Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01125 CTTTTTCTTACATATAAGTTGGACATAGGTTTGGCCACAATACAAACCCACCATTTTAACTTTAACTCTCTGAATGGTATCCAAAAACCCCAACCCACCCGAGGGATTCTACTTGGATCCCACCGGCATGGCTCTCCACGGCATGCCTCCCTTCGCCGCCGTCTCCCCCGCCTCCGCCACCGCCACCGCTGTCTCCCCCGCCAACTCGTCGGACGACGCCTCCAAGAAGATCCGCAAGCCTTACACCATCACCAAGTCGCGGGAGAACTGGACCGAACCCGAACATGACAAGTTCCTCGAAGCCCTTCAACTGTTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACTGTTATACAGATACGTAGCCATGCACAGAAATACTTTCTAAAAGTTCAGAAGAGTGGGACAAGTGAACACCTTCCGCCGCCCAGGCCTAAGAGAAAAGCTGCCCATCCATATCCTCAAAAAGCTTCAAAAAATGCTCCTGTTCTCTCACAAGTATCAGGATCTTTTCAATCTTCATCTGCTTTGCTTGAACCTGGTCATATCCTGAAGAATGACTCCCCAGCTATGCTTAAAACTCCCATGAAAACTGTGGTGTCGTCCTGGTCAAACAACACCTTGCAAGTTGTCAATTTATCCCCTGTGACCAAAGTGAATAATCCTTGCAGTAGTGGTGAAAGCACCCCTAAAGTGCACCCAGTTGGTGAATCTAACGGTCAAGGGAATAAAATCCATCCGTTGAGAGGCAAGGCTTTAGTAGTTTTCCTATATATTCTTCCAGATTTTACTCAGGTATATGGATTCATTGGCAGTGTATTTGACCCGAATGCAACTGAGCATCTGCAGAAACTAAAAAAGATGGACCGTATAGATGTTGAGACCGTGCTACTGTTAATGAGAAACCTGTCTATCAATTTAACTAGCCCAGATTTTGAGGATCATACCCATTCCATGCACGATGAGCAGTTGAATAGAGCTAATGGGATGGAGGCAGAAAATGGCTTCATTTGCCACCAATTGGATGCAGTCAGGGTTTTTTATTTTCCATGA 1066 0.4597 MVSKNPNPPEGFYLDPTGMALHGMPPFAAVSPASATATAVSPANSSDDASKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPVLSQVSGSFQSSSALLEPGHILKNDSPAMLKTPMKTVVSSWSNNTLQVVNLSPVTKVNNPCSSGESTPKVHPVGESNGQGNKIHPLRGKALVVFLYILPDFTQVYGFIGSVFDPNATEHLQKLKKMDRIDVETVLLLMRNLSINLTSPDFEDHTHSMHDEQLNRANGMEAENGFICHQLDAVRVFYFP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01125 330 CDD SANT 65 108 IPR001005 -
Pste9g01125 330 PANTHER SWI/SNF COMPLEX-RELATED 32 291 - -
Pste9g01125 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Pste9g01125 330 MobiDBLite consensus disorder prediction 113 142 - -
Pste9g01125 330 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Pste9g01125 330 SUPERFAMILY Homeodomain-like 57 113 IPR009057 -
Pste9g01125 330 ProSiteProfiles SANT domain profile. 61 112 IPR017884 -
Pste9g01125 330 Gene3D - 65 113 - -
Pste9g01125 330 NCBIfam myb-like DNA-binding domain, SHAQKYF class 61 110 IPR006447 GO:0003677
Pste9g01125 330 SMART sant 62 110 IPR001005 -
Pste9g01125 330 Pfam Myb-like DNA-binding domain 63 108 IPR001005 -
Pste9g01125 330 FunFam protein REVEILLE 6 isoform X1 65 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01125 Pste-Chr9 8477292 8484522 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste9g01125 Myb_DNA-binding 4.4e-10 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01125 9 8477292 8484522 Pste4g02838 4 19949632 19954554 ECH
Pste9g01125 9 8477292 8484522 Pste9g01125 9 8477292 8484522 ECH
Pste9g01125 9 8477292 8484522 Pste4g02838 4 19949632 19954554 PCT