Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01378 AATCATCAAGAGAACATGGCTCATTTTGAAAAAGATGAGACACCGATGCTGTCGGAATCAAATGCTCAACTATCTAATGAAGTCAGGGATTCTAATTTCCGAAGGCTTGTATCTAGGACACGAAGTGCTTCAATTTCTATTCCTATGGCCTCCTTCGAATCATATGAGAAAGAAACTAATCTTGTGGGACACACTGGTCCGCTTCGTAGTGTGAGAAAAACCCCCTTTGTGCAGATGAGTGGTCCACTGTATCCTACAAATGGAACTGGAAATCTTTCACGACAGAATATAGTAGTGCCAGGAACCAACGGAGTGGAGAGTAAGACAGAAAAATTTTCTACTTACGATGGCTCAAATGAAAATCATTGGGATAACAACTATGATAGAAAGAATGAACACTTAATGAGGTCTGGACAACTGGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTACTTATTTCAAGGCTTCTCAGCCAAGAACTCGAAAGGCCTCAACTATGTTTGATACCAAGTTCCACAATAATCTTTATGGGGATGCCAAGGGTTTTGGAAGAAAACTTTTTTCCTCCTGCTCTACATATGTTCCTGGAGTTATGAATCCTCATGCAAAAGTTGTACAACAATGGAATAAGATTTCAGCCATTTTTTGCTTGATTGCAATTTTTGTTGATCCATTATTTTTCTTCTTAATCTATGTGAAGAAGGAAAATAAATGTATTGCTATCAATTGGACAATGACAACAACACTTGTTTGTTTTAGAAGCATTAATGATTTGATGTATTTCTTTAACATTCTTCTCCAGTTTAGGTTGGCTTATTTCTCTCGTGAGTCAATGGTAGTAGGCGCTGGAGATTTAGTTGACCATCCCAAGAAAATTGCCCTTCATTATCTGAAGGGTTATTTTTTTATTGATCTATTTGTTGTTTTTCCTCTTCCTCAGATAATGATATTATTTATCCTACCAAAGTCCCTGGGATCATCAGGAGCAAATTATGCTAAAAACCTTCTGCGTGCAGCAATCCTTGTGCAGTATTTTCCCAGATTATTCAGGTTTCTGCCTCTGTTAATTGGCCAGTCTCCAACAGGATTCATATTTGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTCATTTTTATGCTATCTGGCCATGTTGTTGGTTCTTTCTGGTACCTCTTTGGGCTACAGAAGTCAGATTTGTGGAATCTTAATGAAAATGCCACTGCTTGTTTGAATTCCAGTTCCGGTATTTTTGAATATGGAATTTATCAACATGCTGTACCACTTACTATAGAAACCAGGGTGGTCAACAAATATGTATTTGCACTGTTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGTAATCAAACCCCTAGCTATTTTGTGTGGGAAGTCCTTTTTACAATGGCCATCATAGGGTCAGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAGAACTTTCTTCAAGCTCTTGGACGCAGGAGAGTAAGGCAGGCTGAACGGTATAGTTGGGCTGCAACAAGGGGGGTGAATGAAGAAATGCTTCTCGAGAATTTGCCAGAAGATCTCCAGACAGACATAAGGCGTCATCTCTTCAAATTTGTTAAGAAAGTTCGAATCTTTGCCCTGATCCTGAAGGATGAGCCTATCTTAGATGCCATTTGTGAAAGACTAAAACAAAAGACATACATCAAAGGAAGTAAAGTTTTGAGTCGTGGTGGTCTTGTAGAGAAGATGGTCTTTGTTGTACGTGGGAAATTGGAGAGCTTTGGAGATGATGGAAATATCGTTCCCTTATCTGAAGGTGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAGCATTCTTCTGTAAGCACAGATGGTAAAAAAGTAAGGGTTCAAGGGCAGAGGTTGCTAAGCAACAGAACTATAAGATGCTTAACAAACGTGGAGGCATTTTCCCTTCGCGCTGCAGACCTTGAGGAACTCACAATTCTTTTCACAAGATTCTTGCGGAACCCTCATATTCAAGGAGCACTAAGGTATGTATCACCTTATTGGAGATCCCTTGCAGCAAACCGTATTCAGGTTGCATGGAGATACAGGAAGAAGCGTCTAAGTCCGAAGAAGATGAGATTCACGTTGAGCAGAGCACAGGGAGGTGGCAGCTCAAAAACTAGTAGAGAACCTAAAAAGAATCAACAAGGAAACATGGCTAATTTTGAAATGGATGGGGAGCCAGGGCCATCAGAAAGACATGCACAACATAATGGAGTTGAGAATTGTAGGTTTGGGAATGTTGTATCAAGGACAAGAAGTGCATCAATTTCTATTCCTATGGTGGCCATGAAGGCATATGAGAGAGAAACCAGTCTTGTGGGACATACTGATCCACTTCCTAGTGTGAGAAAATCCCCCTTAATGCATGTGTATAATCCAGTATATGCCGCCAATGGAACTCAAAATCATTTGCATCAGAGTATAGTTGTGAAAGGAAACAAAGTAGTGGAAAGCAAGACAGAAAAAATGTCTACTCTGGAAAGGACAGATGAAAATAATTGGAATAACAGGTATGATAGAAAGAATAAACACTTGCTGAGGTCTGGAACACTGGGAATGTGTGATGATCCTTATTGTACCACTTGTCCCACTTACTTCAAGGCCTCTATGGAAAGACTTTCAAAAGCTTCCTCTGTTTTTGATCCTCAGTTTCAATTCCACAATGCTCTTTATGGGGATGCCAAGGGTTTTGGGAGAAAATTTGTTTCTTTCTGCTCTTCATATGTTCCTGGAGTTGTGAATCCTCACTCAAAAGTTGTACAACGATGGAACAAGTTTTTGGCCATTTTTTGCATGGCGGCAATTTTTGTGGATCCATTATTTTTGTTCTTAATCTATGTGCAGAAGCAAGATAAATGTATTTCTATCGACTGGTACATGACAAAAGTTCTTGTTGTAGTAAGAAGCATTAATGATGTGGTATATTTCTTGAACATTCTTCTCCAGTTTAGGTTGGCCTATGTTTCTCCAGAGTCTAAGGTGGTTGGTACAGGAGATTTAGTTGATCATCCCAAGAAAATTGTTCTTCATTACCTGCAGGGTTATTTTCCTATTGACTTGTTTGTTGCATTTCCTCTTCCTCAGATAATGATAATTTTGGTCCTACCAAAACACTTGGGGTTATCAGGAGCAAACTACGCCAAGAATCTTCTGCGTGCAGTGATCCTTGTGCAGTATATTCCCAGATTATTCAGGATTCTGCCTTTCCTGATTGGCCAATCTCCAACAGGATTTATATTTGAGTCAGCTTGGGCAAATTTCATTATAAATCTTCTCATTTACATTCTTGCTAGCCATGTTGTTGGCTCTTGCTGGTATCTCTTTGGTCTACAGAGGGTTAATCAATGCTTGCGAGATGCCTGTGGTAATTCTCCTATTGATGTATGCATGGCAGTCATTGATTGTGGACATGGTCATATAAGAAACAGCCAATCTGATCAAGCATCAGCTCTCTGGAGCAACAATGCAAATGCTATTGCTTGTTTGAATCCCTCCTCGAGTGGTTTCAGTTATGGAATCTATGTTAATGCTGTACCTCTTACTATGGAAACTAGTCTGGCTAACAAATATATTTATTCTCTGTTTTGGGGATTCCAGCAAATCAGTACTCTTGCTAGTAGTTTAGTCCCAAGCAATTTTTGGGGGGAAGTCCTTTTTACAATGGCCATCATAGGATTGGGACTCTTGCTTTTTGCAGTTCTCATTGGAAACATACAGAACTTTCTTCAAGGTCTTGGACGGAGAAGGCTAGAAATGCAACTTAGAGGCCGCGATGTTGAGCAATGGATGAGCCATCGTCACTTACCAGAAGATCTAAGAAGGAAAGTACGAAAGGCTGAACGATATAATTGGGCTGCAACAAAGGGAGTGAATGAAGAAATGCTTTTAGAGAATTTGCCAGAAGATCTCCAGAGGGACATAAGACGTCATCTATTCAAATTTGTTAAGAAAGTCCGAATTTTCACCCTGATGGATGAGCCTATCTTAGATGCCATTTGTGAGAGACTGAGACAGAAGACATACATCAAAGGAAGTATAATTTTGAGTCGAGGTTGTCTAGTAGAGAAGATGATCTTTATTGTGCGAGGAAAATTGGAGAGCATTGGAGAAGATGGAATTGGAGTTCCCTTGTGTGAAGGAGATGCTTGTGGTGAAGAACTTCTGACATCGTATCTCGAACATTCTTCTGTAAGCACAGATGGTAAAAAAGTAAGACTTCCAGGACAGAGGTGGCATAGCAACAGGACAGTAAAGTGCTTAACAAATGTGGAGGCTTTTTCTATCAGAGATGTAGATCTTGAAGAAGTCACAACCCAGTTCATAAGATTCTTGCGGAATCTTCGGGTTCAAGGATCCTTAAGGTATGAATCACCTTACTGGAGATCCTTGGCAGCAACTCGAATTCAAGTTGCATGGAGATATAGGAAGAAATGTAAAAGTCATAATGAAAATAAATCATTGGAGAGGAAAGAAAATTGTTTTGTCAACACTAAACTAACCCGAGCTGATGGTAAGAAGTTGGCGAATATATTAGAGTATTGTCAATACATTATTAAATTTATCTATTATGTATTTACATATCCATTAGAGAGAAGTTGGAGGGAAATGTTGCCAAATTTAACATTTAAACATTCAGATAGTGCAGCAATCAAGCTCTCAACGTACAAATTGCATATCAATGCAAAACAAATTTTCCCAGTTCATGCATCAAGTGGCGTAAATTCAAGAAATGCTTATTTTACTTTTCTCTACAGGTGGCGTAAG 4824 0.3941 NHQENMAHFEKDETPMLSESNAQLSNEVRDSNFRRLVSRTRSASISIPMASFESYEKETNLVGHTGPLRSVRKTPFVQMSGPLYPTNGTGNLSRQNIVVPGTNGVESKTEKFSTYDGSNENHWDNNYDRKNEHLMRSGQLGMCNDPYCTTCPTYFKASQPRTRKASTMFDTKFHNNLYGDAKGFGRKLFSSCSTYVPGVMNPHAKVVQQWNKISAIFCLIAIFVDPLFFFLIYVKKENKCIAINWTMTTTLVCFRSINDLMYFFNILLQFRLAYFSRESMVVGAGDLVDHPKKIALHYLKGYFFIDLFVVFPLPQIMILFILPKSLGSSGANYAKNLLRAAILVQYFPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSFWYLFGLQKSDLWNLNENATACLNSSSGIFEYGIYQHAVPLTIETRVVNKYVFALFWGFQQISTLAGNQTPSYFVWEVLFTMAIIGSGLLLFALLIGNIQNFLQALGRRRVRQAERYSWAATRGVNEEMLLENLPEDLQTDIRRHLFKFVKKVRIFALILKDEPILDAICERLKQKTYIKGSKVLSRGGLVEKMVFVVRGKLESFGDDGNIVPLSEGDACGEELLTWYLEHSSVSTDGKKVRVQGQRLLSNRTIRCLTNVEAFSLRAADLEELTILFTRFLRNPHIQGALRYVSPYWRSLAANRIQVAWRYRKKRLSPKKMRFTLSRAQGGGSSKTSREPKKNQQGNMANFEMDGEPGPSERHAQHNGVENCRFGNVVSRTRSASISIPMVAMKAYERETSLVGHTDPLPSVRKSPLMHVYNPVYAANGTQNHLHQSIVVKGNKVVESKTEKMSTLERTDENNWNNRYDRKNKHLLRSGTLGMCDDPYCTTCPTYFKASMERLSKASSVFDPQFQFHNALYGDAKGFGRKFVSFCSSYVPGVVNPHSKVVQRWNKFLAIFCMAAIFVDPLFLFLIYVQKQDKCISIDWYMTKVLVVVRSINDVVYFLNILLQFRLAYVSPESKVVGTGDLVDHPKKIVLHYLQGYFPIDLFVAFPLPQIMIILVLPKHLGLSGANYAKNLLRAVILVQYIPRLFRILPFLIGQSPTGFIFESAWANFIINLLIYILASHVVGSCWYLFGLQRVNQCLRDACGNSPIDVCMAVIDCGHGHIRNSQSDQASALWSNNANAIACLNPSSSGFSYGIYVNAVPLTMETSLANKYIYSLFWGFQQISTLASSLVPSNFWGEVLFTMAIIGLGLLLFAVLIGNIQNFLQGLGRRRLEMQLRGRDVEQWMSHRHLPEDLRRKVRKAERYNWAATKGVNEEMLLENLPEDLQRDIRRHLFKFVKKVRIFTLMDEPILDAICERLRQKTYIKGSIILSRGCLVEKMIFIVRGKLESIGEDGIGVPLCEGDACGEELLTSYLEHSSVSTDGKKVRLPGQRWHSNRTVKCLTNVEAFSIRDVDLEEVTTQFIRFLRNLRVQGSLRYESPYWRSLAATRIQVAWRYRKKCKSHNENKSLERKENCFVNTKLTRADGKKLANILEYCQYIIKFIYYVFTYPLERSWREMLPNLTFKHSDSAAIKLSTYKLHINAKQIFPVHASSGVNSRNAYFTFLYRWRK 