Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01233 CAACAATTGAAAGTACTGTTGGTTAAATCTTATTATCCCCGAAAGCTTGAGATTAGAGACAGAGAGGAAATGGGTAAGGGAGGAATGTCTATTGATGAGCATGGAGAAGGCAAAGAAGAGAATATGGCTGCTTGGCTTGTTGGAATAAACACTCTAAAGATTCAACCTTTCAACCTTCCTACTCTTGGACCCCATGATGTCAGAGTTAGAATGAAGGCTGTTGGTATCTGTGGGAGTGATGTTCACTACCTCAAGACGCTGAGGTGTGCACACTTTATAGTTAAGGAACCAATGGTTATTGGTCATGAGTGTGCTGGGATCATAGAAGAAGTTGGTAGTCAGGTTAGGAGCTTGGTGCCTGGTGACCGTGTGGCGATTGAACCTGGGATCAGTTGTTGGCGTTGCAACCACTGTAAACAGGGTCGATATAATTTATGCGATGATATGAAGTTTTTTGCTACCCCTCCAGTTCATGGTTCCCTGGCTAATCAGATAGTGCATCCTGCAGACCTATGTTTTAAGCTGCCAGACAATGTAAGCCTGGAGGAGGGGGCAATGTGTGAACCCTTAAGTGTTGGTGTTCATGCTTGTAGGAGAGCTAATATTGGACCAGAAACAAATGTGTTGATCATGGGAGCAGGACCAATAGGACTTGTTACAATGCTTGCAGCTCGTGCTTTTGGGGCACCCAAGACAGTCATTGTGGATGTCGATGACCATCGTTTATCGGTTGCAAAATCTCTTGGTGCAGATGATATTGTTAAAGTCTCAACAAACATTCAGGATGTGGCTGAAGAAGTTGTGCAGATACAAAAGGTTATGGGAGCTGGTATAGATATTACCTTTGATTGTGCTGGTTTTGACAAAACCATGTCTACAGCACTGAGTGCTACTAAGCCAGGTGGCAAAGTTTGCCTTGTGGGAATGGGACATTCTGAAATGACTGTCCCCCTCACCCCAGCTGCAGCAAGGGAAGTTGATGTGGTTGGAGTTTTTCGCTACATGAACACATGGCCTCTTTGCCTTGAATTTCTAAGGAGTGGAAAAATCGATGTAAAACCCCTTATAACTCACAGGTTTGGGTTCTCTCAAAAGGAAGTGGAAGAAGCCTTCGAAACAAGTGCTCGTGGTGGTAATGCCATCAAGGTCATGTTCAATCTTTAGATACTGAACTGTGACTTTATAAACTGTCTTATTTTAACAAAGTATGTGATTACACGTTCATGCTCATGTTAGATACCAATGTATTGATAACTTGGGTTATGAATAAAGTGGTCAAGGACTTGTAAAAATTGTGAATGGTGACTGCAGCATCTATAGATTCAGTTATGTGGCCAAACCTTTCTTTTCTTAATATGTAATTGAGTAAACCCACAAATTTGTCCATTAGTCATTTTCTGGAATTAACATGTTCATTACTTAAGGACCACCATGGCCAAAATTTATTAATTCTTTAGGAGCAACGAGTGAATATTATATTACAAGAACTAATATATCCACCTTACAAACTAAAAAATATGTGAGTGA 1527 0.4119 QQLKVLLVKSYYPRKLEIRDREEMGKGGMSIDEHGEGKEENMAAWLVGINTLKIQPFNLPTLGPHDVRVRMKAVGICGSDVHYLKTLRCAHFIVKEPMVIGHECAGIIEEVGSQVRSLVPGDRVAIEPGISCWRCNHCKQGRYNLCDDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPKTVIVDVDDHRLSVAKSLGADDIVKVSTNIQDVAEEVVQIQKVMGAGIDITFDCAGFDKTMSTALSATKPGGKVCLVGMGHSEMTVPLTPAAAREVDVVGVFRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01233 387 SMART PKS_ER_names_mod 48 385 IPR020843 GO:0016491
Pste9g01233 387 Pfam Alcohol dehydrogenase GroES-like domain 64 175 IPR013154 -
Pste9g01233 387 PANTHER SORBITOL DEHYDROGENASE 40 387 - -
Pste9g01233 387 CDD sorbitol_DH 43 386 IPR045306 GO:0016616
Pste9g01233 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 101 115 IPR002328 GO:0008270|GO:0016491
Pste9g01233 387 Gene3D - 192 332 - -
Pste9g01233 387 SUPERFAMILY GroES-like 41 213 IPR011032 -
Pste9g01233 387 Pfam Zinc-binding dehydrogenase 215 345 IPR013149 -
Pste9g01233 387 Gene3D - 52 373 - -
Pste9g01233 387 FunFam Sorbitol dehydrogenase 192 332 - -
Pste9g01233 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 178 351 IPR036291 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01233 54 320 Monolignol Biosynthesis Gene Families AT4G37980 26.978 1.04e-17 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01233 9 10439192 10443636 Pste9g01233 9 10439192 10443636 ECH