Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01211 ATGACAAGGCAATCTAGAATCCAGGTCAAAAAGTTGAGCGAGGAATCCTCCACTAAAAAGCAAAGGAAAATGGAAGGCCATGGTGAGATGGGTTTAATTGGTGACAGTTTTGATACTAGTAATTTGCTGGGGAGGCTGAGAGATGACGAGTATGAAAGCCGGTCTGGTAGTGATAATTTTGATGGCGGATCTGGTGATGAACAAGATGGTGGGGATGATCAACCACAGAAAAAGAAGAAGAAATACCATAGACACACTCCTCAACAAATTCAGGAGCTTGAAGCGTTTTTCAAGGAGTGTCCTCATCCTGATGAGAAGCAAAGAACAGATCTTAGTAAGAGACTTGGCTTGGAGAATAAGCAAGTCAAGTTCTGGTTTCAGAATCGACGAACCCAAATGAAGACACAACTGGAACGCCATGAGAACATGATTCTTAGGCAGGAAAATGACAAGCTCCGAGCTGAGAACAGTGTAATGAAGGAAGCTTTGGCAAATCCAATATGTAACAACTGTGGTGGCCCAGCCATTCCTGGTCAAATTTCACTGGAGGAGCACCAAACTAGAATTGAAAATGCTCGACTGAAGGATGAACTGAACCGCATATGTGCAATATCAAACAAGTTCCTGGGTCGGCCCCTCTCATCACTAGCCAGTCCCATGCCTCTGCCATCCTCAAATACTGGGCTAGAGCTTGCTATTGGACGAAATGGACTTGGTGGTCCAAGCAATTTTGGCATGCCCTTGCCCATGGGATTTGATGTGGGAGATGGAGTTTTGGGCTCCTCACCTGGGATGTCTAATTTAGGTGCTAGGTCACCAATGGGAATGATTGGAAACGAAGTCCAGTTTGAGAGATCTATGCTTATAGATATTGCAGTAAATGCTATGGAGGAATTAGTTAAGATGGTTCAGCCTGATAGCCCTATTTGGATTAAAAGTTCTGATGGAAGGAATGAAGTACTTAACCATGAGGAGTATGCAGTAATGTTTTCTCCTTATATTGCATCAAAACCAGCTGGTTATGTAACTGAAGCAACGAGAGCTACTGGAGTAGTATTAGCCAGCAGTTTGGGCCTTGTGGAAACAATGATGGATCCGGATCGATGGTCGGAGGTTTTTGCTTCTGTGGTTGCTAGTGCTGCCACTCTGGATGTACTATCTAGTGGCACAGGTGGAACAAGAAATGGAGCTTTGCAATTGATGTTTGCTGAGGTTCAATTGCTTTCTCCATTAGTCGCTGCTCGTCAATTGAGTTTCCTCAGGTTTTGCAAACAGCATGCTGAAGGTGTATGGGCTGTGGTTGATGTTTCGGTTGATATTGTTCGCAATGCAACCAATTCATACCCATTAATGAGCTGCAGGAGGCTTCCTTCTGGCTGTCTTATTCAGGAAATGCCCAATGGTTTCTCCAAGATTACTTGGGTTGAACAATCCCAATATGATGAGAGTGTGATCCACCAACTTTATCGTCCATTGGTTAGTTCTGGCCTTGGTTTTGGTGCTCAGAGATGGATTGCCACCCTCCTAAGGCAGTGTGAGTGCTTGGCTATCCTCATGTCCTCTCCTAGCCCGTCCAATGATCCCTCAGTCATTGGGCCAGCGGGTAGGAAAAGCATGCTGAAGCTTGCACAGCGCATGACCGATTGCTTCTGCTCAGGGATCTGTGCTTCGTCTGCTCGCAAGTGGGAAATACTGCCCGTTGGTAATCTGGCTGATGATATAAGAATCATGGTCCGGAAAATTATGGATGACCCCAGTGAGGGTCCTGGCGTTGTGCTGAGTGCTTCAACTTCTGTTTGGATGTCAGTGTCACGACAAAGGTTGTTTGACTTTCTGCGTGATGAAAATTTGAGAGGCGAGTGGGACTTGCTGTCCAAAGGTGGGCAGATGAAAGAGATGCTCCGTGTTCCTAAAGGACAAGAACCTGGAAATTATGTTTCTATCCTTCATTCTGCTTCCAACAGCGATGCGCTATTTCTGCAAGAGTCATGGACTGATGCCTCCGGCTCGATGGTAGTGTATTCTCCGATCAACATGCAAACCTTGAATATAGTGATGAACTGTGGAGATTTATCGTATGTCGCCCTCCGTCCTTCTGGCTTTGCTATTTTGCCAGATGGTGCTTCAAACAACGGTGATGGAAGTGAGGGTAGTGGCAGCTGCCTGCTAACAGTTGGCTTACAAATGCTGCAGAATGGCAACCAAACAACCAAGTTCACAATGGAGTCAGTTGAAACTGTTAATACCCTCTTGTCATTGACCATTCAGAAGGTCAAAGATGCACTAGGAGTTGCATGA 2298 0.4556 