Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01331 GCAATTCCAGACCAACTAACCCTGTCTTGAAAGACTCTACCTACCTACCACCTACTATTTCAAGTTCTCTTCCACTTTCTCATTCTTCTTCACTCACCAACTTGTCATCTTCATGTCAACCGCTCAAATCATCACCTGCAGAGCTGCAGTGGCATGGGGAGCTGGGGAACCATTGCTGATGGAGGAAGTGGAAGTCAGTCCTCCCCAACCAATGGAGATTAGGATTAAGGTTGTCTCCACTTCTCTCTGTCGCAGTGATCTCTCCGCTTGGGAATCTCATGCCATATTTCCTCGCATATTTGGCCACGAAGCATCAGGGATTGTTGAGAGTGTGGGACTGGAAGTGACTGAATTCAAAGAGGGAGATCATGTGCTAACAGTATTCATTGGAGAATGCATGGCATGCGGGCATTGCAAATCTGGAAAAACCAATACTTGTCAAGTTTTGGGATTGGAAAGGAGGGGTTTAATGCATAGCGATCAGAAGACACGATTCTCAATAAAAGGGAAGCCTGTTTACCATTATTGTGCAGTTTCAAGTTTCAGTGAATATACAGTAGTCCATTCAGGATGTGCAGTGAAAGTCAGCCCCTTTGCACCTCTTGAGAAAATATGCCTTCTGAGCTGTGGAGTTGCTGCAGGTCTGGGAGCAGTATGGAATGTTGCTGATGTGTCAAAAGGATCAACTGTGGTGATTTTTGGTCTTGGAACTGTTGGCCTGTCTGTTGCTCAAGCTGCCAAACTAAGAGGTGCATCACGAATAATTGGTGTGGACAACAATCCACAGAAGAGTGAATACGCTAAAGCTTTTGGGGTTACTGAAGTTGTTGATCCAAATTCCTATAAAGAACCTATTGCTCAGGTTATTAAGCGAATTACCGATGGTGGGGCAGATTTCTCATTCGAATGTGTAGGAGACACCGATATGATAACCACTGCATTGCAGTCATGCTGTGATGGATGGGGTTTGACTGTCACACTTGGTGTGCCAAAGGTGAAGCCTGAGATGTCAGCTCATTATGGACTATTCCTATCAGGAAGAACATTGAAAGGATCTCTATTTGGAGGATGGAAACCAAAATCTGATCTGCCTTCATTGGTAGAGAAGTATGTCAAGAAGGAAATCCAGATTGATGACTACATCACACACAATTTGCCATTTGACGACATTAACAAAGCTTTCAATCTCATGAAGGAAGGAAAGTGTCTGCGTTGTGTTATCCACATGCCAAGATAATACTTTTGTGGCGCTTTTCTTTTTTTTTTTCTTTCCCTAAAAAATTAAGAGTTATTGAAGAAATTAATGCTCCGGCGAGTGTAGAAATTACTCTGCGTAATTATCATTTGAACATTGGAGAGGGTTGTATCTTGTAAAGGACAAAATCCATTATGCTAATATGCTATTTTATGTTTTTTTTTTCTTTGCTCACCTAGATTTACAAGCTAAACAGGTTAGTGCCTATGGCCTAACACTATTAATGATTGAGACAAGTTCTCGCAACATTTGTGGTTTAC 1515 0.4191 MSTAQIITCRAAVAWGAGEPLLMEEVEVSPPQPMEIRIKVVSTSLCRSDLSAWESHAIFPRIFGHEASGIVESVGLEVTEFKEGDHVLTVFIGECMACGHCKSGKTNTCQVLGLERRGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSPFAPLEKICLLSCGVAAGLGAVWNVADVSKGSTVVIFGLGTVGLSVAQAAKLRGASRIIGVDNNPQKSEYAKAFGVTEVVDPNSYKEPIAQVIKRITDGGADFSFECVGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVEKYVKKEIQIDDYITHNLPFDDINKAFNLMKEGKCLRCVIHMPR 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01331 374 FunFam S-(hydroxymethyl)glutathione dehydrogenase 177 315 - -
Pste9g01331 374 Pfam Alcohol dehydrogenase GroES-like domain 34 157 IPR013154 -
Pste9g01331 374 SUPERFAMILY GroES-like 3 182 IPR011032 -
Pste9g01331 374 SUPERFAMILY GroES-like 323 371 IPR011032 -
Pste9g01331 374 Pfam Zinc-binding dehydrogenase 201 325 IPR013149 -
Pste9g01331 374 CDD alcohol_DH_plants 7 371 - -
Pste9g01331 374 Gene3D - 177 315 - -
Pste9g01331 374 FunFam Alcohol dehydrogenase 6 12 193 - -
Pste9g01331 374 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Pste9g01331 374 Gene3D - 12 367 - -
Pste9g01331 374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 163 335 IPR036291 -
Pste9g01331 374 PANTHER ALCOHOL DEHYDROGENASE 5 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01331 Pste-Chr9 12001702 12006576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01331 35 109 Monolignol Biosynthesis Gene Families AT2G21730 39.241 1.08e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01331 9 12001702 12006576 Pste9g01331 9 12001702 12006576 ECH