Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01174 GCTGAACCCTTTACCACTTGACGTGCACACAATCCACTCTTCCTAGATACCACCGCCACCCACCTTCCTATAAATACTTCACACAATTCACAATTCACCATTCACCACATAAGACTATGGAAACCCCACTCACTCTCACCGCCCTCCTCCGCACCGTCGCCGGAATATTCCCCTCCCGCCGAGCCCTCTCCGTCCCCGCTAAATTCGACCTCACCCACTCCGCTCTCCTCCAATTGGTTGAATCCGCCGCCGCTCGCTTCGTCTCCGCCGGAATCAAACCCGGCGATGTCGTCGCCCTCACCTTCCTCAACACCCTCGAGTTCGTTGTCATGTTTCTAGCCGTTATTCGAGCGCGAGCCACTGCCGCGCCGTTAAACTCAGCTTACACAGCCGAAGAGTTCGAGTTTTACTTGTCCGACTCCGAGTCCAAACTGTTACTAACATCATCAGAAGGAAACGAGGCAGCTCAAGCCGCGGCTTCCAAGCTCAGCATTCCGCACGGCGCGGCTTCGATCACCCGAGCTGAGAACGAAGAAGCCGAGCTGAACCTGACATTGAAAAACTCCGAGTCGATTAACTCGGTCGAGTCTATTGAGTCACTCATGAACGATCCTGCTGACGTGGCGCTTTTCCTTCACACCTCCGGCACCACGAGCCGTCCCAAGGGAGTGCCTTTGACTCAACACAACTTGCTATCTTCAGTGAAGAACATTAAATCGGTGTACCGACTCACTGAGTCCGACTCCACGGTGATCGTGCTTCCTCTTTTCCACGTGCACGGTTTAATCGCGGGTTTGCTGAGTTCCCTCGGGGCGGGCGCAGCGGTGGCGCTGCCGGCGGCGGGGAGGTTCTCCGCCTCGTCGTTCTGGAAGGACATGGTGAAGTACAACGCCACGTGGTACACAGCGGTACCCACCATACACCAGATCATACTGGATCGCCACGCGAACAACCCTGAACCAGTTTACCCGCGGCTCCGGTTCATCAGAAGCTGCAGCGCGTCGCTGGCACCGGTTATTCTCGGTAAACTTGAGGAGGCTTTCGGTGCGCCGGTGTTGGAGGCTTATGCAATGACCGAAGCGTCGCATCTCATGGCTTCGAACCCTTTGCCGCAAGATGGGCCCCACAAGGCCGGTTCAGTTGGAAAACCCGTGGGTCAAGAAATGGCTATTTTGGACGAAACGGGTCGGGTTCAAGAGGCTGAAGTGAGTGGAGAAGTTTGCATTCGCGGACCCAACGTCACTAAGGGTTATAAAAACAACGAGGAAGCCAATACAGCAGCGTTCCAGTTTGGTTGGTTTCACACCGGTGATGTTGGTTACTTGGACTCTGATGGGTATTTGCATCTCGTGGGTCGGATCAAGGAGCTCATCAACCGTGGAGGAGAAAAGATATCACCAATAGAAGTGGATGCAGTCCTTCTTTCACACCCAGACATTGCTCAGGCAGTTGCTTTCGGAGTGCCTGATCCCAAGTATGGGGAGGAGATACATTGTGCTGTCATCTCAAGAGAAGGATCAGACGTTGACGAGGCAGAGGTGCTAAGGTATTGCAAGAAGAACCTTGCATCTTTCAAAGTCCCCAAAAAGGTCTTCATTACTGATTCTTTGCCCAAGACTGCCACTGGAAAGATTTTGCGTCGTCTTGTTGCAGAACACTTTGTCTCCCAAATTTGAGCATCTCATGTCCCCAGCTTTGGTGCGTACATACCTGCCCAATACGTAGATGGGATCAGCAGACCATAAAATTTTACAATAATCAGGCAGCTTGGCATTTAATTGAGCGGAGGGTATTTCTGCTAATGGTCTTTCATACAGGCTACAAATAGATTGTAGTTTTCATGATTCATGCGATTTGTTCACAATGTAATGTTTTCAATGTTTTATAGATATTAAATAACCTCTAATCCTTTTTTGTCTACATTTCTAACTTCATGGATCGTGAGCTGTCGGAAACTAAAAAATTCATCATCCAGATAACACTGTAAAAGCCTACAAATAAAACAGGCAAAGCAAAAAAGGTGAAGAAGTGTCCCTTAAGATTTAATTGGGTATGCTATTAGTATCAATCAGTACGAACACATATTGTTGCAAAGTGCAACAGACAGTTCCATTTGCAATTTGCAATCTACAATCTGCACTTGTTTAATTCAATAGTAAAATGGTTGAGCTAGAAATAGGCAGAATATAAGGAGAAAGAAATGCGCCATGCTTCTACCTTTTTACCATCA 2230 0.491 METPLTLTALLRTVAGIFPSRRALSVPAKFDLTHSALLQLVESAAARFVSAGIKPGDVVALTFLNTLEFVVMFLAVIRARATAAPLNSAYTAEEFEFYLSDSESKLLLTSSEGNEAAQAAASKLSIPHGAASITRAENEEAELNLTLKNSESINSVESIESLMNDPADVALFLHTSGTTSRPKGVPLTQHNLLSSVKNIKSVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGAGAAVALPAAGRFSASSFWKDMVKYNATWYTAVPTIHQIILDRHANNPEPVYPRLRFIRSCSASLAPVILGKLEEAFGAPVLEAYAMTEASHLMASNPLPQDGPHKAGSVGKPVGQEMAILDETGRVQEAEVSGEVCIRGPNVTKGYKNNEEANTAAFQFGWFHTGDVGYLDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDPKYGEEIHCAVISREGSDVDEAEVLRYCKKNLASFKVPKKVFITDSLPKTATGKILRRLVAEHFVSQI 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01174 519 SUPERFAMILY Acetyl-CoA synthetase-like 4 517 - -
Pste9g01174 519 Coils Coil 133 153 - -
Pste9g01174 519 FunFam Peroxisomal-coenzyme A synthetase 6 414 - -
Pste9g01174 519 ProSitePatterns Putative AMP-binding domain signature. 172 183 IPR020845 -
Pste9g01174 519 PANTHER ACYL-COA SYNTHETASE 7 516 - -
Pste9g01174 519 FunFam 4-coumarate--CoA ligase 2 417 518 - -
Pste9g01174 519 Gene3D - 415 517 IPR045851 -
Pste9g01174 519 Pfam AMP-binding enzyme 18 421 IPR000873 -
Pste9g01174 519 CDD FACL_fum10p_like 19 513 IPR045310 GO:0016874
Pste9g01174 519 Pfam AMP-binding enzyme C-terminal domain 430 505 IPR025110 -
Pste9g01174 519 Gene3D - 6 414 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01174 Pste-Chr9 9499054 9503419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01174 6 519 Monolignol Biosynthesis Gene Families AT4G05160 29.623 2.62e-56 195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01174 9 9499054 9503419 Pste4g02959 4 21073916 21077710 ECH
Pste9g01174 9 9499054 9503419 Pste9g01174 9 9499054 9503419 ECH
Pste9g01174 9 9499054 9503419 Pste4g02959 4 21073916 21077710 PCT