Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01220 ATTAAAATTCGAGGTTTTATTTTTGGTACCATTGCGCTGTCTGTAGGAGCAAAGTTTGTAGCATTAAGAAAACCAAGAAAGTTGCCGTTATGGCTGTGGACTTGTGGAATGCTGGGGTCAGAGATTTCTGAGACATGTTCTAACAGGCTTTTGGTGAATTGGGTCACTGTGGTTTCTGTCATGGGTAGTAGAGAATCTGAGCCTCTTGGGTCTTTTGTTCACCGATTTCGCTTGGTTTACGATAGACTCACACTTGTATCAAGAAAAATACTCATCCAACAGCACGTAGCTAGATTCACTTTACCTTACAAACTCTCCTTTGACAAACGTTATCCAGAAACAAACATGAACAGCACGACCACACTCTGTTGTTTCAAACACTGCGTTCCTTCCCCAATGCTATACCCCAAAACCACCTTCACAAAATTTCCACTAACAATACCTCGTTCCAGTCTTAAAGATTCTCAGCCACCAAATTCAACCCAGCAACAGCAACAAGTCAACCTCTCCGTTCTTCGTTTCACATTGGGGATACCGGGGTTAGATGAGTCCTACTTGCCCAGATGGATTGGTTATGGCTTCGGTTCACTTCTCCTCTTGAATCAATTTCTTGGGTCTGATTCAGCCACTGTTACACCAGCTCAGCTTAGTACAGAGGTTTTGGGCCTGTCTTTGGCTTCCTTCTCAATTCTTCTGCCTTACCTTGGTAAATTTCTTAAGGGTGCTCAACCAGTGGATGAAAAGACGATACCAGATGGTACTGAGCAAATATTTATCATGTCAACGGAAATAATGAATAGTCTGAAGGAGGACTTGGCTTGGGCATCATATGTTCTGTTGCGTAATACAAATGCCATAGCTATGGTCACCAGTTATCATGTCATATATAGGTGGCAATTTGGTCTCTTTTTTTCTGCTGCTAAGCATTTCTTCTTCTACCTTATTCTTGCACGATTTCAATTTGTTCAGCTATTTTTTATTCAAGGAAAAATATGCGCAAGGGGATACTGGAACATACCAGATGATACATCAAAAGAAATTCTTCCTGGTTGGTTTAAGAAAAAAATTGAAAATGCTGGCCTGTATGATTTGAAAGACACCCTATATTTTCCTCAAGATGCAGCCTCAACTTCAAGATATGCATTTAGCAATAAAGACAGAGCCTGGATTGCAACTGTGGCAAACAAATTTAGAGGAAGGGTCTAGCCATCTGATTACCTGAGGTAATGCAAGAGTATCTGGAGTATAAACAGAATGAAGCATGGAATCTATGTTATGCAGAGGAATGGAAGGCATAGGATTTAACAGCTGAAAATTAGGGTTTTCTTGGTCAAATTAAGGGCAGAAATTCAGAAATTGAAGACTCGTGGAATAGGTGAGGGCAAGGCTGATTCACTAGCATTAGGATGAGGATCGGAGGTCAGCCAGTGGCATTTTTGTCTGTGAATGATTATTTTGTATAAACAAAGTGGGTGCATTGATTCAATTTGAATCGATAGATGTGTCTCAAATAGAACAATTAACATTCTTCTTTGAAACTATATCATAGCTTGGTCACCAACTTGTTTTGACGTACATCCTTTACATGGCTTGACAAGATTTCTGGGATGTATATAAGTTGGTCTTCCTTTTGCTGTTACCTAAATGATTTGAGAGATTCAGGTTAGC 1668 0.4005 IKIRGFIFGTIALSVGAKFVALRKPRKLPLWLWTCGMLGSEISETCSNRLLVNWVTVVSVMGSRESEPLGSFVHRFRLVYDRLTLVSRKILIQQHVARFTLPYKLSFDKRYPETNMNSTTTLCCFKHCVPSPMLYPKTTFTKFPLTIPRSSLKDSQPPNSTQQQQQVNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNQFLGSDSATVTPAQLSTEVLGLSLASFSILLPYLGKFLKGAQPVDEKTIPDGTEQIFIMSTEIMNSLKEDLAWASYVLLRNTNAIAMVTSYHVIYRWQFGLFFSAAKHFFFYLILARFQFVQLFFIQGKICARGYWNIPDDTSKEILPGWFKKKIENAGLYDLKDTLYFPQDAASTSRYAFSNKDRAWIATVANKFRGRV 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01220 401 Pfam Cofactor assembly of complex C subunit B, CCB2/CCB4 186 304 IPR021325 -
Pste9g01220 401 PANTHER PROTEIN COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, CHLOROPLASTIC 324 376 IPR044970 GO:0010190
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01220 Pste-Chr9 10162935 10167345 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01220 1 29 PRT Gene Family AT4G12440 73.333 1.50e-07 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01220 9 10162935 10167345 Pste9g01220 9 10162935 10167345 ECH