Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01375 ATGACAACTAAGCTCTTGTACACTTTATATAATATGCTGCTGCTTGGTTGGAAGCAGGACCAAATAGAAAGCACGGGAACCACCGTATTTGGCTCAACTAGTAGCTGTCACACCAATGGTGGAAAGCAATCTGAAAATGTTGCTCATATACCTTCTCTTGGAAACAACCACACTCCCAAGGTGAGGAAACAATATACCATTACTAAACAAAGGGAGAAGTGGACAGAGGAAGAGCATCAAAAGTTCCTTGAAGCTTTGAAATTGTATGGCCGTGGCTGGCGCCAAATTGAAGGTAAACTCCTTGCTGGTGATTTGTTAATCAGAAACAAATGA 333 0.4174 MTTKLLYTLYNMLLLGWKQDQIESTGTTVFGSTSSCHTNGGKQSENVAHIPSLGNNHTPKVRKQYTITKQREKWTEEEHQKFLEALKLYGRGWRQIEGKLLAGDLLIRNK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01375 110 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 110 IPR017930 -
Pste9g01375 110 Gene3D - 73 103 - -
Pste9g01375 110 Pfam Myb-like DNA-binding domain 71 96 IPR001005 -
Pste9g01375 110 ProSiteProfiles Myb-like domain profile. 66 110 IPR001005 -
Pste9g01375 110 NCBIfam myb-like DNA-binding domain, SHAQKYF class 69 96 IPR006447 GO:0003677
Pste9g01375 110 PANTHER SWI/SNF COMPLEX-RELATED 42 97 - -
Pste9g01375 110 MobiDBLite consensus disorder prediction 33 62 - -
Pste9g01375 110 CDD SANT 73 96 IPR001005 -
Pste9g01375 110 SUPERFAMILY Homeodomain-like 60 99 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01375 Pste-Chr9 12602335 12603022 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste9g01375 Myb_DNA-binding 5.1e-07 CL0123