Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01263 ATGCAAGCTGTGTTGTTGAGAGGCCACTTGCTGTTGCTTTTTGTGGCAATCCAGCTTATAATGCTTCTTTCTGCGTGTGCTTCACCCCGCAGTGATGAAGGACAAGCATTGGTGAAGATTAAGGCTTCATTCAGCAATGTTGCAGATGTTCTGCATGATTGGGATGATTTGCATAATGATGACTTCTGTTCCTGGCGTGGAGTCATGTGTGACAATGCCACCCTTACTGTGCTTTCTCTGAACTTGTCAGGCTTGAACCTGGGTGGGGAGATTTCACCGGCCATTGGTGACTTACCAAACTTGCAAGCCATAAACCTCCAGGGAAATAAACTAACTGGTCAAATTCCAGACGAAATTGGGAACTGTGCTTCACTGATTTCTCTGGATTTGGCTGATAATCACTTGTATGGTGATATACCCTTCTCCATATCAAAGCTAAAGCAACTTGTTCATCTGAATTTAAAGAGTAATCAGTTGACTGGTCCTATTCCTTCAACTTTATCCCAAATTCCAAACTTGAAGACTCTTAATCTTGCACGAAATAGACTCACTGGTGAAATTCCAAGCTTACTCTACTGGAATGAAGTTCTGCAGTACCTCGCGTTGCGAGAGAACATGTTGAGTGGAACTCTGTCCCCTGATATGTGTCAGTTAACCGGTCTGTGGTATTTTGATGTTAAAGGCAACAATTTGACTGGCACCATACCTGAGACCATTGGAAACTGTACCAATTTTGAAATCTTGGATCTATCATATAATCAGATTTCTGGGGAGATTCCCTATAATATTGGATTCCTTCAAGTAGCTACTTTGTCACTCCAAGGAAATAGATTGACGGGAAAGATTCCAGAAGTTATTGGTTTAATGCAAGCCCTTGCCATTTTGGATTTGAGTGAGAATGAACTGACAGGGCCCATTCCTCCCATACTAGGGAATTTGTCTTTTACGGGCAAGCTGTACCTTCATGGAAACATGATCACTGGACCAATACCTCCAGAACTTGGCAATATGTCACGACTAAGCTATCTGCAATTGAATGACAATCAACTAGTTGGCCAAATTCCTGGTGAACTTGGGAAGCTTGAACATTTGTTTGAATTGAATCTTGCCAATAATCATCTTGAAGGATCTATTCCGAATAACATTAGCTCTTGTACTGCCTTGAATAAGTTTAATGTGCATGGAAATCATTTAAGTGGTTCAATTCCTTTGAGCTTTAGCAGCCTTGAGAGCATGACTTACTTAAATCTTTCTGCAAACAACTTCAAAGGGAGTATACCTGTTGAGTTGGGCCATATCATAAATCTAGATACGCTGGATCTATCTAGCAATAATTTTTCAGGACATGTTCCAGGGTCTGTTGGTTATCTTGAGCATCTTCTTACTTTGAACTTGAGCCATAATAGTCTTCAGGGCCCCGTGCCTGCTGAATTTGGGAATCTTAGAAGCATACAAATTATGATCCATAATAATTTTGTTTCTACTTCTAGTGATATGTCATTCAACTACCTGTTGGGTAGCATCCCTCCTGAAATTGGTCAGCTGCAGTATCTTGTTTCTCTGATTTTAAACAACAATCATTTGCGTGGGAAGATTCCAGATCAGCTTACCAATTGCTTAAGTCTTAACTTCCTGAATGTCTCGTATAATAACTTATCCGGGGTCATTCCTCTTATGAAGAACTTCTCACGGTTTTCTGCTGACAGCTTTATTGGGAACCCTTTATTATGTGGAAATTGGTTAGGATCCATATGTGATCCTCACATGCCAAAATCCAGAGTGGTGTTTTCAAGGGGTGCAGTTGTTTGTCTCGTAGTTGGTACTGTCATATTATTGGCCATGGTAACTATTGGTATCTACCGATCAAGCCACTCAATGCAATTAACTAAAGGATCTAGTGGAACTGGGCAAGGCATGTTGAACATAAGAATTGCTTATGTTTACTGGCCACCCAAGCTTGTAATTCTTCATATGGGTTTAGCAATCCACACCTTTGATGATATTATGAGAGTTACTGAGAATCTCGATGAGAAGTATATTGTAGGTTATGGTGCCTCTGGTACTGTATACAAATGTGTTTTGAAGAATTCCCGGCCAATTGCAATTAAACGATTATACAACCAGTATCCACATAACTCAAGGGAGTTTGAGACAGAACTTGAAACTATTGGCAGTATCAGACACAGGAATCTTGTCACTTTGCATGGTCCCTTGAAAAAGGTAAAACTTGATTGGGAGGCACGCTTGAGGATTGCAGTGGGAGCTGCTGAAGGACTTGCTTACCTCCATCATGACTGCAATCCTAGAATCATTCACAGGGATATAAAGTCCTCAAATATCCTGATAGATGAAAACTTTGAAGCTCGCCTCTCTGATTTTGGCGTTGCCAAATGTCTGTCAACTACAAGAACTCATGCATCAACTTTTGTTCTTGGAACTATAGGCTATATTGACCCTGAGTATGCCCGGACATCTAGGTTGAATGAAAAATCCGATGTGTATAGCTTTGGCATTGTTCTACTTGAGCTACTAACTGGGAAGAAGGCAATATTATCGAAGGCAGATAACAACACTATAATGGAAACTGTGGATCCTGAGGTGTCTGTTACCTGCATGGATCTGATCCATGTTAAGAAGACCTTTCAGCTTGCTCTTCTTTGCACAAAAGGAAATCCTTCCGAAAGGCCAACCATGCATGAGGTTGCCAGGGTTTTGGCATCACTACTTCCAACACCTCCCAATAAAAACATCTTTGCCCCTCCTTCAAAGACCATTGATTGTTCACAATATGTCGTACAAAAGGGAAATCCCCTGCACCAGTCAGAAATGAACAGGCTACAACCTCAGCCAAAGTACTCTAATGATCAATGGTTTGTTCCTTTTGAAGATGTATCAAATAACAGCCTCTAGGCACTTCATACTCGTATATCCACGATTCATGTCAAAGACAAAGGTGGTGTGAAGAAAGGGTGGGAGAGAGAACTCTAATATTTTTGGAAATTATATCGTAATTTTTCCTGAAATGAAACCATTGGATTCTTACACTTTTAAGACTATTAGTCTTCTAGATTGACAGTAAAAAGATAGCCGTATAGAAAGTTTCAAATATATTTGTACAAGTATTTCTCGTCAGAAATGGTATCTAGTACTGGTGGTCATTCGAATGTTTCCTGCAAACATAGCTTCTGTCAATTGAACTACATAGAAGCATGCCAAGTAGTGCGCCCAACCTTAACTGGTTTGTAAGGCCATGTAATCTTACGATGGTTAATGTTC 3276 0.4038 MQAVLLRGHLLLLFVAIQLIMLLSACASPRSDEGQALVKIKASFSNVADVLHDWDDLHNDDFCSWRGVMCDNATLTVLSLNLSGLNLGGEISPAIGDLPNLQAINLQGNKLTGQIPDEIGNCASLISLDLADNHLYGDIPFSISKLKQLVHLNLKSNQLTGPIPSTLSQIPNLKTLNLARNRLTGEIPSLLYWNEVLQYLALRENMLSGTLSPDMCQLTGLWYFDVKGNNLTGTIPETIGNCTNFEILDLSYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELTGPIPPILGNLSFTGKLYLHGNMITGPIPPELGNMSRLSYLQLNDNQLVGQIPGELGKLEHLFELNLANNHLEGSIPNNISSCTALNKFNVHGNHLSGSIPLSFSSLESMTYLNLSANNFKGSIPVELGHIINLDTLDLSSNNFSGHVPGSVGYLEHLLTLNLSHNSLQGPVPAEFGNLRSIQIMIHNNFVSTSSDMSFNYLLGSIPPEIGQLQYLVSLILNNNHLRGKIPDQLTNCLSLNFLNVSYNNLSGVIPLMKNFSRFSADSFIGNPLLCGNWLGSICDPHMPKSRVVFSRGAVVCLVVGTVILLAMVTIGIYRSSHSMQLTKGSSGTGQGMLNIRIAYVYWPPKLVILHMGLAIHTFDDIMRVTENLDEKYIVGYGASGTVYKCVLKNSRPIAIKRLYNQYPHNSREFETELETIGSIRHRNLVTLHGPLKKVKLDWEARLRIAVGAAEGLAYLHHDCNPRIIHRDIKSSNILIDENFEARLSDFGVAKCLSTTRTHASTFVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAILSKADNNTIMETVDPEVSVTCMDLIHVKKTFQLALLCTKGNPSERPTMHEVARVLASLLPTPPNKNIFAPPSKTIDCSQYVVQKGNPLHQSEMNRLQPQPKYSNDQWFVPFEDVSNNSL 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01263 969 Gene3D Transferase(Phosphotransferase) domain 1 736 916 - -
Pste9g01263 969 Pfam Leucine Rich repeat 241 258 IPR001611 GO:0005515
Pste9g01263 969 ProSitePatterns Protein kinases ATP-binding region signature. 681 703 IPR017441 GO:0005524
Pste9g01263 969 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 30 194 - -
