Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01226 AAATGAAAAAAATAATTAAAAGGATAAATAACAGAATCCATCAGTGCCTAAACTGTGTTTCTTATTCTCCACATGACTGTTTCTTGTGCGTACACACAACAATGGTCTCTGCAACACTTTCTCACTCTCCTCTTCTCCATTCTCCTCTTTCAACCAAAATTACTCAACTACCCCTCTCCCTCTCTTTCTCCCTCTCAACCCCAACTCTTCTCACGCACCCTCTCCACTCGCGCTTCCTCCTCCCTAAGCCACGCGCCTACGTCGCTGCGCCCGCGCCCGACCCCAATTTCGCCGACCCGGATCCGAAACTGGATGGGCTGGGCCCGGAGAACGCGAAGGCCCAACACGTGATCACGTGGAGCCTCCTATTATCGCTTCTAATGAAGCACAAACTGCGTCTGGGTCTCGCGGTCGCAACGCTCCTCGCATGCTCCACCTGTACCCTATCCATGCCCATCTTTTCCGGACGGTTTTTTGAAGTTCTAATTGGCGCTAGACCTGAGCCGTTATGGAAGCTGCTTAGTAAAATTGGAGTTCTGTATGCCCTGGAGCCACTTTTTACCATTATTTTTGTTATAAACATGAACATAGTATGGGAGAAAATTATGTCAACACTAAGGGCTCAGATCTTTGGAAGAATATTGATTCAAAAGATTGAATTTTTTGACAAATACAAGGTCATTGGAACAATATTCATACTTTTTTCTTTATCACCACAACTAGCACCTATTCTAGGTGTTCTGATGCTTGCGGTTTCCATTTCAATCGCTGTCTACAAGAGATCTACTTTGCCAGTTTTTAAAGCACATGGGAAGGCCCAAGCATCTATATCTGATTGTGTAACAGAAACATTTTCTGCTATTCGAACAGTAAGATCCTTTGGTGGTGAAAAGTGCCAAATGTTCACATTTGCTAATCAGGTTCTATCTTTCCAATCAAGTGGGATAAAGCTTGGAACTTTCAAATCTGTAAATGAATCCTTGACTAGAGTTGCTGTTTATATTTCTTTAATAGCATTATATTGCCTTGGAGGTAGCAAGGTTAAGGCGGGTGAGCTCTCTGTTGGAACCATGGCATCTTTTATTGGATATACTTTCACTTTAACATTTGCTGTTCAAGGACTAGTTAATACTTTCGGAGATCTTCGAGGAACTTTTGCTGCTGTGGAGAGGATCAACTCTGTTTTGTCTGGAGTTCAAGTTGATGATGCCCTAGCCTATGGCTTAGAAAGAGAACTGAAACAAAAAACACTGGATGATGAAAACTATAAATTGGTCTTATCTAATATTTCTACGGAGAATAGCCAAAAAAATTATTTGCATTACATGTCAGCTCTTAAAACATCAAGCAATTTGTTTAGTTTAGCACAATCTGGAGATATTTGTCTTGAAGATGTATATTTCTCTTATCCTTTAAGGCCAGACGTGGAAATCTTGCGTGGTTTAAATTTAAGACTAAAATGTGGAACTGTAACTGCACTGGTGGGTCCTAGTGGTGCGGGCAAAAGTACAGTAGTACAGCTATTGTCTCGTTTTTATGAGCCAACTAGTGGTTGTATAACAGTTGCAGGAGAGGATGTCCGAACATTTGATAAGCGTGAATGGGCCAGAGTTGTCTCTATTGTAAATCAAGAGCCTGTGCTGTTTTCGGTGTCTGTTGGAGAAAATATTGCATATGGGCTTCCTGATGAAGATGTTTCTAAAGAAGATGTGATTAAGGCAGCAAAAGCTGCAAATGCTCATGATTTTATAATTGCACTTCCACAGGGCTATGATACACTTGTTGGTGAGCGTGGGGGCCTACTGAGTGGAGGACAGAGACAGAGAATTGCCATTGCCCGGGCTCTCCTAAAGAATGCTCCCATCCTTATACTTGATGAGGCTACCAGTGCACTGGATGCTGTCAGTGAGCGCTTGGTCCAGGATGCTCTCAACCATTTGATGAAGGGAAGGACTACATTAGTAATAGCTCACCGATTAAGCACAGTCCAAAATGCATATCAAATTGCAGTCTGTTCTGAGGGGAGGATTGCAGAACTAGGCACACATTTTGAGCTATTGGCTAAGAAGGGCCAATATGCTTCACTGGTTGGCACTCAAAGGCTTGCATTTGAATAGATTAATATTATGAAAATGTGAATATTTTCTGTTGTACCAAATAGAAATGCCCTATCAACTAGAGAAAAATAGCAGCATGATACATAAAGCTGGATAATTTGCTGCCTGGCACAAAAGGGGATATTGGGAGAGTGGAAAAGAAATGTTATAATCAATGGATGATTGAGTGGTCACTTAGATGATATTTTTGACAGATACTACCTGTTTTGACCAGATACAACAAGTATA 