Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01140 ATGACATCGCCGGGGTTCACTGGCGGGGCTGGCGCGTCGGACTATTTTGGCGGAGGCGGTGGTTTTACCGGCAGATCCATCCCGGCGGCCACCATGAACAACCCCAACGCCGCCCCTTCCGTCACCGCGAACCTCCATCCTCTCTACCGCACCCAACAACAGAACCTCCCCACAATGTTTCTAGATCCTTCCTCGCAGATCGTACAACGTCAAACACCAACCCTCATCGGTAAGCGCACTCTAACAGAATTCCAAACCTATAACCAAACCAACAATAACCCTAACAACGTCCTCTCCAACCTCTTGCTTCGTTCCGTTAAGCCCCGAACCACTTTCCCTCACCCACACGACTTTCCCATTTCCGAATTGCAAAACCAAAACAACCCTTCCATTTACCAACCACAGCGTTTTGGCGTTCCTTTACTCCACCAGCTTCGCCCTCAGCCCATTAATTTACCCAACAACGGGCCCGGCCCCGGCACCCTGCCCATGTCTGGCCCAAATTTTGGCTACCGTAACAACTCCAATTTGCTTGCTTTACCGCAGAACCGGTTCCGTGTTTCTCTTCCGGTTCCGGTTCAGAGTTCCGAACCGGAGAAGAAGATGATGGACTCTAGGCTTCTGGAATTGGAGAAACAGCTTCTTGAAGATAACGACGAAGAAGGAGAAGCCGATGCTGCGTCTGTCATAACCACGAGTGAGTGGTCTGAGACTTATCAGAATTTAATCAGTCCCGGTCCGGTTCAGAAGCCGGTTTTGACAACCACGTCGCCGACTTCTTCAACCACGTCGTCCACGTCATCTTCCTCCTCCGTGGCTTCGCCTGCTTCTGGATGCTCCAAGCAAACGCTCATGGAAGCCGCATCTGCAATTGTTGAAGGAAAGCATGACGTCGCAGCGGAGATCCTCAACCGGTTGAACGGTGTTAACCGGACTGATAGGTTAACCGATTGCATGGTTTCGGCGTTGAAATCGAGGATGAATCCGGCGGAGCATCCGCCGCCGGTGGCTGAGCTTTTCTCGAAGGAACACGCCGAGTCGACTCACTTGCTTTTGGAAAACTCTGTCTGCTTCAAGGTAGGGCTCATGGCTGCGAATCTCGCGATTTTGGAAGCCGCATTTGAGGAGAAAACGGAGAGCAGGTTCTGCGTGGTGGATTTTGAGATTGGACAGGGGAAGCAGTATTTGAATCTCCTCAACGCGCTCTCCGCGCGTGGCCAGAACGCGGCGGTGAAGATCGCCGCCGTGACGGAGAGCGGCGGCGAGGAGAGAGTGCGTGCCGTGGGAGACATGCTGAGCCGGTACGCGGAGAAGCTGAGGATCGGATTCGAGTTCAAAATCCTCGCGACTCAGAAACTCGCCGAGTTAACTCGCGAGTACTTGGGATGCGACGCGGATGAGGTTCTCGCAGTGAACTTCGCGTTCAAGTTAAACAAGATTCCCGACGAGAGCGTCTCGACGGAGAACCCGCGGGACGAGCTTCTCCGGCGCGTGAAGCGGCTCGCGCCGCGCGTGGTTACCATCGTGGAGCAGGAGATGAACGCCAACACGGCGCCGTTTTTGGCGCGCGTGTCCGAAACGCTGTCATATTACGGCGCGTTGTTGGAGTCGATTGAGGTAGGAAGGGACAGTAACAATAACAGCAACAACTCGGACCGAGTCAGAGTCGAGGAGGGACTGAGTCGGAAGCTACAGAACACGGTGGCGTGCGAAGGAAGAGATCGCGTGGAAAGGTGCGAAGTGTTTGGGAAATGGCGCGCGCGTATGAGCATGGCGGGGTTCGAGTTAAAACCGCTGAGTCAAAGCATGGCCGAGTCAATAAAATCGCGACTCACCTCTGCCAACAACCGAATGAACTCGGGACTCACAGTGAAGGAAGAGAGCGGTGGGATATGCTCTGGATGGATGGGTAGAACACTCGCAGTCGCATCTGCTTGGCGTTAA 1944 0.5504 MTSPGFTGGAGASDYFGGGGGFTGRSIPAATMNNPNAAPSVTANLHPLYRTQQQNLPTMFLDPSSQIVQRQTPTLIGKRTLTEFQTYNQTNNNPNNVLSNLLLRSVKPRTTFPHPHDFPISELQNQNNPSIYQPQRFGVPLLHQLRPQPINLPNNGPGPGTLPMSGPNFGYRNNSNLLALPQNRFRVSLPVPVQSSEPEKKMMDSRLLELEKQLLEDNDEEGEADAASVITTSEWSETYQNLISPGPVQKPVLTTTSPTSSTTSSTSSSSSVASPASGCSKQTLMEAASAIVEGKHDVAAEILNRLNGVNRTDRLTDCMVSALKSRMNPAEHPPPVAELFSKEHAESTHLLLENSVCFKVGLMAANLAILEAAFEEKTESRFCVVDFEIGQGKQYLNLLNALSARGQNAAVKIAAVTESGGEERVRAVGDMLSRYAEKLRIGFEFKILATQKLAELTREYLGCDADEVLAVNFAFKLNKIPDESVSTENPRDELLRRVKRLAPRVVTIVEQEMNANTAPFLARVSETLSYYGALLESIEVGRDSNNNSNNSDRVRVEEGLSRKLQNTVACEGRDRVERCEVFGKWRARMSMAGFELKPLSQSMAESIKSRLTSANNRMNSGLTVKEESGGICSGWMGRTLAVASAWR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01140 647 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 256 635 IPR005202 -
Pste9g01140 647 ProSiteProfiles GRAS family profile. 271 647 IPR005202 -
Pste9g01140 647 MobiDBLite consensus disorder prediction 242 277 - -
Pste9g01140 647 Pfam GRAS domain family 281 647 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01140 Pste-Chr9 8695557 8697500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01140 49 647 GRAS Transcription Factor Family AT5G52510 47.887 2.50e-153 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste9g01140 GRAS 2.9e-88 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01140 9 8695557 8697500 Pste9g01140 9 8695557 8697500 ECH