MTRQSRIQVKKLSEESSTKKQRKMEGHGEMGLIGDSFDTSNLLGRLRDDEYESRSGSDNFDGGSGDEQDGGDDQPQKKKKKYHRHTPQQIQELEAFFKECPHPDEKQRTDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENMILRQENDKLRAENSVMKEALANPICNNCGGPAIPGQISLEEHQTRIENARLKDELNRICAISNKFLGRPLSSLASPMPLPSSNTGLELAIGRNGLGGPSNFGMPLPMGFDVGDGVLGSSPGMSNLGARSPMGMIGNEVQFERSMLIDIAVNAMEELVKMVQPDSPIWIKSSDGRNEVLNHEEYAVMFSPYIASKPAGYVTEATRATGVVLASSLGLVETMMDPDRWSEVFASVVASAATLDVLSSGTGGTRNGALQLMFAEVQLLSPLVAARQLSFLRFCKQHAEGVWAVVDVSVDIVRNATNSYPLMSCRRLPSGCLIQEMPNGFSKITWVEQSQYDESVIHQLYRPLVSSGLGFGAQRWIATLLRQCECLAILMSSPSPSNDPSVIGPAGRKSMLKLAQRMTDCFCSGICASSARKWEILPVGNLADDIRIMVRKIMDDPSEGPGVVLSASTSVWMSVSRQRLFDFLRDENLRGEWDLLSKGGQMKEMLRVPKGQEPGNYVSILHSASNSDALFLQESWTDASGSMVVYSPINMQTLNIVMNCGDLSYVALRPSGFAILPDGASNNGDGSEGSGSCLLTVGLQMLQNGNQTTKFTMESVETVNTLLSLTIQKVKDALGVA 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01211 765 SUPERFAMILY Homeodomain-like 60 136 IPR009057 -
Pste9g01211 765 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 74 762 IPR042160 -
Pste9g01211 765 MobiDBLite consensus disorder prediction 1 86 - -
Pste9g01211 765 FunFam Homeobox-leucine zipper protein HDG1 64 152 - -
Pste9g01211 765 SUPERFAMILY Bet v1-like 542 734 - -
Pste9g01211 765 Pfam Homeodomain 79 134 IPR001356 GO:0003677
Pste9g01211 765 SUPERFAMILY Bet v1-like 283 514 - -
Pste9g01211 765 CDD homeodomain 83 136 IPR001356 GO:0003677
Pste9g01211 765 ProSiteProfiles 'Homeobox' domain profile. 76 136 IPR001356 GO:0003677
Pste9g01211 765 ProSiteProfiles START domain profile. 281 517 IPR002913 GO:0008289
Pste9g01211 765 Pfam START domain 291 514 IPR002913 GO:0008289
Pste9g01211 765 MobiDBLite consensus disorder prediction 42 56 - -
Pste9g01211 765 SMART START_1 290 514 IPR002913 GO:0008289
Pste9g01211 765 ProSitePatterns 'Homeobox' domain signature. 111 134 IPR017970 GO:0000981|GO:0006355
Pste9g01211 765 CDD START_ArGLABRA2_like 285 513 - -
Pste9g01211 765 SMART HOX_1 78 140 IPR001356 GO:0003677
Pste9g01211 765 Gene3D - 289 500 IPR023393 -
Pste9g01211 765 Gene3D - 66 152 - -
Pste9g01211 765 MobiDBLite consensus disorder prediction 8 29 - -
Pste9g01211 765 Coils Coil 130 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01211 Pste-Chr9 9948405 9955454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01211 24 762 Homeobox Transcription Factor Family AT3G61150 53.543 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste9g01211 START 2.3e-44 CL0209