2345 0.4158 MKKIIKRINNRIHQCLNCVSYSPHDCFLCVHTTMVSATLSHSPLLHSPLSTKITQLPLSLSFSLSTPTLLTHPLHSRFLLPKPRAYVAAPAPDPNFADPDPKLDGLGPENAKAQHVITWSLLLSLLMKHKLRLGLAVATLLACSTCTLSMPIFSGRFFEVLIGARPEPLWKLLSKIGVLYALEPLFTIIFVINMNIVWEKIMSTLRAQIFGRILIQKIEFFDKYKVIGTIFILFSLSPQLAPILGVLMLAVSISIAVYKRSTLPVFKAHGKAQASISDCVTETFSAIRTVRSFGGEKCQMFTFANQVLSFQSSGIKLGTFKSVNESLTRVAVYISLIALYCLGGSKVKAGELSVGTMASFIGYTFTLTFAVQGLVNTFGDLRGTFAAVERINSVLSGVQVDDALAYGLERELKQKTLDDENYKLVLSNISTENSQKNYLHYMSALKTSSNLFSLAQSGDICLEDVYFSYPLRPDVEILRGLNLRLKCGTVTALVGPSGAGKSTVVQLLSRFYEPTSGCITVAGEDVRTFDKREWARVVSIVNQEPVLFSVSVGENIAYGLPDEDVSKEDVIKAAKAANAHDFIIALPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAYQIAVCSEGRIAELGTHFELLAKKGQYASLVGTQRLAFE 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01226 704 Gene3D ABC transporter type 1, transmembrane domain 108 225 IPR036640 GO:0005524|GO:0016020
Pste9g01226 704 Gene3D ABC transporter type 1, transmembrane domain 226 399 IPR036640 GO:0005524|GO:0016020
Pste9g01226 704 SMART AAA_5 487 661 IPR003593 GO:0016887
Pste9g01226 704 CDD ABC_MTABC3_MDL1_MDL2 460 699 - -
Pste9g01226 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 460 698 IPR003439 GO:0005524
Pste9g01226 704 FunFam ATP-binding cassette sub-family B member 8, mitochondrial 458 702 - -
Pste9g01226 704 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 98 226 IPR039421 -
Pste9g01226 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 452 699 IPR027417 -
Pste9g01226 704 Pfam ABC transporter transmembrane region 226 370 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01226 704 Pfam ABC transporter transmembrane region 135 225 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01226 704 Gene3D - 458 701 IPR027417 -
Pste9g01226 704 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 135 383 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01226 704 SUPERFAMILY ABC transporter transmembrane region 122 396 IPR036640 GO:0005524|GO:0016020
Pste9g01226 704 Pfam ABC transporter 478 629 IPR003439 GO:0005524
Pste9g01226 704 ProSitePatterns ABC transporters family signature. 601 615 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01226 Pste-Chr9 10384757 10391919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01226 457 704 Calmodulin-binding Proteins AT2G36910 54.400 1.03e-75 263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01226 9 10384757 10391919 Pste9g01226 9 10384757 10391919 ECH