Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01213 TTTCACTCTTATCTTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTCACCAATGCCTTGAATTCCCCTCATGGGCTTTCTCCGACGACTCTTCGGAGCCAAAAAGCAACCCAAGTCAGACGCGACCAAAGACAAGAAAACATGGAGCTTCGTAAAGCACAGTACGAGGTACAAGCCCAACACATTACCACCAACACTTAACAACACTGCCTTTCACCCGTCCACTTCCTCAGACTCCGTCGACGCCAACAAGCATGCCATCGCCGTCGCCGCCGCCACCGCCGCCGTCGCCGAGGCCGCTCTCGCTGCCGCCCATGCAGCGGCAGAAGTTGTCAGGCTCACCAGCTCCACCGCCACCAGGCCCACCGCGCCTCCCCAGCCCCGGAGGCCGCCGGAGGAAACCGTTGCCGCCTTAAAAATCCAGTCCGCGTTTCGGGGTTACTTGGCAAGGAGGGCATTGAGAGCACTTAAGGCATTGGTGAAGTTGCAAGCATTGGTGAGGGGGCACATTGTGAGAAAGCAAACTGCTGATATGCTCAGGCGCATGCAAACTTTGGTGAGACTTCAGTCCCGGGCACGTGCAACTCGTGGGAGCTTGTCAGATAATATGCATTCTTTCAAGTCTTCACTTTCCCATTACCCTGTCCCTGAAGATTATCAGCACCCACTTCGCGCCTATAGTACCAAATTTGATGGATCTATTCTCAAGAGATGTAGTTCAAATGCAAATTTTAGGGACATTGACTTGGAGAAAGCACGGTTTGGTTCCCATTGGTTGGACAGTTGGATGGAAGAAAATTCTTGGAGTCAAACTAGAGACGCTTCGTTGAAAAATGGGCACCATGATGATGATAAGAGTGATAAGATTCTTGAAGTAGATACTTGGAAGCCACACTTGAACTCACACCATAGTAGTAGCTCATTTCAGCCAGCACATCGTTACTTGTCTTCTGATTACAACAACGAGAACTTTGTGGCATATGAATCCCCATCAAAACGTTCTTCCAAAGCTCTAAACCCAAGTCTCTCTTCTAGGGAGGTTCTACCCCTTGGCTCTTTGAAATTTTACAAAGGAAAAGAAGAGGCCCCTTTGAGAAATGTTGAAGATAGTCCTCAAGCATTTTCTGCCTCCTCTAGGCTTGGAAGTGGGGCTAGGAGAGGTCCATTTACGCCAACTAAGAGTGAGTGTGCATGGAGTTTCTTCAGTGGCTACTCGGGTCATCCCAATTACATGGCAAATACAGAATCTTCTAGAGCCAAGGTTAGGTCACATAGTGCTCCAAGGCAAAGAATGGAGTTTGAGAGATATGGTTCCACAAGAAGGTCTCTTCAGGGTCTTTGGGAAATAGGGCCTAGCTCAGATAGGGATTCTGATTTTAGGAGCAAAGCAAGCACAAGCAGCACTTTGAACAGAATTGGGAGTGCCCATTTAAGGTGACATAACAAGTTTTGTGAATTAAGACCATTGGAGTCTCCTCTTTTCCTAAAAAAAGAAATAAAAAAAAAATAGAAAAGAGTCGTTAGTTTCTTTTGCTAAGCTTTTATATGTATCACGGCAGTTTTAGGATGTAAGTATTTGACATGTACTCCTACAGTCTTTGTCCCCACACGATCAACGGCCACCTTGTTGACTCATGATTGGGTTTTACTGAATTTTGTTATGTTGCAG 1672 0.4695 MGFLRRLFGAKKQPKSDATKDKKTWSFVKHSTRYKPNTLPPTLNNTAFHPSTSSDSVDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSTATRPTAPPQPRRPPEETVAALKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQSRARATRGSLSDNMHSFKSSLSHYPVPEDYQHPLRAYSTKFDGSILKRCSSNANFRDIDLEKARFGSHWLDSWMEENSWSQTRDASLKNGHHDDDKSDKILEVDTWKPHLNSHHSSSSFQPAHRYLSSDYNNENFVAYESPSKRSSKALNPSLSSREVLPLGSLKFYKGKEEAPLRNVEDSPQAFSASSRLGSGARRGPFTPTKSECAWSFFSGYSGHPNYMANTESSRAKVRSHSAPRQRMEFERYGSTRRSLQGLWEIGPSSDRDSDFRSKASTSSTLNRIGSAHLR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01213 455 MobiDBLite consensus disorder prediction 439 455 - -
Pste9g01213 455 MobiDBLite consensus disorder prediction 341 366 - -
Pste9g01213 455 MobiDBLite consensus disorder prediction 425 455 - -
Pste9g01213 455 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Pste9g01213 455 MobiDBLite consensus disorder prediction 1 22 - -
Pste9g01213 455 Pfam IQ calmodulin-binding motif 112 131 IPR000048 GO:0005515
Pste9g01213 455 Pfam IQ calmodulin-binding motif 134 151 IPR000048 GO:0005515
Pste9g01213 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 155 IPR027417 -
Pste9g01213 455 Gene3D - 109 162 - -
Pste9g01213 455 PANTHER IQ-DOMAIN 5-RELATED 19 429 - -
Pste9g01213 455 MobiDBLite consensus disorder prediction 91 110 - -
Pste9g01213 455 SMART iq_5 109 131 IPR000048 GO:0005515
Pste9g01213 455 SMART iq_5 132 153 IPR000048 GO:0005515
Pste9g01213 455 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Pste9g01213 455 Pfam Protein of unknown function (DUF4005) 347 420 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01213 Pste-Chr9 9996093 10001506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01213 1 424 IQD Protein Family AT5G62070 46.980 7.98e-67 218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01213 9 9996093 10001506 Pste9g01213 9 9996093 10001506 ECH
Pste9g01213 9 9996093 10001506 Pste4g01868 4 13875174 13880687 PCT