Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01317 GTAGTATGATATGTTGTTGTGGTCATCCCTTACATCAGTTTATCAGAATATATAACACCCTTTGCTCCAATCACTTCCTATTGTTCATTCCACAAACTATACAGTTTCAAATCTATGCAACAAGGCTCTTTCTGCATGAGACATCATCTCTCTTAAACCCCCTCTTCAGTCAAAACTCCCAATCATACTATTCCCATTTCACCACTCACACTTTTCTCTCCCTCTTATTCTTCCTTTTCAATATAACTTCCTCATATACACACATACCCTCCCTCAATAGATTCACTTTTGAATTTGCTTGCTACCTGCTACCCTTTTTTCTCTTTTGCTAGATCAGATTATCAGTGCCAAAAAGGTCCTTTGGAGTTTGGACCATATTGTCTTGAAGCCTAAAAGGTTTGGAAAAAAGTACTGATGAGAAACTCTGAAGCAACAACACATGTGGGGATGGAGATAGAAGCAACTAGGCCTTCAGGAATTGGTTCAACCCTACCAGGGTTGAGTCCTTTGAGTGAGACCCTTTGGAGGGAAAAGGCCAACACAGAGATCATTGGAGATGTCTCAGCAAGACTCACATGGAAGGATCTCACTGTGATGGTAACCCTTAGCAACGGTGAAACACAAAATGTTTTGGAAGGTTTAACTGGTTATGCTGAACCAGGAACCTTCACTGCTCTCATGGGGCCCTCAGGTTCAGGAAAATCTACTCTACTTGATGCACTTTCTAGTCGTCTAGCTGCAAATGCCTTCCTCTCAGGCACCATCCTCCTTAATGGACGCAAGGCCAAACTCTCTTTTGGCACTGCTGCTTATGTGACACAAGATGACAACTTGATTGGTACCCTAACAGTGAGAGAAACAATTTCATATTCAGCACGTTTGCGTTTGCCGGATAACATGCCATGGGCAGATAAGAGGGCATTGGTTGAGAGCACCATAGTGGCAATGGGACTTCAAGATTGTGCTGACACAGTTATTGGAAATTGGCATTTACGAGGGATCAGTGGTGGGGAGAAAAGAAGGGTTAGCATTGCATTGGAAATCTTGATGAGGCCAAGGTTACTTTTCCTTGATGAGCCAACTAGTGGACTTGACAGTGCTTCAGCATTCTTTGTGACCCAGACACTACGTGCCTTGGCAAGGGATGGCAGAACCGTGATAGCCTCTATTCATCAGCCTAGCAGTGAAGTGTTTGAACTATTTGACCAATTGTACTTGCTTTCTAGTGGCAAAACTGTTTATTTTGGTCAAGCTTCTGAGGCATATGAGTTTTTTGCACAAGCTGGCTTTCCATGTCCTGCTTTGAGGAACCCTTCTGATCATTTCCTCAGGTGCATCAATTCTGACTTTGACAAAGTCAAGGCTACCCTTAAAGGATCCATGAAACTCAGGTTTGAGGGAAGTGATGATCCTTTGGGCAGGATCTCTACTGCTGAAGCTATCAGAACTCTTATAGACTACTACCGTACTTCTCAGCACTCTTACGCAGCAAGACAAAAAAAGGGAACAGTGCTTGAAGCTGGAGGAAGTGAGGCCAGTTTCTTGATGCAGTCATACACGTTAACCAAGCGTTCCTTCATCAACATGTCAAGGGACTTTGGCTACTACTGGCTTAGGCTTGTTATCTACATTGTGGTCACTATCTGTATTGGAAGCATTTATTTGAATGTTGGGACAGGCTACAACTCTATTCTGGCTAGGGGTTCTTGCGCATCTTTCGTCTTTGGTTTTGTTACTTTCATGTCAATTGGTGGATTCCCTTCATTTGTTGAAGACATGAAGGTTTTCCAAAGGGAGAGGCTAAATGGTCACTATGGTGTCACTGCATTTGTCATCAGCAATACATTATCTGCAATGCCCTTTCTGATTTTGATCACCTTTCTCTCTGGAACCATTTGTTACTTCATGGTTCGGCTACACCCTGGCTTTTGGCACTACCTCTTCTTTGTGTTGTGCCTTTATGCCAGTGTCACAGTGGTTGAAAGCTTAATGATGGCAATTGCTAGCATTGTACCCAACTTCCTCATGGGCATTATTATTGGAGCTGGCATTCAGGGCATATTCATGTTGGTGTCAGGATACTTTAGGCTCCCACATGATATCCCAAAGCCAGTATGGCGCTACCCAATGTCATACATCAGTTTCCACTTCTGGGCACTACAGGGCCAGTACCAAAATGATTTGAGGGGCTTGCTTTTTGACAACCAGACACCAGATCTACCAAAAATACCTGGTGAATATATTTTAGAAAAAGTGTTCCAAATTGATGTCAACAGATCAAAGTGGATAAACTTGAGTGTGATCTTCAGCATGATTGTGATCTACCGTATCATTTTCTTCATCATGATCAAAATCAATGAGGATGTGACACCATGGGTCAGAGGGTACATGGCTAGGAGAAGAATGCAGCAGAAGAGTGGAACCCAGAACACAACTATTGCACCTGATGTTCTCACTCAGTCACCATCTCTTAGAACCTATGTTTCTCCTCAATCAAAATGAAGTCATCAAAGTTTGACTAAGTAGTAACGGAGCTTTCATTGTCAAATAGGATAGATATATATATAACTTAAAAAAATTCTTATTATTTTTATACATTATTGGTCTTATAACAGTGTTGTTGTTGACAGTACTCTGAGATTCCCTAAGAATGGGACGAGTAATATGAAATTCTGGAATGCTTTATTATGAAGTCTTCAATGTCTTTGTTTATAATTTTTATTACAAAATCCACGTTATGTATTATTAGAAAATGTTATGC 2761 0.4147 MRNSEATTHVGMEIEATRPSGIGSTLPGLSPLSETLWREKANTEIIGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDNMPWADKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSSGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLGRISTAEAIRTLIDYYRTSQHSYAARQKKGTVLEAGGSEASFLMQSYTLTKRSFINMSRDFGYYWLRLVIYIVVTICIGSIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLRGLLFDNQTPDLPKIPGEYILEKVFQIDVNRSKWINLSVIFSMIVIYRIIFFIMIKINEDVTPWVRGYMARRRMQQKSGTQNTTIAPDVLTQSPSLRTYVSPQSK 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01317 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 290 IPR027417 -
Pste9g01317 695 SMART AAA_5 82 253 IPR003593 GO:0016887
Pste9g01317 695 Pfam ABC-2 type transporter 379 585 IPR013525 GO:0016020|GO:0140359
Pste9g01317 695 Gene3D - 47 291 IPR027417 -
Pste9g01317 695 MobiDBLite consensus disorder prediction 1 27 - -
Pste9g01317 695 Pfam ABC-2 type transporter 253 309 IPR043926 GO:0140359
Pste9g01317 695 ProSitePatterns ABC transporters family signature. 196 210 IPR017871 GO:0005524|GO:0016887
Pste9g01317 695 FunFam ABC transporter G family member 11 47 290 - -
Pste9g01317 695 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 43 667 - -
Pste9g01317 695 Pfam ABC transporter 75 224 IPR003439 GO:0005524
Pste9g01317 695 CDD ABCG_EPDR 50 278 - -
Pste9g01317 695 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 53 296 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01317 Pste-Chr9 11814512 11820808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01317 83 284 Calmodulin-binding Proteins AT2G36910 32.394 3.26e-12 68.2