Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01200 CTGAGACATCACTCCTCTCTCTTTCTCTCTCAGTCAGTTGCTTTGGTTGCCTGGTGATTGAATCTCCTCTTGTATTCTAAGGTTGCCCTTTCCCTGTCATTGTGCTGTGGAAAGCTGGGTGCAGACTGTGCACCTAAACACATGGGAAGCATTTCTCTATGGAACAGTGCTAAAAAAATCATCACTGCTGCAGTCATCACTGTGGCTGTGAGTGATCGTATTGTGACTGTTGTTCCAGTTCGCGGTGGTTCTATGTCTCCCACATTTAATCCTAAAACTGGCTCTTGGATGGAAGAAACTTTTGATGACCACGTTTTGGTTGAGAAATTTTGCCTCGGGAACTACAAGTTTTCACGTGGCGATGTTGTTGTCTTCCGTTCCCCACTGAATCACAAAGAGACAATGATAAAGAGAATAGCTGGATTACCTGGTGAATGGATAGGAACGGAACATAACAATGATGTGATTCAGATTCCATCAGGACATTGTTGGGTTGAAGGAGACAACACAGCTTCTAGCATGGATTCAAAGTCATTTGGACCAATTCCTTTAGCCCTAATTCGAGGAAGGGTTACCCATATTCTGTGGCCTCCTCAAAGAAGAGGATCTGTCAAGAGAACTCCACAACAAGGATTATCTTCTAATCAGTTGGATCCCAATTAGTGGAATAAGGCTATTGTTGCTGTATAGTTGGATCCGAACTCTATTTTTTAGCCTCCTCAAAAAATAGGTGTGAAAGAACTACACCAGAAGTGTTATCTTCTGATCTTAGACCCTTAGATGCATTCTTTACTTAATTTGTGTTAGTGGAAAAGAGAATCACCTATTTAGTGATTGGACTATTAGTATAAACCTTGAATTCCTCAAGTATTGATTAGATTATAATTTCTAAGCAAGGTAACCTAAAAGGTTACTAATAAGATATTTTAATTGCTCCTTTGAAGCAGAAA 950 0.4021 MGSISLWNSAKKIITAAVITVAVSDRIVTVVPVRGGSMSPTFNPKTGSWMEETFDDHVLVEKFCLGNYKFSRGDVVVFRSPLNHKETMIKRIAGLPGEWIGTEHNNDVIQIPSGHCWVEGDNTASSMDSKSFGPIPLALIRGRVTHILWPPQRRGSVKRTPQQGLSSNQLDPN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01200 173 MobiDBLite consensus disorder prediction 151 173 - -
Pste9g01200 173 SUPERFAMILY LexA/Signal peptidase 28 157 IPR036286 -
Pste9g01200 173 PRINTS Bacterial leader peptidase 1 (S26A) family signature 26 42 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste9g01200 173 PRINTS Bacterial leader peptidase 1 (S26A) family signature 111 130 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste9g01200 173 PRINTS Bacterial leader peptidase 1 (S26A) family signature 88 100 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste9g01200 173 NCBIfam signal peptidase I 13 105 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste9g01200 173 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 5 162 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Pste9g01200 173 Gene3D Umud Fragment, subunit A 23 163 - -
Pste9g01200 173 Pfam Signal peptidase, peptidase S26 8 103 IPR019533 GO:0004252|GO:0006465
Pste9g01200 173 Pfam Signal peptidase, peptidase S26 107 149 IPR019533 GO:0004252|GO:0006465
Pste9g01200 173 CDD S26_SPase_I 30 144 IPR019533 GO:0004252|GO:0006465
Pste9g01200 173 MobiDBLite consensus disorder prediction 156 173 - -
Pste9g01200 173 FunFam Mitochondrial inner membrane protease subunit 24 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01200 Pste-Chr9 9768778 9771552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01200 38 161 MADS-box Gene Family AT1G29960 37.692 1.69e-20 80.5