Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01362 ATGCTTTCTTCATTAGAGTACTGTGCTTGTTTTCCTGCGTTTTTGGAGGGATGTAGGTTATTGGCCTATTATTGTTTGAAGATGGCTGATGGTCATGAGACTGATAAGAACATTGAGGTGTGGAAAATCAAGAAATTGATCAAAGCTCTTGAGGCGGCTAGAGGAAATGGGACAAGTATGATTTCCCTTATTATGCCCCCGCGTGATCAGATAGCTCGTGTCACCAAGATGCTTGGTGATGAGTTTGGAACTGCGTCAAACATCAAAAGCAGGGTGAATCGACAGTCGGTGCTGGGTGCAATCACTTCTGCTCAGCAGAGGCTAAAGCTCTACAACAAGGTTCCTCCAAATGGGCTTGTTCTGTATACTGGCACAATTGTGACTGAAGATGGGAAGGAAAAGAAAGTAACTATTGATTTTGAGCCTTTTAGACCAATTAATGCATCTCTTTATCTTTGTGACAATAAGTTTCACACTGAAGCTTTGAATGAGCTCTTGGAATCTGATGACAAGTTTGGATTTATTGTTATGGATGGCAATGGTACCTTGTTTGGAACCTTGAGTGGTAACACAAGAGAGGTGCTTCATAAATTCAGTGTGGATCTTCCAAAGAAACATGGAAGAGGAGGACAATCTGCACTACGTTTTGCCCGTCTTCGTATGGAGAAGCGTCATAACTATGTTAGGAAGACGGCAGAGCTTGCTACACAGTTCTACATCAATCCTGCTACCAGCCAACCTAATGTTTCTGGATTAATACTAGCTGGTTCAGCGGATTTTAAAACTGAGCTTAGTCAGTCAGATATGTTTGATCCTCGACTTCAGGCAAAAATACTCAATGTTGTTGATGTCTCCTATGGAGGTGAGAATGGGTTTAATCAGGCTATTGAACTATCTGCTGAAATTCTGTCCAATGTGAAGTTTATCCAGGAGAAGCGATTGATTGGAAAATACTTTGAGGAAATCAGTCAGGATACTGGAAAGTATGTTTTTGGGGTTGATGATACTCTAAAGGCTTTGGAAATGGGAGCTGTCGAGACGCTAATTGTTTGGGAAAATCTGGATATGAATCGGTATGTCTTGAAAAATAGTGGTTCAGGCGAGATTGTCATTAAGCACTATAACAAGGAACAGGAGGCCAACCAAAGCAATTTTCGGGATCCTGATACATCTGCTGATTTTGAGGTTCAGGAGAAGGTGTCTCTGCTCGAGTGGTTTGCAAATGAATACAAACGATTTGGTTGTACTCTTGAGTTTGTCACCAATAAATCACAAGAAGGTTCACAGTTTTGCAGAGGTTTCGGTGGGATAGGTGGGATCTTGCGATACCAGCTTGATATGCGATCATTTGATGATTTCTCTGATGATGGAGAATGGGAGGTGGTTGCACTTGCTGCTGCTGGTGCTGCTGCTGGTCCTCCTCCTCTTCGTCCTCCATGTCTGTCTGTGGTGTTGCATGGAATGTTTGATTGTGAATCAAGATGCTTTGCTCCTGAAGTTCTTCTTTCTAATATGAGTTGCTTGCTCACTTGTTCTCCTATCCTGCATGCTCTGGTTCCACAAGTTCCTGCAAAGCTTTTTGCAACACATGCTCCCCTGCTCTTTAATACTTACACCCAAAAAAGCAAGAAGAAAAACATGTTCCTCAGAGAAGCCCCATCTAGAATCAATGAAGCTTGGTTGATATCTTTTGATTATTTTCTACCAAGCTTGGCTAATATCCTTCTCATCTATGCTTCATCTCTATATCACACAAAGGTGATTCCAGATGCTTCGTGTGATGCAGTGTTTTCAATGATGCTCCATCAGATACCTGGCACTTGAGTCTATGACTAAATCTCTAGTGTTCTATATTTCAAAACTTTGTTGTGTTGAACTAATGTTCGATTTTATTTTTTCTTGGTACTTCACACATGTTGTGCTTATATATGACTTGTATTGACATTGCTTAATGGTATGTGACGTGTTCTTATGAAAATTTCAGTTTGCTAATAATATACGATTATATCAACACCCATGTCAATGGGCTGGATTTTGGGTTGTGGTTTGGAATCTTCCATGATGGGATTGTTTGGCTGTGCTTCATAAAGCAATA 2095 0.4091 MLSSLEYCACFPAFLEGCRLLAYYCLKMADGHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNSGSGEIVIKHYNKEQEANQSNFRDPDTSADFEVQEKVSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDDFSDDGEWEVVALAAAGAAAGPPPLRPPCLSVVLHGMFDCESRCFAPEVLLSNMSCLLTCSPILHALVPQVPAKLFATHAPLLFNTYTQKSKKKNMFLREAPSRINEAWLISFDYFLPSLANILLIYASSLYHTKVIPDASCDAVFSMMLHQIPGT 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01362 607 FunFam Eukaryotic peptide chain release factor subunit 1 163 304 - -
Pste9g01362 607 FunFam Eukaryotic peptide chain release factor subunit 1 29 162 - -
Pste9g01362 607 FunFam Peptide chain release factor subunit 1 306 462 - -
Pste9g01362 607 NCBIfam peptide chain release factor aRF-1 40 444 IPR004403 GO:0003747|GO:0006415
Pste9g01362 607 SMART eRF1_1_2 31 167 IPR005140 -
Pste9g01362 607 Gene3D - 306 460 IPR029064 -
Pste9g01362 607 Pfam eRF1 domain 3 308 445 IPR005142 -
Pste9g01362 607 Pfam eRF1 domain 1 45 165 IPR005140 -
Pste9g01362 607 Gene3D eRF1 domain 1 24 162 IPR024049 -
Pste9g01362 607 SUPERFAMILY Translational machinery components 169 303 - -
Pste9g01362 607 SUPERFAMILY L30e-like 305 447 IPR029064 -
Pste9g01362 607 Gene3D eRF1 domain 2 163 304 IPR042226 -
Pste9g01362 607 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 33 167 IPR024049 -
Pste9g01362 607 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 32 456 IPR004403 GO:0003747|GO:0006415
Pste9g01362 607 Pfam eRF1 domain 2 171 304 IPR005141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01362 Pste-Chr9 12374571 12378263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01362 28 460 Eukaryotic Initiation Factors Gene Family AT3G26618 90.069 0.0 811