Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01373 CTTAAAACATGAACCCCGTCGTTGCAATGGCCAACAACGTAGTTGTTAAGGTTGCTGCTGTTTCTCTTTCTCCATTGCCCATAACAAATAATGCTCTCACTTTCAGCCAAAGACACACACTTCATCTGAATTGTTCTCAGAACAAAAACAGAACAATCTCATTCCCTTCTTCATTTTCAATCTCATCATCTCCCCTTTCAAACAAAACTAGTTCCTCTGTCTTGGCGTGTCTCCCTGAGTCCTCAACCTCATCTGCTGCTGCTAAACCCTCTTTTTCTTTTCCTCCAACTAAGCTTTACGTCAGTGGGCTATCATTTCGTACCACGGAAGAGAGCTTGCGAAATGCATTTGAGAATTTTGGTCAACTTGTGGAAGTCAAGCTGGTGATGGATAAAATTGCTAACAGACCAAGAGGGTTTGCTTTTCTTCGTTATGCAACTGAAGAAGAATCTCAGAAGGCTATTGAAGGAATGCATGGAAAGTTTCTGGATGGTAGGGTCATATTTGTCGAAGTTGCCAAACCGAGATCAGAGGTACGGCAAAGATTCAAGGAAGACAGAAGATTGTAATGAAAATACATTAACCACATGTTCATCTTGGTGTGCAATAGGCAGAAACATTGTAGCATTGTACTTGACACTTTATAAAATATCCCTCCTTGATTAAACTTTTTTTTCTAGCTCCTTTATTTTTCACCCAACTCCCACCCTGAAACTTCTTTAAGCACCAAGCGTCATTGACAGTGTTTCCTCAATGTCAATGGCGTTCCCTGATGTAATTGTTATACGAAATTAGAATTTTGCTTGCTGACTTGTCATCAAT 822 0.4015 MNPVVAMANNVVVKVAAVSLSPLPITNNALTFSQRHTLHLNCSQNKNRTISFPSSFSISSSPLSNKTSSSVLACLPESSTSSAAAKPSFSFPPTKLYVSGLSFRTTEESLRNAFENFGQLVEVKLVMDKIANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKPRSEVRQRFKEDRRL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01373 186 FunFam Organelle RRM domain-containing protein 6, chloroplastic 79 185 - -
Pste9g01373 186 SUPERFAMILY RNA-binding domain, RBD 85 180 IPR035979 GO:0003676
Pste9g01373 186 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 94 172 IPR000504 GO:0003723
Pste9g01373 186 Gene3D - 44 185 IPR012677 -
Pste9g01373 186 SMART rrm1_1 95 168 IPR000504 GO:0003723
Pste9g01373 186 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 96 165 IPR000504 GO:0003723
Pste9g01373 186 PANTHER NUCLEOLAR PROTEIN 8 73 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01373 Pste-Chr9 12594283 12597792 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01373 96 186 Eukaryotic Initiation Factors Gene Family AT2G36660 30.769 5.40e-10 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01373 9 12594283 12597792 Pste9g01373 9 12594283 12597792 ECH