1608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01378 1608 CDD CAP_ED 552 663 IPR000595 -
Pste9g01378 1608 ProSiteProfiles cAMP/cGMP binding motif profile. 1340 1408 IPR000595 -
Pste9g01378 1608 ProSiteProfiles cAMP/cGMP binding motif profile. 552 615 IPR000595 -
Pste9g01378 1608 MobiDBLite consensus disorder prediction 1 15 - -
Pste9g01378 1608 Gene3D Helix hairpin bin 1268 1332 - -
Pste9g01378 1608 Gene3D Helix hairpin bin 496 537 - -
Pste9g01378 1608 SUPERFAMILY cAMP-binding domain-like 498 667 IPR018490 -
Pste9g01378 1608 SUPERFAMILY cAMP-binding domain-like 1268 1467 IPR018490 -
Pste9g01378 1608 MobiDBLite consensus disorder prediction 712 759 - -
Pste9g01378 1608 MobiDBLite consensus disorder prediction 717 740 - -
Pste9g01378 1608 MobiDBLite consensus disorder prediction 1 24 - -
Pste9g01378 1608 Pfam Ion transport protein 945 1267 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste9g01378 1608 Pfam Ion transport protein 213 498 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste9g01378 1608 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 874 1517 - -
Pste9g01378 1608 CDD CAP_ED 1340 1467 IPR000595 -
Pste9g01378 1608 Gene3D - 944 1264 - -
Pste9g01378 1608 Gene3D - 211 495 - -
Pste9g01378 1608 SUPERFAMILY Voltage-gated potassium channels 935 1268 - -
Pste9g01378 1608 Gene3D Jelly Rolls 543 669 IPR014710 -
Pste9g01378 1608 Gene3D Jelly Rolls 1338 1462 IPR014710 -
Pste9g01378 1608 SMART cnmp_10 547 665 IPR000595 -
Pste9g01378 1608 SMART cnmp_10 1340 1475 IPR000595 -
Pste9g01378 1608 SUPERFAMILY Voltage-gated potassium channels 205 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01378 Pste-Chr9 12709432 12741168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01378 7 625 Ion Channels AT3G17700 56.223 0.0 727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01378 9 12709432 12741168 Pste9g01378 9 12709432 12741168 ECH