Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01280 TTTGTCACTTCCACGGCCACTTCCTTCTTTGGCCTCCAAGAGACAAGAAAAACACACACAACCAGACACAAACACTGGTGTTACAAAATCTAGTAAAACAGTCTCCATAACCACAAACCTCAGTTAAAAAAAAAAAAAAATTCAGCTTGATCGAATCCTCAACCATTTTCATCTGAACATGGCTTGTTCAGTGCATGTCCTTCTTCTGAGCTCAATCTGGCTTTTACTCTGGAACCCAGCATGTGTCTATGGTAATGATGAACTTGGAGCACTTTTGGACCTGAAGTCCAGTTTGGATCCAGAGGGTCATTTTCTTTCCTCATGGACCATGTATGGCAATCCATGTGGTGGTTCCTTTGAGGGGGTGGCTTGCAATGAGAAGGGTCAGGTAGCAAATGTTTCTCTTCAGGGAAAAGGCCTCTCTGGGAGGCTTTCACCAGCCATTGCTGGACTCAAGCACTTGACAGGACTCTACCTGCATTACAACTCTTTGTATGGGGAGATTCCAAGGGAAGTTGCAAACTTGACTGAGCTCAGTGACTTGTACTTGAATGTGAATCACTTGTCTGGTGAAATCCCACCTGAGATTGGCAAGATGGAGAATCTGCAAGTTTTGCAGTTTTGTTATAATCAGTTAACAGGAAGCATACCTACACAGCTTGGTGATTTGAAAAAACTCAGTGTCCTTGCTCTTCAGTCAAACCTGTTGGCTGGAGCTATCCCTGCCAGTCTAGGTGATTTGGGAATGTTGATGAGGCTAGACTTGAGCTCTAATCATCTCTTTGGTTCCATTCCCACTAAATTAGCTGATCTTCCTTCACTGCAAGTTCTAGATGTTCACAACAATACACTCTCTGGGAATGTACCTCCTGGTAGTAATGATGCTGCTGCTTTGATTTTATTTTATTCTCTGAAGAGACTAGAGGATGGATTTGTGTATGAACAGAACATGGGGTTATGTGGAATAGGATTTTCTTCCTTGAAAGCTTGCACTACTTCAGATCATGTCAATCTCACCCGACCTGATCCTTATGGAACAGGAGTTGGTGGTCTGTCTAGAGATATCCCAGAAACTGCTAATGTAAAGTTGCCTTGCAATTCGACTCAGTGCCGAGGTTCATCAAAATCTAAACAAGCAACATCTATTACAGTTGGCATTGTTCTGTCTACAATTACATTATCAGCAGTTGGTGTTTTGACTTTCACTATGTATCGTCGGCGGAAACAAAGGCTTGGAAGTGCGTTTGATATCTCTGAAGGCCGTCTAAGTACAGATCAAGCCAAGGGTATATACAGGAAAAATGGATCACCTTTGGTTAGCCTTGAATATTCTAATGGATGGGACCCTTTGGCTGATAGCAGGAATTTCAGTGAGGATAAGCAAGATATGTTCCAAAGTTTCAGGTTCAATTTGGAAGAAGTGGAGTCAGCTACTCAGTATTTCTCGGAGTTGAATTTGTTGGGAAAGAGTAACTTTAGTGCAACGTATAAGGGAGTTTTAAGAGATGGATCTGTAGTTGCTGTCAAGAGCATCAGTAAAACTAGTTGCAAATCTGATGAAGCTGAGTTTTTGAAGGGATTGAACATTTTGACCTCACTGAGGAATGAGAATTTAGTGAGGTTGAGAGGATTATGTTGTTCAAGGGGACGAGGTGAATGCTTCCTGATTTATGATTTTGTTGCTTCTAATGGAAATCTGTCGCACTACCTTGACGTGAAGGAAGGTGATGGAGAAGTCCTCGAATGGTCAACTAGAGTTTCTATTGCAAAAGGGATTGCAAAAGGCATAGCATATTTACATTCATACAAAGCAAATAAACCAGCTCTTGTTCACCAGAACATCTCAGCTGAGAAGGTACTTATTGATCAACGGTACAGCCCAATGCTTTCAGATTCCGGCGTTTACAAGCTTCTCACCAATGACATTGTCTTCTCTGCGCTAAAGGGTAGTGCTGCAAAGGGTTACCTGGCTCCAGAATACACCACTACCGGTCGGTTCACAGAGAAAAGTGATGTTTATGCATTTGGTGTACTACTTTTCCAGATCCTCACGGGGAAGCAGAAGATCACAAGTGCTGTGCGCCTTGCTGCAGAATCTTTCAAATTTGAAGAATTTATTGATGTGAACTTGCACGGAAGGTTCTTCGAATACGAGGCAGCTAAACTAGCTAGAATGGCCTTACTTTGCTCCCATGAGTCTCCATTTGAGAGGCCAAGCATGGAAGCCATTGTTCAAGAACTGGGCAATTGTAGTAGCTGTCTTTGATTTCAATTTTTCTTCAATTAATTTAACCATCGACACCACACCAGTTTCTAAGCATTTGGCCACTGGCTCATGGTCATGGTGATGGTGACCTTGTAAGGCATGACTTTTTTCTGTCCTTAACTAAGGACTAGCTTTTATGTGAATGAATGTCATGGACATTAGGTTGTAGCTATTAGGAAAGGAATTTTTATTTTTATTCATTTCAGCCATTTATTTCCTCTAATAATCTGTCATTGTGTTTTTTCTTTTTCTTTTGGGCTGTGTGGTTAAGTCATAAATTCACCCCTTTCCAACCAAC 