LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste9g01207	ATGGCTCCGCTGCCGCCGGTGGAACACAACGCTGAATCCACCACCTCCCCACCCCTGCCGCCGACTCTCAGAGATCCATTCCCACGCCCTTTCTCACCAAAACCTATCAACTCGTCGACGACCAATCCATCGACGACGTTATTTCATGGAACGACGACGGATCAACGTTCATCGTTTGGAACCCTACCGTCTTCGCCAGAGACTTGCTTCCTAAATATTTTAAACACAACAATTTCTCCAGCTTCGTTCGCCAACTCAACACTTACGTCCGGATTTAGAAAAGTTGTACCTGATCGGTGGGAGTTCTCTAACGAGTGTTTCCGCCGCGGCGAAAAGCGTCTTCTGTGCGAGATTCAGCGGCGGAAGATCTCTTTGCCGGCGCCGTCTCCTACAACCACGGCGACCGCGACGGTTGCTGTTCCGGCGCCGATGCCGTTGACTGCTATACCGATCATATCGCCGTCGAACTCCGGCGAGGAGCAGGAAAGAGAACGTTCAGCTAACGAAAGAGCTCGCAGAGATGAGATCGCTCTGCAACAATATATACACTCTCATGTCAAATTACGCGAACGCGAGCGGCAGCGGAGTAGTAACGGTAACGGAAGTTACCAAACGGATGGAGGTGCCGGTGGCGCGCAGGGAAGTAGGGAGTCCGGCATGACGGCGGTGAAGCCGCTGGATTTGATGCCGGTGAAGCGGAACTCCGGTGAGGACGCGGCGGATGGGATGGCGGAGATGAATCCGAAGCTGTTCGGTGTGGCGATTGGAGCGAAGCGTGCGAGGGAGGGGGGAGGGAGTGGTGGTGGAGATTCAGGGGAAGGATTTGGAGGAGGGGAGGAAGATACACTGCTTCGCCTGCATAACCCGGGTTCTGCGGACGTGAAATCAGAGCCGTTGGATTGTCAGAACCATCGCGAGAATCAGGAAACGCCGTGGTTGAGTCAGTTTCACAGGACAAATCAGAGGGTGTGTAACTGA	978	0.5562	MAPLPPVEHNAESTTSPPLPPTLRDPFPRPFSPKPINSSTTNPSTTLFHGTTTDQRSSFGTLPSSPETCFLNILNTTISPASFANSTLTSGFRKVVPDRWEFSNECFRRGEKRLLCEIQRRKISLPAPSPTTTATATVAVPAPMPLTAIPIISPSNSGEEQERERSANERARRDEIALQQYIHSHVKLRERERQRSSNGNGSYQTDGGAGGAQGSRESGMTAVKPLDLMPVKRNSGEDAADGMAEMNPKLFGVAIGAKRAREGGGSGGGDSGEGFGGGEEDTLLRLHNPGSADVKSEPLDCQNHRENQETPWLSQFHRTNQRVCN	325

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste9g01207	325	SMART	hsfneu3	39	121	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
	Pste9g01207	325	MobiDBLite	consensus disorder prediction	19	33	-	-
	Pste9g01207	325	MobiDBLite	consensus disorder prediction	34	62	-	-
	Pste9g01207	325	MobiDBLite	consensus disorder prediction	261	283	-	-
	Pste9g01207	325	MobiDBLite	consensus disorder prediction	158	196	-	-
	Pste9g01207	325	PANTHER	HEAT SHOCK TRANSCRIPTION FACTOR	82	198	IPR027725	-
	Pste9g01207	325	MobiDBLite	consensus disorder prediction	197	211	-	-
	Pste9g01207	325	MobiDBLite	consensus disorder prediction	1	62	-	-
	Pste9g01207	325	MobiDBLite	consensus disorder prediction	150	227	-	-

Showing 1 to 9 of 9 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste9g01207	Pste-Chr9	9886016	9887149	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste9g01207	81	325	HSF	AT5G62020	33.088	3.05e-30	114

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste9g01207	9	9886016	9887149	Pste9g01207	9	9886016	9887149	ECH
	Pste9g01207	9	9886016	9887149	Pste4g01887	4	14031582	14032929	PCT

Showing 1 to 2 of 2 entries