Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01160 ATGCCAATTGCAAAACTAAAAGCCTCTGGCACTCCAGATGTCATGAAAACAGAGGACAGGATTGATACCATAATAAGACAGGCGATAGGCAAAGAACCTTTTGTTTCTTTTCCAAGGGCCAGTGACAGCCCTGTACAGTGGATTCAATTACTCCACGCCTTAGATCCGCAAGGCGTTCAGCTGCAGAAGTGTGAAAAATGTTCACGAGAGTTTTGCTCCCCCATTAACTATAGAAGACATATTCGTGTACATCATCGGTTTAAAAAGCTTGATAAGGATTTTACAAAAACTAGGGATCTTTTAGGAGCATATTGGGATAAGCTATCTTTAGAAGAGGCCAAGGAAGTTGTATCATTCGAAAATGTGGTGCTGGAGGAAGTTTCGGGTTCGTCAATTTTAAAATCTCTGACAACTCTTATTCAAAACCAAGGATTTTATTCATTTCCTCAGTATTATCTGATGGCTGGTGCTGCCCTTTTGGATATTGTTCAATCAAAACCTTCCAGCTTTCCTATATCTTCCCAGGAGTTGTTCAGCGTCCTTGATGATGCTAGTGAAAAAACATGTTTATGTGGGACAGCAGAGTCAATGCAAAGATATGTATTTGATGGAGAGGCTGGAAAAATTGGTCTTGAACCAAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTTGAACAGAAATTGGTGAAGGCATGGCTTGCTGACAAGGATGCTGAAGCACTGAGGTGCCAGAAACAATTGGTGGAGGAGGAAGAAGCCGCTCAGAAACGACAAGCTGAGATTTTGGAGAGGAAACGCCAGAAGAAGCTTAGACAAAAAGAACAAAAAGCTAGGGAACAAAGGGACAAAGCTGAGTCAGAAACTAAAGGCAATATTGACAGTACTGTAAAGGGGGCTTTATCACTGGCAGAAGCATCTTTAGATACATACAATTTTGAAGCTTGTAATCCAAATACATTTTCAGATACTGCTGCTTCAGCTGTACCTTTCCAATGTCTTGACGCCAAAGAAGAAATAAATGGGGATCCTCATTTGGAGTATGATTCTGTCACTGATCAGAATATTGAGAGACGGTCAGCACATGGACATAAACCTCAGCGCCTAGCAGTTGCCAGACAACAAGGCTTGCCCAAATTACAATGGGCTGTAGCCAATGGTTTTCATACAAACCAGAATTCTCCAATGCCAAAACTTGAAGTCCTTCAGAAACATGGAACCCACTGTGATCTAAAGGCATCAGCTATAGTTAATGGTAGTAAAGTATGGAGTCGAAAGTCTAAAACAGAAATTGACAAGGTGGTTTTAAAAACCATTAAAGAGAAAGAACTAGATGAAGCTAAGAATCAAGAAGTTTTGATAGGATCCATATCTGTTAATCTTGGCAATTGCAGCAGCCAATCAGAGGGTAATATGGTGACTTCTCAAAAGGATTGCATGGTGGAGAATGTAGGCAAGCAGAATAGTTCTCTGGATAAACCAGATAAAACTGATATTGTCATCAGTGGCAACAATCGCCCAACAGTTAAGCTTTGGAGGCCAGTTAACCGGCTTGAAAGTAAAGATCCACTTCCAGTCCAAAGTGGTTTGACAGAAGTTGATGCTGTTCATGGAGATGATCAAAACATGTCAAGTCCAAGTTCTTTAAGGGTGTCTAGTACAGATGGTGGTGATATTGGTTTTGAAAAGTATTTCTCCCATCCAGATGGTAGAGCAGATCCAGTAAGCTTTCAGTTTGACATCCAGGCCGCAAAAGCTTTTCTTGCACAGAGATGGAAAGAAGCTATCTCATCAGATCATGTAACATTGGTTGTTTGTCCTGACCCGGAACTTTCTGGGTGCGAGGAGATACAGGATATTGAAATAGCTGCATGTCAATCTTCTGATGTGGATAGCTGCAACATTGTGGCAAATGCAGATAACAGATTACCTGCAACATTCCGAGTGGCTAAATCCAAACCCAGATTGAAGAAGTTTGAAAAGGGAACCATGATAAAGTATATTCCCAAACAGAAGACAAATACCTGATGAGAAGAATAAATTGGATTAGTTAGTTATACAGATATACAGAGTTTGACTTTGTTGCCAATTATGTTAGCAGAGGTCCAAGTTTTACCGGATGATCTTCTGTCAGAATGTTGAAAGTAGGTTTTGCCTCCAAAAGATTTCATATGGGATTTTGGCTTAGTTAGTTCTTTTTACTTGTTGAATTTACCATTTTAATTTTTTTTGTAATAAACTTGTTTTAATTTCCATACAGGTCAACTTTTTTTTTTTTGGATGCATTGGTTATTATTATTAGGCAAGATATTTTCTTCCTTTTAATGGCATAATTGTCTAAATTTTGCTTGTAGCAATTCTATTATTTGGGATAATTCAAAAATCCCTATTTCTTTAGCCTTATCACTTTTGGTGCGTGAC 2418 0.3912 MPIAKLKASGTPDVMKTEDRIDTIIRQAIGKEPFVSFPRASDSPVQWIQLLHALDPQGVQLQKCEKCSREFCSPINYRRHIRVHHRFKKLDKDFTKTRDLLGAYWDKLSLEEAKEVVSFENVVLEEVSGSSILKSLTTLIQNQGFYSFPQYYLMAGAALLDIVQSKPSSFPISSQELFSVLDDASEKTCLCGTAESMQRYVFDGEAGKIGLEPKNLVACTSFLLEQKLVKAWLADKDAEALRCQKQLVEEEEAAQKRQAEILERKRQKKLRQKEQKAREQRDKAESETKGNIDSTVKGALSLAEASLDTYNFEACNPNTFSDTAASAVPFQCLDAKEEINGDPHLEYDSVTDQNIERRSAHGHKPQRLAVARQQGLPKLQWAVANGFHTNQNSPMPKLEVLQKHGTHCDLKASAIVNGSKVWSRKSKTEIDKVVLKTIKEKELDEAKNQEVLIGSISVNLGNCSSQSEGNMVTSQKDCMVENVGKQNSSLDKPDKTDIVISGNNRPTVKLWRPVNRLESKDPLPVQSGLTEVDAVHGDDQNMSSPSSLRVSSTDGGDIGFEKYFSHPDGRADPVSFQFDIQAAKAFLAQRWKEAISSDHVTLVVCPDPELSGCEEIQDIEIAACQSSDVDSCNIVANADNRLPATFRVAKSKPRLKKFEKGTMIKYIPKQKTNT 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01160 674 Coils Coil 238 287 - -
Pste9g01160 674 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 89 IPR013087 -
Pste9g01160 674 ProSitePatterns Zinc finger C2H2 type domain signature. 64 85 IPR013087 -
Pste9g01160 674 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 673 - -
Pste9g01160 674 MobiDBLite consensus disorder prediction 265 290 - -
Pste9g01160 674 MobiDBLite consensus disorder prediction 265 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01160 Pste-Chr9 9155001 9164270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01160 19 671 C2H2 Transcription Factor Family AT4G25610 40.416 5.76e-141 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste9g01160 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01160 9 9155001 9164270 Pste9g01160 9 9155001 9164270 ECH
Pste9g01160 9 9155001 9164270 Pste4g02928 4 20660541 20673046 PCT