Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01360 GCGGAATTGGCGTGTTTTGCTCGTACGAGTCTCCCTCTGAACTTGCGGAGCCACAAACCCGTCCTTAACAAAGGAACGAGTTGAAACTTGAAAGCTTAAGTTCCTCTTTTCAACCGTATTCTCTTCCCTTCCTTTCGGAGTTTGCTCTTCCTTCGCTGTCACGGTGAAGGTTTTGCAAACATGACCGGAAAAGCCTCCGTCTCCAAGGAGCTCCACGCCAAGCATACCAAGATATTAGAGGGACTTGTTAAGCTACCTGACAACAGGGAATGTGCAGACTGCAAGGCCAAGGCACCACGATGGGCAAGTGTAAACTTAGGGATATTCATTTGTATGCAATGTTCAGGAATTCATCGGAGTCTTGGAGTGCATATATCAAAGGTGCGGTCCACAACTTTGGATACATGGTTGCCAGATCAAGTTTCTTTTATGCAAATAATGGGTAATGCAAGGTCAAATATGCACTGGGAGGCAGAGTTACCACCAAATTTTGACAGACAAGGATGTGGAATCGAGAAATTTATACGTTCCAAGTATGTGGAGAAAAGATGGGCTTCAAAAGGGGGATTACAACCAGCTTCAAAATCAGTTGAAATAATCTGTAACTCAAATGGGTCACCGACTGCTGGGCCTGAGCCCAAGAGTGCTATTCAAAAGAATAGGAGATTGTCTCTTGAGGAAAGCATTCTGGTGAAACATATGACACAAATTCGGCCTCCAATAACGAGATCTCATGAGGGCTCCTTAGATTTGCAAGGGAAGAGTCCACCACCATTAAGGAGGCCATCTGCGTCATTTGATTTTGACAACTCTAAGGGAAAAACCAATGGTACTGTTGATCATTTTGGCTTGCATTCCATCCATGATGATAAACAGAATTTCTCAACTACACCTTCTAGCTGGACAACATTTGATTGAGAAGGCTTTTGAGGTGGTGTATGTTTGTAGATTGTTGAGCTAGCTCTTCACGTAGATGTCACATTATTGTTGCAGACGATCAAGCAATGTTGCTTTGCTTGAACTTTGAACTGCAGTGATATGGTTTAGGGACAAAGTTTAAATAAACAGAGTGCTGCAGGACACAAATTTGGTGCACATCTGCAGCACCTTGCCATTGATTGATCACACAGCTTGAGGCCGTTCATAAAGTGGTTTGATTTATACGATTACAGCCATTGATTTATGCAAGAGTCTGTGTGACTGAAGATGTTGTCATATGCCCCAAAGTTTGTTCTTTTTCTAGTGTACCCATTTCTTTGAAATGACACATTACTACTCATATTTTTTACTAGAGACAATGTCCAGCTCAACCTCAAGAGTTCAAGTATATAGCTTTTGAACGTCT 1345 0.4238 MTGKASVSKELHAKHTKILEGLVKLPDNRECADCKAKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSFMQIMGNARSNMHWEAELPPNFDRQGCGIEKFIRSKYVEKRWASKGGLQPASKSVEIICNSNGSPTAGPEPKSAIQKNRRLSLEESILVKHMTQIRPPITRSHEGSLDLQGKSPPPLRRPSASFDFDNSKGKTNGTVDHFGLHSIHDDKQNFSTTPSSWTTFD 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01360 245 Pfam Putative GTPase activating protein for Arf 17 127 IPR001164 GO:0005096
Pste9g01360 245 SUPERFAMILY ArfGap/RecO-like zinc finger 15 126 IPR037278 -
Pste9g01360 245 Gene3D Arf GTPase activating protein 2 129 IPR038508 -
Pste9g01360 245 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Pste9g01360 245 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Pste9g01360 245 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Pste9g01360 245 CDD ArfGap 19 119 - -
Pste9g01360 245 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 132 IPR001164 GO:0005096
Pste9g01360 245 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 227 IPR044520 GO:0005096
Pste9g01360 245 SMART arf_gap_3 5 132 IPR001164 GO:0005096
Pste9g01360 245 MobiDBLite consensus disorder prediction 178 212 - -
Pste9g01360 245 FunFam stromal membrane-associated protein 1 isoform X1 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01360 Pste-Chr9 12342423 12346384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01360 19 119 C2H2 Transcription Factor Family AT4G05330 49.533 2.48e-29 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01360 9 12342423 12346384 Pste9g01360 9 12342423 12346384 ECH