Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01371 AAAGAAAGGAAGAAGAAAAAAATGTCACCGGTTGGATTACCACCTGGCTTTAGGTTCCATCCAACCGATGAAGAGCTTGTCAACTATTATCTCAAGAGGAAGATCAATGGCCAAGAAATTGAGCTTGATATCATTCCTGAAGTTGATCTCTACAAATGTGAACCATGGGAATTAGCAGAGAAATCATTTTTGCCAAGTAGAGACCCAGAGTGGTATTTTTTTGGACCCCGGGATAGGAAATATCCGAATGGGTTTAGAACAAATAGAGCAACTCGTGCAGGGTACTGGAAAAGCACTGGAAAAGATAGGAGAGTTTCATGCCAAAGCAGACCTATTGGTATGAAGAAGACCTTGGTGTACTACAGAGGCAGAGCTCCTCAAGGGATCAGAACTGACTGGGTAATGCATGAGTATCGCCTTGATGACAAAGAGTGTGAGGACACCTCTGGATTACAGGATACTTATGCATTGTGCCGCGTGTTCAAGAAAAATGGAATCTGTTCTGATATCGAAGAGCAAGGACAATGTAGTATATCACTAATTGAGACCTCCCAAACCATAATTAACGAGTGTGAAACCATGTCACCTGACATACCAGGGGCATCATCATCATGCTTGGAAGAGGAGGACAAAGATGATTCATGGATGCAGTTCATTACAGAAGATGCATGGTATTCTTCTAATGCAGCTATGGTTGGTGGTGAAGAAGTGTCACATGTTACATTTACAAACTAATATTTTGCAGACCTAATGGCAGA 758 0.4182 MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSCQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDTSGLQDTYALCRVFKKNGICSDIEEQGQCSISLIETSQTIINECETMSPDIPGASSSCLEEEDKDDSWMQFITEDAWYSSNAAMVGGEEVSHVTFTN 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01371 237 FunFam Nac domain-containing protein 86 15 159 - -
Pste9g01371 237 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Pste9g01371 237 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Pste9g01371 237 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 177 - -
Pste9g01371 237 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Pste9g01371 237 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01371 Pste-Chr9 12574346 12577758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01371 1 226 NAC Transcription Factor Family AT3G17730 76.763 1.32e-133 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste9g01371 NAM 9.3e-40 No_clan