Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01272 ATTTACTCCTTTTCTTGCAAAACCCTAATTTCATATTTCACTCCGGAGAATTTGTGAAGCAGAAATGTTATTTTCTCTGTTATTGTAGTTTTTTTTCCCTAAAAATTGTTATTTTTGGAAGCTCTTTTCGCTATCTGCAATGGTGGAGATTTGAGCCACAGCGTCGCGTCTTTCTCGGAGTTCACCCTCAACCGTTCAAATTTCTGCTTCTGGGTTTTCGTCATTTTAGACAAAACTTTCTGTTTTTTAAGTTTTTATGTTCAGTTACAACTTTTTCTGTGCTCAAACGTCATTGTACTGTTTCTGGGTACGTTAGTTCTGCATTCCAGTACATTTGTCTTCACCAAGTTCAATTTTTTCCACTGCTTGTGAGTTTCTAAATTCTGTGAACCTTCAATGAGTAGGGTTTAAGCGTGATTTAAGGTTTTGGGGTGTTTTAGTTTTTCTTTGATTCGCAAGAAAATGGAGGAAAGAGAGATTTTTAGTTCTGCACATGTGGTTAAGGCTGTCGAGGCCCCCCAGAGCTTCCACGTGTCACTGAACACCCTGCAGTTTTCCGGGCCCACGGTGGAGCCGCCTGCATCGACGCCGGTACCAGCGCCGGTGAGCACTCCGGTGATGACTTCCGGTAGTATGGAGGGGAAGAAGAAGAGGGGCAGGCCAAGGAAATATGGACCTGACGGTAAGGTGGCAGCACTGTCGCCAATGCCGATATCATCATCGATTCCGTTGACCGGAGACTTCTCAGCCTGGAAAAGGGGAAGAGGAAAGCCTCTTGAATCATCAATCAAGAAATCTTTCAAGTTTTTTGAAGCTGAAGGTGCAGGACCAGGTGATGGAATTGCATACTCAGTTGGTGCCAATTTCACACCTCACATCCTTACAGTAAATGATGGCGAGGATGTTACCATGAAGATTATGTCCTTCTCCCAGCAAGGATGTCGAGCAATTTGCATTCTGTCCGCAAATGGTACAATTTCAAATGTTACACTACGCCAACCAACTTCATGTGGTGGTACTTTAACATACGAGGGGCGGTTTGAAATTCTTTCCTTGTCTGGTTCTTATATGCCAACTGAGAATGGGATAACAAAGAGCAGATCTGGTGGGATGAGTGTTTCTTTGGCTGGTCCAGATGGTCGAGTAATGGGGGGTGGACTGGCTGGTTTGCTGGTAGCATCCGGTCCTGTGCAGGTTGTTGTGGCTAGTTTTCTTCCCGGACACCAGCTGGAGCAGCAGAAACAGAAGAAACCAAGGGTGGAGCATATATCAATGACTGCCACTGCCCCTACACATGTCAACCCTACTTCGGCTGAAGAAATAAGAATTGGTCTTGGTGGAGTAAAACCAATAATGACACCTGCTGCTTTTCAAGTGGAAAACATTTTCGGCAATGGTCAAAGCTCTAGGAATTCACCTTCTGATGATGAAGCTCCTTTCCCTGAAAGAGAGTCTAACCCTGGCCATGCAGATGGAGGAGTTGCTTGCTAAACATATTCCCTGCCAAGTATTTGGTGTTCTGCAAACTCAAACCCTGTTTAGGCTCACTCGTGCTTCACTGATGCTGACAATTAACTTGACAAAGGTCTTATAGTGGGATGAGTATCAGGTTGGTTTTGACTTGAGAAATTGTTCTCTTTGGTACTAGGTATTAGTGTAAGGAAATCTACTTGTTAGGCTTTCGATGTCTCTGTTTTGATGATGCATATCTAGTATTGTTTACTCAGTTGTAGCAGCTAGATGTAGGATATATGTTATGCCACGATTTAGATTTTATAAATTGTTTGAAATGAGTGCATGTGGGTGATTTCTAAACAGTTTACCTAACAATATTATTTGTTGTGAAGGAGGAAATTATATTTTAGTATTTTG 1872 0.4284 MEEREIFSSAHVVKAVEAPQSFHVSLNTLQFSGPTVEPPASTPVPAPVSTPVMTSGSMEGKKKRGRPRKYGPDGKVAALSPMPISSSIPLTGDFSAWKRGRGKPLESSIKKSFKFFEAEGAGPGDGIAYSVGANFTPHILTVNDGEDVTMKIMSFSQQGCRAICILSANGTISNVTLRQPTSCGGTLTYEGRFEILSLSGSYMPTENGITKSRSGGMSVSLAGPDGRVMGGGLAGLLVASGPVQVVVASFLPGHQLEQQKQKKPRVEHISMTATAPTHVNPTSAEEIRIGLGGVKPIMTPAAFQVENIFGNGQSSRNSPSDDEAPFPERESNPGHADGGVAC 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01272 342 MobiDBLite consensus disorder prediction 33 75 - -
Pste9g01272 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 36 318 IPR039605 GO:0003680
Pste9g01272 342 Gene3D - 137 276 - -
Pste9g01272 342 FunFam AT-hook motif nuclear-localized protein 1-like 137 268 - -
Pste9g01272 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 250 IPR005175 -
Pste9g01272 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 253 - -
Pste9g01272 342 CDD DUF296 136 250 IPR005175 -
Pste9g01272 342 ProSiteProfiles PPC domain profile profile. 132 276 IPR005175 -
Pste9g01272 342 MobiDBLite consensus disorder prediction 310 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01272 Pste-Chr9 11154787 11160509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01272 54 266 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 64.444 9.57e-89 270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01272 9 11154787 11160509 Pste4g00452 4 3441544 3448480 ECH
Pste9g01272 9 11154787 11160509 Pste9g01272 9 11154787 11160509 ECH
Pste9g01272 9 11154787 11160509 Pste4g00452 4 3441544 3448480 PCT