Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01136 ATGATACTTGTCTATGAGTATGTAGAAAAAGGTCCACTCAAGAAGCATCTGTATGGCTCAGCTGTACAAACACCTTTGTCTTGGAAGCAGCGGCTTGAGATATGCATTGGAGCAGCTAGAGGTCTCCACTATCTACACACTGGTTTCGCCCAAGGAATCATCCACCGTGACATCAAATCAACAAATATTTTGCTTGATGAAAACTATGTGGCCAAGGTTGCTGATTTTGGTCTTTCAAGATCTGGACCTTGTCTCAATGAAACACATGTGAGTACTGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCCGAGTATTTCCGAAGGCAACAGCTTACAGATAAGTCAGATGTTTACTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGCCAGACCTGCTGTAGATCCACAACTTGATAGGGAACAGGTGAACTTAGCGGAGTGGGCACTTGAATGGCAGAAAAAGGGCATGCTGGAGCATATTATCGATCCCTATCTTGTTGGGAAGATAAAGCAAAGCTCATTGAAAAAATTTGGTGATACAGCAGAGAAATGTTTGGCTGACTATGGTGTTGATAGGCTAACTATGGGTGCTGTATTGTGGAATTTGGAATATGCACTTCAGCTCCAAGAAAGTGAACAAGAAGAGGAGCCATTTGATGATAGAATTTCGCAGGAAGCAATGAATGTGACAACTACAGTAATTCCTGGGAGTCCTTCTAGGAACACAAGAAGAGCGAGAGATAATGATAATGGTTATTCAGACATAAGTGCTACCGAAGTTTTTTCTCAACTAATGAACAATAAAGGTAGATAG 816 0.4142 MILVYEYVEKGPLKKHLYGSAVQTPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCLNETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLDREQVNLAEWALEWQKKGMLEHIIDPYLVGKIKQSSLKKFGDTAEKCLADYGVDRLTMGAVLWNLEYALQLQESEQEEEPFDDRISQEAMNVTTTVIPGSPSRNTRRARDNDNGYSDISATEVFSQLMNNKGR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01136 271 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01136 271 PANTHER OS07G0166700 PROTEIN 1 210 IPR045272 GO:0004714|GO:0006468
Pste9g01136 271 MobiDBLite consensus disorder prediction 235 254 - -
Pste9g01136 271 Gene3D Transferase(Phosphotransferase) domain 1 8 232 - -
Pste9g01136 271 ProSitePatterns Serine/Threonine protein kinases active-site signature. 53 65 IPR008271 GO:0004672|GO:0006468
Pste9g01136 271 Pfam Protein tyrosine and serine/threonine kinase 2 131 IPR001245 GO:0004672|GO:0006468
Pste9g01136 271 SMART serkin_6 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01136 271 FunFam Receptor-like protein kinase FERONIA 8 219 - -
Pste9g01136 271 SUPERFAMILY Protein kinase-like (PK-like) 2 201 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01136 Pste-Chr9 8653498 8654313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01136 1 271 Receptor kinase-like Gene Family AT3G46290 63.345 5.10e-122 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pste9g01136 PK_Tyr_Ser-Thr 9.7e-30 CL0016