Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01245 CTAGAAATAGCTCAGTGGCCCAAATCTGCTCTTTGTGCCCCCATATCCAACGCTAAGGATAGTTTAGAGTACTGATTGAATTGAGAGAGTACCATGTTTCCTTTACAACGAGGCAATGAGCTGGTTATCCAGTTTTCTAATAGCCCCCACCAGCAGCAACACAAAATCTCTGAAGATCTGATTCTGGATGATTATGCTTCTCTGGATGTCAATGATTCTATTTCTCACCAAAAATCCAATACTAGCCAACCGAAGAAACTTTATTATGGAGCAAATAAGAAGAATCATCATGACTCTAACGAACATAAGAAGAAGATGATTCATAAGGAGATTGAAAGACAAAGGAGACAAGAAATGGCTACCTTCTATGCCTCTCTTAGATCCCTTCTCCCTCTTGAATTCATCAAGGGAAAACGTTCAATATCTGACCACATGAATCAGGCAGTGAAATACATAAAGCACACGCAGAAAAATATCAAAGTACTTGGTGCCAAAAGAGATGAACTGAAGAAACTCTCTAATTATTCCAATATGGAAAATAGCCATGAGGCCTTGCATACATCTTGCAACTTTACTGTCCACGAGAATAATGGTATTATGGGAATCGAAATCACCAGTGGCTTCAGAGAGGAAAAGCCAAAACTTTCAAAGTTACTACAGTTCCTGATTGACGAAGGTCTTGAAGTTACTAGTTGCCTTTCAACCGAAGTCAATGGCAGATTACTCCACAGTGTGCAGTGTGAGGTTAACAGTTCCAACAGTGTAGAACTATCTGAGCTGAGAAATAAAGTTTCCAATGCATTTCCAACATTTAGATGTTCTGATTAACTTTGTGGTTGGAGTTAGTTAGCCTAAAATCTTGTGATCAATGGCAGGAAATTTACCCATAACGTGCGTTTTGAAATCTAATAACTAACTGGGTAGAGCTAGACTTTGTTTGGATGAGTTTACTTGCAAATTTTACTTTGGCAAATGTCCGGGCCCCTTTTCTCTTTTGGTTTGAACTTAATTTGTTGTTTTAATTGCTAGTGAAGAACGAGGGAAGAAGAAAGAAAAACTATATACATCAAAATTTCATTCCTTTTCCCTAATTCCTTTCACAGCTTTTCTGTGATCAAATGGATACAGTTTCTGTCTTTGCTTTTTGAAATTTTGTTTCATTGCAAGTTGTACCTTCAACGTGTCTATAATTGAACGTAGAAGTTTATGAGAATCTGATTAAAGTAAAAGTTTATGAGGTTATCTTAACATGAGAAATATCTTATCTTATCCATCATACCTGAATGTATATATATATGTGATTTTTAAGATCATCAATCTAGCTTTCAATTTTCATCAATCACTCTTACCTTGAATTATCCCACACAATTTGAAACTGGG 1380 0.3645 MFPLQRGNELVIQFSNSPHQQQHKISEDLILDDYASLDVNDSISHQKSNTSQPKKLYYGANKKNHHDSNEHKKKMIHKEIERQRRQEMATFYASLRSLLPLEFIKGKRSISDHMNQAVKYIKHTQKNIKVLGAKRDELKKLSNYSNMENSHEALHTSCNFTVHENNGIMGIEITSGFREEKPKLSKLLQFLIDEGLEVTSCLSTEVNGRLLHSVQCEVNSSNSVELSELRNKVSNAFPTFRCSD 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01245 244 CDD bHLH_AtORG2_like 73 143 - -
Pste9g01245 244 SMART finulus 78 130 IPR011598 GO:0046983
Pste9g01245 244 Pfam Helix-loop-helix DNA-binding domain 73 125 IPR011598 GO:0046983
Pste9g01245 244 Gene3D - 63 158 IPR036638 GO:0046983
Pste9g01245 244 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 60 231 - -
Pste9g01245 244 FunFam Transcription factor bHLH126 64 152 - -
Pste9g01245 244 MobiDBLite consensus disorder prediction 42 57 - -
Pste9g01245 244 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 124 IPR011598 GO:0046983
Pste9g01245 244 MobiDBLite consensus disorder prediction 42 72 - -
Pste9g01245 244 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 140 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01245 Pste-Chr9 10749891 10751866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01245 67 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 42.857 8.48e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste9g01245 HLH 2.3e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01245 9 10749891 10751866 Pste9g01245 9 10749891 10751866 ECH
Pste9g01245 9 10749891 10751866 Pste4g01732 4 12975279 12976726 PCT