTCACCACTAAGCTCCAGAACCAGTGTGTTAATATAATAGAAAATTTATTCCATGCTCCTCTAAGTGAAAATGAGACTGCAATAGTGTGGGAACTGTGGGTCATCAGAGACAATAATGTTAGCAGGAAATGGCAGGCAAAGAGCAAAGCAGAAAGCAAACCTTATGATAAGCCCAATATAGATACTGGGGCTAATGTGCAGAATCAAAGATCTAGTGAAATTATTGCTCAATATTACCAATTTATCAGGCTCGACTTTGAGAGTTACAAAAATGTGATGGAAAATTGCTTGGCAAATGTAAGAGCTCTAAAGGAAGGAATGGAGAGAATAGGAAGGTTTAAGATAATCTCGAAGGATGCAGGAATGCCACTCGTGGCATTCTCCTTGAAAGACAATAGCAAGCACCCAGTGTTTGAGATAGCAGATGAGTTGAGAAAATATGGGTGGATAGTTCCAGCCTATACAATGCCACCAGATGCGCAACACGTGGAAGTCCTGAGGGTGGTGGTGAGGGACGATTTCAACCGTGGCTTGGCCGATAGACTTATTTCTGACATTGACAAGGTTGTGAAGCACTTGGACACACTCCACTTTGTAACTACCAAAGCTTCTCATGTCACACCTTTCAGGGCTAAGAAGAGTGCAATAGAGATTCAGCAAGAGATTGTTTGTACTGGAAGAGACTCGTGGATGGCAAGAAGAAACGTGGAGTATGCTAGCTAGGCTTGCTAACCTTCCTTCTTGGAGTTGATGTATCTACTGCTTTATCGTCTATTAATTTGCATGTGTGTACCAATAAGCAATGCCAAAAGCCTTTGCATGTTGCATCCTAGTAGCTAGTCATTGTTGTTCTTGCCTAGGAGACTTTTTTTTTAAGTGCTACTCATGGAAAGACACAATTATCATATAATGGATGAGGTATCTTTATTAGAGATGAAGGAAAAGAGAAGTGGAGAAAAATACTT 2831 0.426 MVLTSTVTHPDEQGQTLCSTFASRYVREPIPRFKMPDNSIPKDAAYQIINDELMLDGTPRLNLASFVTTWMEPECDKLIMASLNKNYVDMDEYPVTTELQNRCVNIIANLFHAPISEEETAVGVGTVGSSEAIMLAGLAFKRKWQTKRKVEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGYYVMDPVKAVEMVDENTICVAAILGSTMTGEFEDVKLLSELLTEKNKETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCLENARVLKEGIERAGRFNIISKDIGVPLVAFSLKDSSQHTVFEISDHLRKFGWIVPAYTMPPDAQHIAVLRVVIREDFSRGLAERLALDIEKVVKLLDTLPSPLTTKTAHVTAITSETTEKVKKSAIETQREIALYWKRLVDVDAGWRTKAQLGLLCDHLDEPDCEKLIMASLNKNYVDMDEYPVTTKLQNQCVNIIENLFHAPLSENETAIVWELWVIRDNNVSRKWQAKSKAESKPYDKPNIDTGANVQNQRSSEIIAQYYQFIRLDFESYKNVMENCLANVRALKEGMERIGRFKIISKDAGMPLVAFSLKDNSKHPVFEIADELRKYGWIVPAYTMPPDAQHVEVLRVVVRDDFNRGLADRLISDIDKVVKHLDTLHFVTTKASHVTPFRAKKSAIEIQQEIVCTGRDSWMARRNVEYAS 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01381 774 Gene3D - 644 730 - -
Pste9g01381 774 Gene3D - 364 451 - -
Pste9g01381 774 Gene3D - 1 68 - -
Pste9g01381 774 SUPERFAMILY PLP-dependent transferases 9 446 IPR015424 -
Pste9g01381 774 FunFam Glutamate decarboxylase 7 68 - -
Pste9g01381 774 Pfam Pyridoxal-dependent decarboxylase conserved domain 603 664 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pste9g01381 774 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 384 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pste9g01381 774 CDD DOPA_deC_like 62 442 - -
Pste9g01381 774 PANTHER GLUTAMATE DECARBOXYLASE 511 601 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pste9g01381 774 SUPERFAMILY PLP-dependent transferases 604 727 IPR015424 -
Pste9g01381 774 FunFam Glutamate decarboxylase 364 451 - -
Pste9g01381 774 FunFam Glutamate decarboxylase 69 363 - -
Pste9g01381 774 SUPERFAMILY PLP-dependent transferases 486 594 IPR015424 -
Pste9g01381 774 Gene3D - 69 363 IPR015421 GO:0003824
Pste9g01381 774 Gene3D - 510 603 IPR015421 GO:0003824
Pste9g01381 774 FunFam Glutamate decarboxylase 644 731 - -
Pste9g01381 774 NCBIfam glutamate decarboxylase 19 447 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01381 Pste-Chr9 12819293 12837046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01381 605 768 Calmodulin-binding Proteins AT5G17330 54.286 1.39e-50 183