Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01336 GTGATAGCAAAAGATACACACACGAAATACGATTTGATTTGAATACACATTCATTTCCCTCGCAGTGAGAGTAGGGTTTGGTTTTTATCAGTTTTTCTCCACACAGGATAATGGAACAAAAAGCCAGTCAGGAATCGTCTAAATTCGCTTTCGATTTGAAGTGTGAGAAGGTTCTTGAAACAGTTGATCAATCAATCACATGCCCCACTCCACAAAAGAATGCGGAATCCCTAACCCTCCAATCCAGGGAGGAGCACCCCCACATTCCGGAGAAATATTATGTACTTGTGGATTTCTTTGGTGCAATGTGTTGTTCACTAAGGTTGCTGCATCTGCGCAAAAGGGCTCCAACTTTTTTAAATATTTGCAGCAAGGTTGAAGTGATTTCCAAGAGGAAGTTTTCCCATGCCCATCTTGCACAGATAAAGTATGTACTCCCTGAAATTGTATGTATAGATAAGGTGCTTGTTCATGATAAGAAAAGCTTGTGTATGGTGCCAGATATGAATATTACCTTAAAATTTGAAGTGCTAAAAGATAGATGTGATAAATCTGCCAATCTAGCTGTTCTTCGACACTTTAAATCCATGCTGATTGATTTTCTTGATAAACATCCTGAGGTTGTTGATATTCCAGAGGCTCTACTTCCAGAACCCTTTGGCAAAAAAACCTGTAGTTTGAAATGTGAAGTTTCTCACGTTGAAAAATTTATCGGTCAATCTCTGGATGTAAATTCTTCAATGGAACTTTCTTCAATTTCCAGTCAAACTAAAGTGTTGCCCGAGAAATTCCAATTGTATCAAACTCTTAGCGGACATTCTTCTCAGAAGAACCTTGACCAGGGAGAGAAGACTGAAAAGACTGACTGCTTTCCACTCACAAAAACTTCTCCATCATTTCGTTCATCTGATAGTCTGGATAATGGAGGAAGTGAAAAGGCACAGCAGAAAGAATTTTCACCAATATCTGATCACATGGCTAATCTGAACACAGAAAGAGGGGACCAGACAGAGGAACTGTTTTCTATGTCTTTTCAACCTGGTGTGACTAATACACCAGTACATACGATTCGTCCTCAACACTCAGTTACTTGCACTAAGTCTGAAAGTCCAGATATGAAAAATATATGCTGTGTTGCTGATAGTTTTATGACAGAGACACCTGCTCAGTCAGCACCTTTGAGATTATTGCCCATGTCTGATGTTAAGTGTCATGATGTGCCTACTCAAAAGTCAGCATCCTCTCATAAGCCAGCAAAAAGAGTGCTTGACTTTTCACTCATGGGGGACAATGATGAGGATTGCAATTCTTCTGGGTCTGTTTCTGTACCTCAGGAGGCAGAAGAGAGCCTTGGTTATTCTTTTAAGAAAACCAGCCAAAAGCAAGCTGGTTTAGATACAAGGCATAATAATAAATCTTCACCATTGCTGGACCTGGTTAATGTGATTCAATCTATCTTTCAATCTGTCCAAAGAATGCCAATCACCAAAGAGGAGCTGTTGCATAAGATACTTATGAATAGTTTGGATTTTGTTGAGATTAGAGAAGTTGAAGAACAGGTTGAGTCTTTGGAAAGGTTGGTGCCCGACTGGATCTGCAAGAAATTGCTTCCTGCTGGAGATACTATGTACTGCATCAATAAAGTGTCTGATGTAGAGTATATACGAACAAGGCTTTCTAACAACGAGATAGTTTGAGAGAAGGGGCTTTTAGCGACTGATAATGACAACAAATGGTTTTCCAGCAAGAATATTGTTTAAGACGAGGGGCTTTTACGGACCGATAATCACAACAAATGATTTATAATTTTTTGTTAATTTTTATTACGGTCTTTAATACGTAATTAGAGGTTGTATGTTTTCTTCATCTTCATGCATTTGTTTAATATAATGAAAA 1896 0.3861 MEQKASQESSKFAFDLKCEKVLETVDQSITCPTPQKNAESLTLQSREEHPHIPEKYYVLVDFFGAMCCSLRLLHLRKRAPTFLNICSKVEVISKRKFSHAHLAQIKYVLPEIVCIDKVLVHDKKSLCMVPDMNITLKFEVLKDRCDKSANLAVLRHFKSMLIDFLDKHPEVVDIPEALLPEPFGKKTCSLKCEVSHVEKFIGQSLDVNSSMELSSISSQTKVLPEKFQLYQTLSGHSSQKNLDQGEKTEKTDCFPLTKTSPSFRSSDSLDNGGSEKAQQKEFSPISDHMANLNTERGDQTEELFSMSFQPGVTNTPVHTIRPQHSVTCTKSESPDMKNICCVADSFMTETPAQSAPLRLLPMSDVKCHDVPTQKSASSHKPAKRVLDFSLMGDNDEDCNSSGSVSVPQEAEESLGYSFKKTSQKQAGLDTRHNNKSSPLLDLVNVIQSIFQSVQRMPITKEELLHKILMNSLDFVEIREVEEQVESLERLVPDWICKKLLPAGDTMYCINKVSDVEYIRTRLSNNEIV 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01336 528 Pfam DNA replication factor CDT1 like 53 115 IPR014939 -
Pste9g01336 528 PANTHER DNA REPLICATION FACTOR CDT1 21 523 IPR045173 GO:0003677|GO:0030174|GO:0071163
Pste9g01336 528 Gene3D - 429 526 IPR038090 -
Pste9g01336 528 SUPERFAMILY "Winged helix" DNA-binding domain 42 183 IPR036390 -
Pste9g01336 528 MobiDBLite consensus disorder prediction 254 283 - -
Pste9g01336 528 CDD Cdt1_m 34 185 IPR014939 -
Pste9g01336 528 SMART CDT1_2 52 181 IPR014939 -
Pste9g01336 528 Pfam DNA replication factor Cdt1 C-terminal domain 432 495 IPR032054 -
Pste9g01336 528 MobiDBLite consensus disorder prediction 234 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01336 Pste-Chr9 12049291 12053659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01336 439 522 Core DNA Replication Machinery Family AT2G31270 45.238 5.94e-16 79.0