Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01370 TTTCATTTCTCTCTCTTACTTACACAAATCCCACTCCTCTTCGTTTCTTCACTACACTGCCCTTTCCATCGCTCTGCGTTTAAACCTTCCTTTTCCTCTCAGTTTTCATCATGGTCAGAAAGAGAAGAACTGAATTACCTAGTGGGGGTGAAAGCTCCGATGCCCAACGTCCTGCTGAAAGGAGTGCACCACCTCAACAACAGGCCCCTGCCTCAGGAGGGACTGGACCTCAAGGAGGTAGAGGCTGGGGGGGTACCCAAGGAGGACGGGGTGGTTATGGTGGGGGCCGTGGCCGTGGAATGCCTCAACAGCAATATGGTGCCCCTCCTGAATATCAAGGTAGGGGAAGAGGAGGGCCTTCTCAGCAAGGAGGTCGTGGAGGATATGGCGGTGGCCGAGGTGGTGGTGGTATGGGCAGTGGCCGAGGCGTAGGTCCTTCATATGGTGGCCCATCTAGGCCACCGGCACCCGAGCTGCACCAAGCAACCTCAGTTCAGTCATATCAAACTGGGGTGAGTTCTCAGCCTGCATCATCTGAGGCCAGTTCTTCCCTCCCCCCAGAACCCATTGATTTGGAACCATCAATGGGGCAGATGGTGATTCATTCTGAAGCTACTCCTGCTCCTCCTCCCTCAAGTAAATCATCAATGAGGTTTCCCCTTCGACCTGGAAAGGGCAGCTATGGCACTAAATGTGTTGTCAAAGCTAATCATTTCTTTGCTGAACTGCCAAACAAAGATCTGCATCAATATGATGTTACAATTACTCCTGAAGTGACATCGAGAGGGGTGAACCGTGCTGTTATGGAGCAGTTGGTAAGGCTGTACCGGGAAACTCACTTGGGTAAGAGGCTTCCTGCTTATGATGGACGCAAGAGCCTCTATACTGCTGGTCCACTTCCTTTTATGTCAAAGGAGTTTAGAATCACTCTTGCGGACGATGACGAAGGAGCAGGAGGCCAGAGGAGGGACAGAGAATTCAAGGTTGTGATAAAATTGGCTGCAAGAGCAGACCTTCATCATTTAGGACTCTTTTTGCAGGGAAGACAAACTGATGCTCCTCAAGAGGCTTTGCAGGTCCTTGACATTGTTCTGCGTGAACTCCCTACTACAAGGTATTGTCCCGTAGGGAGATCATTTTACTCACCTGACCTTGGCAGAAGGCAGCCTTTAGGTGAGGGTCTGGAAAGCTGGCGTGGTTTCTATCAAAGTATTAGACCCACTCAGATGGGACTGTCACTGAATATTGATATGTCCTCCACTGCATTTATTGAGCCACTGCCGGTAATTGATTTTGTAACTCAACTGCTCAATAGAGATGTATCTGCCCGGCCACTGTCTGATGCTGACCGTGTGAAGATTAAGAAAGCTCTCCGAGGTATTAAAGTTGAAGTAACACATCGTGGAAACATGAGAAGAAAATATCGAATATCTGGTCTCACTTCACAGGCAACCAGAGAATTGACATTCCCTGTTGATGAAAGAGGAACTATGAAATCCGTTGTGGAGTACTTCTATGAAACCTATGGGTTTGTAATTCAACATACCCAGTGGCCTTGTCTGCAAGTTGGCAATACACAGAGACCAAACTACTTGCCAATGGAGGTTTGCAAGATAGTGGAAGGTCAAAGGTACTCAAAGAGGTTGAATGAACGACAGATCACTGCTCTGCTGAAAGTCACATGTCAGCGTCCTGTTGAGAGGGAGCGTGACATAATGCAGACAGTACACCACAATGCCTACCATGAAGATCCTTACGCCAAAGAATTTGGAATCAGAATTAGTGAGAAGCTTGCTCAAGTTGAAGCCCGCATCCTTCCTGCACCATGGCTCAAATATCATGACACAGGAAGAGAAAAAGATTGTCTTCCTCAAGTTGGGCAATGGAACATGATGAACAAGAAAATGGTGAATGGGGGAACAGTTAACCACTGGTTCTGCATAAACTTTTCAAGGACTGTTCAAGATAGTGTTGCCCGTAGCTTTTGCTATGAACTTGCCCAGATGTGTTATATATCTGGCATGGCATTTAATCCAGAGCCAGTTGTCCCTCCAGTCAGTGCTCGCCCTGATCAAGTAGAAAAGATGTTAAAAACTAGGTATCATGATGCCAAAAACAAACTACAGGGAAGGGATCTCGATCTGCTCATTGTAATTTTGCCTGATAACAATGGATCACTTTATGGTGATCTCAAACGAATTTGTGAGACGGATCTTGGTCTTGTCTCACAATGCTGTTTAACTAAGCATGTCTATAAAATGAGCAAGCAGTACCTTGCAAATGTTGCTTTGAAAATTAATGTCAAGGTTGGTGGGAGAAACACTGTGCTGGTGGATGCACTGTCACGACGCATTCCCTTAGTCAGTGATAGACCAACAATTATATTTGGAGCTGATGTGACTCATCCCCATCCTGGGGAGGACTCAAGTCCCTCAATTGCAGCTGTGGTGGCATCTCAAGATTATCCTGAAATCACCAAGTATGCTGGTTTAGTTTGTGCCCAAGCCCATAGACAGGAACTCATCCAAGATCTTTTCAAGCAATGGCAAGATCCAGTCAGAGGAACTGTGACTGGCGGAATGATCAAAGAACTTCTTATATCTTTTAGGAGGGCGACTGGACAAAAGCCCCAACGCATCATATTTTACAGGGATGGTGTGAGTGAGGGACAGTTTTATCAAGTTCTATTGTTCGAGCTAGATGCTATTCGAAAGGCATGTGCCTCCCTCGAGCCCAACTATCAACCTCCTGTGACTTTTGTTGTGGTTCAAAAGCGTCATCACACAAGGCTCTTTGCCAGCAACCATCATGACAGGGGTTCTGTTGATAGAAGTGGCAACATATTGCCTGGTACGGTTGTAGACTCTAAAATCTGTCATCCAACCGAGTTTGATTTTTATCTTTGCAGCCATGCTGGAATACAGGGTACAAGCCGTCCAGCTCACTACCATGTTCTGTGGGATGAAAACAATTTTACTGCTGATGCTTTGCAAACACTTACCAACAATCTTTGCTACACATATGCAAGATGCACAAGATCTGTTTCAATTGTGCCCCCTGCATATTATGCCCATTTGGCTGCATTTCGAGCAAGGTTTTACATGGAGCCAGAGACTTCCGATAGTGGGTCTATGACAAGTGGTGCTGTTGCGGGCCGTGGAATGGGGGGTAGCGGTGGCGGCGGTGGCCCTGTGGGGCGTAGCACCCGACCTCCTGGAGCTAATGCTGCTGTGAGACCATTACCTGCCCTCAAGGAGAATGTCAAGAGGGTAATGTTTTACTGTTAAAATGACCACAACCAGCTCTAAAGGAGAACTCTAGGAGGGTTATGTTTTATTATTAAACCTTGTTTTGTGGAGTGCTTATTTTTTCTTTCAAAGTTTGATGTGTTGAATAATCAAGTGTGTTGCCATCTTGTTTCTCGTTTTTGTCAAAAACCTTTGTCATTATGAAATTTGATGCAAACTATGTTACTTTCTTTGTTGTTGCCGTTGAGAAGTGGAATCTTTTGAATGGATGATGGAGAAATTGAATGGATTTGATAGTGTTTTATTATTATCGAAATATTGGTGTTTCC 3577 0.4579 MVRKRRTELPSGGESSDAQRPAERSAPPQQQAPASGGTGPQGGRGWGGTQGGRGGYGGGRGRGMPQQQYGAPPEYQGRGRGGPSQQGGRGGYGGGRGGGGMGSGRGVGPSYGGPSRPPAPELHQATSVQSYQTGVSSQPASSEASSSLPPEPIDLEPSMGQMVIHSEATPAPPPSSKSSMRFPLRPGKGSYGTKCVVKANHFFAELPNKDLHQYDVTITPEVTSRGVNRAVMEQLVRLYRETHLGKRLPAYDGRKSLYTAGPLPFMSKEFRITLADDDEGAGGQRRDREFKVVIKLAARADLHHLGLFLQGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSARPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETYGFVIQHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVERERDIMQTVHHNAYHEDPYAKEFGIRISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNHWFCINFSRTVQDSVARSFCYELAQMCYISGMAFNPEPVVPPVSARPDQVEKMLKTRYHDAKNKLQGRDLDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVYKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDYPEITKYAGLVCAQAHRQELIQDLFKQWQDPVRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDRGSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAVAGRGMGGSGGGGGPVGRSTRPPGANAAVRPLPALKENVKRVMFYC 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01370 1058 SMART PAZ_2_a_3 394 526 IPR003100 GO:0005515
