Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01292 ATGATGGCAGCAGAGGACTCTACCAAGAGAAACTCCGGTGCTCAGCTCCTAGAAGAACTAGAGGCCCTTAGTGAATCCCTTTACCAATCACACACCTCAAACACGACTAGAAGAACTGCTTCATTAGCTCTACCAAGAGCCTCACCTCCTTTTGTCTCATCTGCTGAAGATGACAATGACACTGCTAAAGTTAGCAAAAAACAAAGCACCAAATCTCGGTCTCATCGCATGTCCTTGTCTCCATGGAGATCAAGAGCAAAGCCTGAAGATGCCAGGGAATCTCACACTCAGTCAGATACGAAAAAGTTTGATGACACGGAAAATTCAGGGGATAAGAAAGGGATTTGGAGCTGGAAGCCTATGAGGACCCTTGCTCATATTGGCATGCATAAACTAAGCTGTTTGTTTTCTGTTGAAGTGGTCACTGCTCAAGGCCTTCCCTCATCCATGAATGGTGTAAGGCTTTCTGTTTGTGTTAGAAAGAAGGAGACCAAAGATATAAGTGCTCAGACAATGCCATCGAGGGTGGATCAAGGTGCTGCAGATTTTGAAGAGATCCTTTTCATCAGGTGTCACGTTTATTACAACCATGGTAGTGGAAAGCAGCTTAAGTTTGAGCCACGACCATTTTGGATATACCTTGTGGCAGTTGACGCCAAAGAGCTTAGTTTTGGAAGAAACTGTGTAGACTTAAGCCAGTTGATTCAAGAATCCGTTGAGAAAAGCCAGCAAGGTATGCGTGTGAGGCAGTGGGACACAAGCTTTGGCTTATCAGGAAAGGCAAAAGGAGGAGAACTGGTTCTGAAACTTGGCTTCCAAATCATGGGGAAAGAAGGCGAAGTTCAGATATACAACCAGGAAGAGAATCTGAAGTCCAAAAGGTTTAAAAATCTCACTTCTCCATTTGCTCGCAAACAATCCAAGTCATCATTCAGCTTGCCTAGTCAAAGAATAACAAGCAGAAGTGATGCTTGGACTCCTTCACAGAGAAGGTTAGCTGAGGATATTCACGGTATAGATAATTTGATTCTTGATGATCCACACCTAGTTCATGATGCCCCTCCCTCTATCCCGAAACTTGTTGGTGGCAAAGAGAAGATGGAGGATTTTGATCTCCCAGATTTTGAGGTTGTTGATAAAGGGGTTGAGGTTCAAGAGAAGAAAGAATATGATGGAGAACGATCTGAGAAATCCATAGAAGTGAGGTCAGCTACAAGTGAGGTTGTCAAGGAAATACTGAATGATCATTTTCGTCTAACCAGATTAACTGAGCTTGATTCAATTTCCAAGCATATAAAGGCTCTTGAGTCCATGATGGGAGAAGATAACAATAAGTTCACAAAAGGTGAAGAAACTGAGTCACTAAGGTTGGATTCTGATGAAGAAATCGTGACAAGAGAGTTTCTTCATATGCTTGAGGATCAAAAGGCCCGAGGTTTCAAAGCCAATCAATCTGAAATTCCCCCATTACAAGTTGCAGAGGCTGAATCTAAAGTGTATCTTCCGGATCTTGGCAAGGGCTTGGGATGTGTGGTTCAAACAAGGGATGCAGGCTACTTGACATCTATGAATCCTTTAGATAATGCTGTGGCTAGAAATGAGACTCCAAAGCTAGCCATGCAGATGTCAAAACCTTATGTGTTGGCATCAAATCAGTCCCCAAATGGATTAGAGTTGTTTCAGAAATTGTCTGGCATTGGTTTTGATGAACTCAGCTCTCAAGTTTTCTCCATGATGCCCCTGGATGAACTGAATGGCAAAACTGCAGAACAGATTGCTTTTGAAGGCATTGCTTCTGCCATCATACAAGGAAGAAACAAAGAAGGAGCCAGTTCCAGTGCTGCACGTATAATTTCAGCCCTGAAAGGCATGGCCAATGCAATGAGTTCAGGAAGACAAGAACGGATTTCAACGGGACTTTGGAATGTAGATGAAAACCCACTCACAGCAGAGAAAATTCTAGCTTTCACAATGCAGAAGATTGAGTTCATGGCAGTTGAAGGGTTGAAAATCCAAGCTGGTATGGCAGAAGAAGAAGCTCCCTTTGATGTTTCTCCACTCAGCACAGAGGAAGGAAACAAAGAGAATGATCTATTAGGTTCTGCTGTTTCACTTGAGGATTGGATCAGAGACCAAAGCTACAGTAACACTTCCACAAGTTCTGATGGTGAGCCATCAAATATGACACTCATATTTGTTGTCCAACTGAGGGATCCAATGAGACGATTTGAAGCAGTTGGAGGTCCAGTGATGGTGCTCATTCATGCAACAAGTGAAGAAGACACAAAGGGAAGTGATCACCACCAAGATGATGAGGAGAAAAGGTTCAGGGTAACAAGCATGCATGTGGGAGGTTTGAAAGTAAGGAGTACTGCAAAGAATGCATGGGACAGTGAGAAGCAAAGGCTAACTGCCATGCAATGGTTGATTGAATATGGTTTAGGAAAGGCAGGGAAGAAAGGCAAGCTTGCATTGATAAAAGGACCAGACTCTTTGTGGAGCATTTCATCAAGAATCATGGCTGACATATGGCTCCAAACCATTAGAAATCCAGATGTCAAATTTACGCAAAAGGCAAAACAACGTTACCCTAAGGACCTTTCTCAGCTTGTGAATCTCTCCAGTTGGCCGGAGCAGACCTTCTTCTTCAATCGCCGCCGAGTCCGGTGGTTGTTGGTTGCCGGCGCCGCTGTTGCTACTGCTCCGACATTCAGGGATTGCAGGTTTGAAATGGCTGTGTCACTGTGGAGAAGTCGCACTGCTTCATCAGCACTGAACTTGTTCACCAATACTCTTCGCCATTTCTCTTCTGAGGTGACAAACACTAGTCCTCATAGTACACGAGAGAGTATGGTGAATCATATGATGTACTCTGACATAAACTCACGAATTGGGAGTTGCATGCCATTGTCTGCAATGCGCATTGGAACAATCATTCACAACATTGAGTTGAACCCAGGGCAAGGTGGCAAGCTTGTCCGAGCTGCTGGAACTAGTGCAAAGATCTTGAAAGAGCCGACATCAGCGTACTGTTTAATCCAACTGCCCTCAGGCGTTAAAAAGTTGATTGATTCTCGATGCAGGGCCACTGTTGGTGTTGTGTCTAATCCAAGCCATGGGGATCGCAAGCTTAAGAAGGCTGGACATAGCCGATGGCTTGGTCGAAGACCTGTTGTTCGAGGAGTGGCAATGAATCCTGTTGATCATCCTCATGGTGGAGGAGAGGGTAAGAGCAAGAGTAGTGGAAGATGGGGGCGAGGATCTCGCACTCCTTGGGGCAAGCCAACTAAGAGTGGTTACAAGACTGGACCCCTGAAGCGCAGAAGGTAGGTAGTATTATACAACATTCACTATAGCTGTTTCTGATGTTTCCTTGTGAGATGCTTGCAATAATTATGGACGCTGTCATTCCTGTTTATGAAATTCATGAAATTAATTAGGTTCAGTCAATTTTTGGATTTTATGGTTTCAAATTTTCTTGTTGTGGAAGTAAAATGTTTTTGAAATGCTTGCATTCAGCTTATTATATACCTCCGTTTGTTCACACTGACGGG 3554 0.4384 MMAAEDSTKRNSGAQLLEELEALSESLYQSHTSNTTRRTASLALPRASPPFVSSAEDDNDTAKVSKKQSTKSRSHRMSLSPWRSRAKPEDARESHTQSDTKKFDDTENSGDKKGIWSWKPMRTLAHIGMHKLSCLFSVEVVTAQGLPSSMNGVRLSVCVRKKETKDISAQTMPSRVDQGAADFEEILFIRCHVYYNHGSGKQLKFEPRPFWIYLVAVDAKELSFGRNCVDLSQLIQESVEKSQQGMRVRQWDTSFGLSGKAKGGELVLKLGFQIMGKEGEVQIYNQEENLKSKRFKNLTSPFARKQSKSSFSLPSQRITSRSDAWTPSQRRLAEDIHGIDNLILDDPHLVHDAPPSIPKLVGGKEKMEDFDLPDFEVVDKGVEVQEKKEYDGERSEKSIEVRSATSEVVKEILNDHFRLTRLTELDSISKHIKALESMMGEDNNKFTKGEETESLRLDSDEEIVTREFLHMLEDQKARGFKANQSEIPPLQVAEAESKVYLPDLGKGLGCVVQTRDAGYLTSMNPLDNAVARNETPKLAMQMSKPYVLASNQSPNGLELFQKLSGIGFDELSSQVFSMMPLDELNGKTAEQIAFEGIASAIIQGRNKEGASSSAARIISALKGMANAMSSGRQERISTGLWNVDENPLTAEKILAFTMQKIEFMAVEGLKIQAGMAEEEAPFDVSPLSTEEGNKENDLLGSAVSLEDWIRDQSYSNTSTSSDGEPSNMTLIFVVQLRDPMRRFEAVGGPVMVLIHATSEEDTKGSDHHQDDEEKRFRVTSMHVGGLKVRSTAKNAWDSEKQRLTAMQWLIEYGLGKAGKKGKLALIKGPDSLWSISSRIMADIWLQTIRNPDVKFTQKAKQRYPKDLSQLVNLSSWPEQTFFFNRRRVRWLLVAGAAVATAPTFRDCRFEMAVSLWRSRTASSALNLFTNTLRHFSSEVTNTSPHSTRESMVNHMMYSDINSRIGSCMPLSAMRIGTIIHNIELNPGQGGKLVRAAGTSAKILKEPTSAYCLIQLPSGVKKLIDSRCRATVGVVSNPSHGDRKLKKAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGRWGRGSRTPWGKPTKSGYKTGPLKRRR 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01292 1109 MobiDBLite consensus disorder prediction 1063 1109 - -
Pste9g01292 1109 MobiDBLite consensus disorder prediction 27 42 - -
Pste9g01292 1109 Gene3D - 953 1034 IPR014722 -
Pste9g01292 1109 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 130 252 IPR019448 -
Pste9g01292 1109 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 6 478 IPR039614 -
Pste9g01292 1109 ProSitePatterns Ribosomal protein L2 signature. 1057 1068 IPR022671 GO:0003735|GO:0005840|GO:0006412
Pste9g01292 1109 Pfam Ribosomal Proteins L2, C-terminal domain 964 1093 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pste9g01292 1109 FunFam 50S ribosomal protein L2 1035 1109 - -
Pste9g01292 1109 FunFam 60S ribosomal protein L2, mitochondrial 958 1034 - -
Pste9g01292 1109 MobiDBLite consensus disorder prediction 27 110 - -
Pste9g01292 1109 MobiDBLite consensus disorder prediction 82 110 - -
Pste9g01292 1109 SUPERFAMILY Translation proteins SH3-like domain 964 1098 IPR008991 -
Pste9g01292 1109 ProSiteProfiles C2 NT-type domain profile. 124 276 IPR019448 -
Pste9g01292 1109 Gene3D Ribosomal protein L2, domain 3 1035 1109 IPR014726 -
Pste9g01292 1109 SMART Ribosomal_L2_C_2 962 1095 IPR022669 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01292 Pste-Chr9 11425797 11435181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01292 961 1074 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 43.333 1.11e-22 97.1