Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01297 TTGAAAGTTTGAAACTGAAAGCATCAACTGAGTTTCAACCACCGAACGAAAGCACTTCATATTTATATATACATTCACACGACGCTCACTCTGTTCTTCGCCAACCCCATCTCAGGCAAAGTATGCCTTTGAAGGAATCAAGTTGATCACAAAGGAATATCCAGTACTCTCAGATTTCATGCCTGCCATGAAAAAGAATCCTGATCAGAATCGTTTTGGGTCTGTGTTCAACAAGTTGGTGAAGGAGCTTGGTGAACCTGTAGACTTTGAACTTCCAGATTGGTTTCATAAATCGAAGCCAATGCAGTACACCTATGTAAAACGCAATATATATCTCACTAAGAAGGTCAAGAGATCCCGGGTTAAAGATGATGGCATATTCTGTTCCTGTACTCCTTCCCCTGAATCTACTAGTGTATGTGGTAGAGATTGCCACTGTGGGATGCTTCTGTCTAGCTGTTCATCAGGCTGTAAATGTGGGAACTCCTGTCTTAACAAGCCATTTCAGAATCGTCCTGTGAAAAAGATGAAATTGGTTAAGACCGAGAAATGTGGCTCTGGAATTCTGGCGGATGAAGATATTAAGCTTGGGGAGTTTGTCATTGAATATGTTGGAGAAGTCATTGATGATAAAACATGTGAGGAAAGGCTTTGGAACATGAAACATCGTGGAGAAACAAACTTCTACTTATGCGAAATCAATCGAGATAAGGTGATAGATGCTACATACAAGGGAAACAAGTCAAGATACATCAATCATAGTTGCTGCCCAAACACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCAACTCGTGACATACAAAAGGGCGAGCATCTGACTTATGATTACCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGTTGAGTGTAGGCGTAAGTTGGGTGTCCGAGCTACCAAGCCTAACACGTCTTCAGATGCTGCATTAAAATTAGTTACATATCAGGTTTATCAGAATGGAGGTTTGCAAATTGGAAGTTCTTGGGTTGTTGACCAACCAAAGTGCTTACACAATTGCATTGGTGAAGTTATTAGGATAAAACAAACTGAAAATGTGAGGTTTGGAATTATTAAACGATTTGATAAATATTCTAGAAAACACTCGATCATGTTTCAGGATGGTTGTGTTGAAATTTATGACATGTCCAAAGAGGACTGGGAACTTGTGAGAGAATGATGAGACTGTTAGGTAGGAACTACTTAGTGACGGTATCTCCTAATTGATGCAGTTTTATTTGTTGACTTGGAAATGATGAAATAATTCAGTTGACTTGTTTTTGGTAATGAACTGATTACTGATTACAGCGCCCCAGTAACACCTCGAAATCTCGTAATTGATACATTATTATTTGATTTGTTGACTTGAAAATGGTCAAATAATTCAGTTAGCTTGGTTTTGGTGATGAACTAATTAGCGCACCAGAGTAGCATCTCGAAAGTGTTTGGCTGTAGTTCTGTCATGGCATGTAAATGAATTTTCTCATCTCTCCTTTTATCTGCTTTTTGAAGAATGTTCCAACACTGGATGTAACAAATGCAAAATCATATGACA 1606 0.3873 MPAMKKNPDQNRFGSVFNKLVKELGEPVDFELPDWFHKSKPMQYTYVKRNIYLTKKVKRSRVKDDGIFCSCTPSPESTSVCGRDCHCGMLLSSCSSGCKCGNSCLNKPFQNRPVKKMKLVKTEKCGSGILADEDIKLGEFVIEYVGEVIDDKTCEERLWNMKHRGETNFYLCEINRDKVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIQKGEHLTYDYQFVQFGADQDCHCGAVECRRKLGVRATKPNTSSDAALKLVTYQVYQNGGLQIGSSWVVDQPKCLHNCIGEVIRIKQTENVRFGIIKRFDKYSRKHSIMFQDGCVEIYDMSKEDWELVRE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01297 350 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 37 306 IPR025787 -
Pste9g01297 350 Pfam SET domain 126 231 IPR001214 GO:0005515
Pste9g01297 350 FunFam Histone-lysine N-methyltransferase 30 270 - -
Pste9g01297 350 SMART set_7 115 238 IPR001214 GO:0005515
Pste9g01297 350 PANTHER SET DOMAIN PROTEINS 35 267 - -
Pste9g01297 350 SUPERFAMILY SET domain 26 244 IPR046341 -
Pste9g01297 350 ProSiteProfiles Post-SET domain profile. 238 254 IPR003616 -
Pste9g01297 350 ProSiteProfiles SET domain profile. 115 232 IPR001214 GO:0005515
Pste9g01297 350 CDD SET_ASHR3-like 116 254 - -
Pste9g01297 350 ProSiteProfiles AWS domain profile. 64 113 IPR006560 GO:0005634|GO:0042054
Pste9g01297 350 Gene3D SET domain 34 270 IPR046341 -
Pste9g01297 350 SMART shorttest3 64 114 IPR006560 GO:0005634|GO:0042054
Pste9g01297 350 SMART PostSET_3 238 254 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01297 Pste-Chr9 11473600 11482109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01297 88 253 C2H2 Transcription Factor Family AT2G23740 34.946 2.35e-23 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste9g01297 SET 4.2e-18 No_clan