Pste9g01370 1058 MobiDBLite consensus disorder prediction 1007 1041 - -
Pste9g01370 1058 SUPERFAMILY PAZ domain 196 541 IPR036085 GO:0005515
Pste9g01370 1058 MobiDBLite consensus disorder prediction 122 148 - -
Pste9g01370 1058 Pfam N-terminal domain of argonaute 193 328 IPR032474 -
Pste9g01370 1058 Gene3D - 747 1058 IPR036397 GO:0003676
Pste9g01370 1058 MobiDBLite consensus disorder prediction 1 157 - -
Pste9g01370 1058 Pfam Argonaute linker 1 domain 338 388 IPR014811 -
Pste9g01370 1058 SMART DUF1785_2 337 389 IPR014811 -
Pste9g01370 1058 Gene3D - 568 741 - -
Pste9g01370 1058 FunFam Argonaute 10 568 741 - -
Pste9g01370 1058 FunFam Protein argonaute-2 383 509 - -
Pste9g01370 1058 SUPERFAMILY Ribonuclease H-like 664 999 IPR012337 -
Pste9g01370 1058 CDD Piwi_ago-like 548 998 IPR045246 -
Pste9g01370 1058 FunFam protein argonaute 10-like 747 1058 - -
Pste9g01370 1058 ProSiteProfiles Piwi domain profile. 678 999 IPR003165 GO:0003676
Pste9g01370 1058 Gene3D paz domain 383 508 - -
Pste9g01370 1058 Pfam Glycine-rich region of argonaut 70 169 IPR024357 -
Pste9g01370 1058 Pfam Piwi domain 679 998 IPR003165 GO:0003676
Pste9g01370 1058 Pfam PAZ domain 394 519 IPR003100 GO:0005515
Pste9g01370 1058 Pfam Argonaute linker 2 domain 530 576 IPR032472 -
Pste9g01370 1058 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 172 999 - -
Pste9g01370 1058 MobiDBLite consensus disorder prediction 22 37 - -
Pste9g01370 1058 CDD PAZ_argonaute_like 389 503 - -
Pste9g01370 1058 ProSiteProfiles PAZ domain profile. 390 504 IPR003100 GO:0005515
Pste9g01370 1058 SMART Piwi_a_2 678 999 IPR003165 GO:0003676
Pste9g01370 1058 Pfam Mid domain of argonaute 587 662 IPR032473 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01370 Pste-Chr9 12505963 12513033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01370 74 1058 Eukaryotic Initiation Factors Gene Family AT1G48410 81.130 0.0 1625