2564 0.4165 MACSVHVLLLSSIWLLLWNPACVYGNDELGALLDLKSSLDPEGHFLSSWTMYGNPCGGSFEGVACNEKGQVANVSLQGKGLSGRLSPAIAGLKHLTGLYLHYNSLYGEIPREVANLTELSDLYLNVNHLSGEIPPEIGKMENLQVLQFCYNQLTGSIPTQLGDLKKLSVLALQSNLLAGAIPASLGDLGMLMRLDLSSNHLFGSIPTKLADLPSLQVLDVHNNTLSGNVPPGSNDAAALILFYSLKRLEDGFVYEQNMGLCGIGFSSLKACTTSDHVNLTRPDPYGTGVGGLSRDIPETANVKLPCNSTQCRGSSKSKQATSITVGIVLSTITLSAVGVLTFTMYRRRKQRLGSAFDISEGRLSTDQAKGIYRKNGSPLVSLEYSNGWDPLADSRNFSEDKQDMFQSFRFNLEEVESATQYFSELNLLGKSNFSATYKGVLRDGSVVAVKSISKTSCKSDEAEFLKGLNILTSLRNENLVRLRGLCCSRGRGECFLIYDFVASNGNLSHYLDVKEGDGEVLEWSTRVSIAKGIAKGIAYLHSYKANKPALVHQNISAEKVLIDQRYSPMLSDSGVYKLLTNDIVFSALKGSAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILTGKQKITSAVRLAAESFKFEEFIDVNLHGRFFEYEAAKLARMALLCSHESPFERPSMEAIVQELGNCSSCL 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01280 695 Pfam Protein tyrosine and serine/threonine kinase 426 688 IPR001245 GO:0004672|GO:0006468
Pste9g01280 695 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Pste9g01280 695 SUPERFAMILY L domain-like 24 233 - -
Pste9g01280 695 Pfam Leucine rich repeat 166 225 IPR001611 GO:0005515
Pste9g01280 695 ProSiteProfiles Protein kinase domain profile. 422 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01280 695 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Pste9g01280 695 SMART LRR_typ_2 212 236 IPR003591 -
Pste9g01280 695 SMART LRR_typ_2 164 188 IPR003591 -
Pste9g01280 695 SMART LRR_typ_2 116 140 IPR003591 -
Pste9g01280 695 SMART LRR_typ_2 92 115 IPR003591 -
Pste9g01280 695 Gene3D Phosphorylase Kinase; domain 1 391 500 - -
Pste9g01280 695 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 73 689 - -
Pste9g01280 695 SUPERFAMILY Protein kinase-like (PK-like) 399 688 IPR011009 -
Pste9g01280 695 Gene3D Transferase(Phosphotransferase) domain 1 502 694 - -
Pste9g01280 695 Gene3D Ribonuclease Inhibitor 181 238 IPR032675 -
Pste9g01280 695 FunFam Protein NSP-INTERACTING KINASE 2 393 500 - -
Pste9g01280 695 FunFam Protein NSP-INTERACTING KINASE 2 25 174 - -
Pste9g01280 695 FunFam Protein NSP-INTERACTING KINASE 2 502 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01280 Pste-Chr9 11299175 11303076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01280 3 536 Miscellaneous Gene Families AT4G22730 54.862 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pste9g01280 PK_Tyr_Ser-Thr 8.5e-36 CL0016