Pste9g01263 969 ProSiteProfiles Leucine-rich repeat profile. 172 194 IPR001611 GO:0005515
Pste9g01263 969 SUPERFAMILY L domain-like 60 324 - -
Pste9g01263 969 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 726 916 - -
Pste9g01263 969 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Pste9g01263 969 SMART LRR_typ_2 515 539 IPR003591 -
Pste9g01263 969 SMART LRR_typ_2 98 122 IPR003591 -
Pste9g01263 969 SMART LRR_typ_2 457 480 IPR003591 -
Pste9g01263 969 SMART LRR_typ_2 170 194 IPR003591 -
Pste9g01263 969 SMART LRR_typ_2 218 242 IPR003591 -
Pste9g01263 969 SMART LRR_typ_2 409 433 IPR003591 -
Pste9g01263 969 SMART LRR_typ_2 289 313 IPR003591 -
Pste9g01263 969 SMART LRR_typ_2 361 385 IPR003591 -
Pste9g01263 969 SMART LRR_typ_2 146 169 IPR003591 -
Pste9g01263 969 Pfam Protein kinase domain 750 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01263 969 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 195 304 - -
Pste9g01263 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 770 782 IPR008271 GO:0004672|GO:0006468
Pste9g01263 969 Gene3D Ribonuclease Inhibitor 316 588 IPR032675 -
Pste9g01263 969 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 646 742 - -
Pste9g01263 969 SMART serkin_6 675 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01263 969 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 319 905 - -
Pste9g01263 969 SUPERFAMILY Protein kinase-like (PK-like) 656 914 IPR011009 -
Pste9g01263 969 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 305 588 - -
Pste9g01263 969 Gene3D Ribonuclease Inhibitor 30 193 IPR032675 -
Pste9g01263 969 Gene3D Ribonuclease Inhibitor 194 309 IPR032675 -
Pste9g01263 969 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Pste9g01263 969 Gene3D Phosphorylase Kinase; domain 1 655 735 - -
Pste9g01263 969 ProSiteProfiles Protein kinase domain profile. 675 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01263 969 Pfam Leucine rich repeat 435 485 IPR001611 GO:0005515
Pste9g01263 969 Pfam Leucine rich repeat 125 183 IPR001611 GO:0005515
Pste9g01263 969 SUPERFAMILY RNI-like 235 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01263 Pste-Chr9 11041628 11050285 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01263 100 969 Receptor kinase-like Gene Family AT5G07180 70.011 0.0 1223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Pste9g01263 Pkinase 3.1e-26 CL0016