Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01103 ATGAGTACTCATGAGGATTGGGATCTCTTTGCCATAGTTAGAAGTTGCAAAGCTGCTACCTTTACTGCCACCACAAACACAGAAACCCCGCCCAGCACCACTTCTACCACCACCAATGGATCCTCTAACATTACCTCTCGCTTAGATGTGAGCCAAGAAAATGGCTCATTCTCCTTTCCCAATCTTTTGCAACCACCAACCAATGGGTTCCAAGAGCTTCACCAATTGTTAATGAACTTCAACCCCACCACCAGCACCATTAGTAGCACTAGCACTATCACTAGTGGCCTTGGCATCAATCCCAATTCCACTTTTTCTGAAGTTGAGGGATTCATTGGACAACAGCAGATACAACAAGGTCACCAACACCTTCTGGTTCCTGCTCCCACAAATCACACCTCCATTGGAGCACTCTCCACTACTGGTTTTGAAAGATTCCAACACCACCAACAACAGCAACCACAAATCCCAGAACCAAACCAACCACCCCTTCAAGCACCACAAACAAGTCCCATCCTTTCACCAACCGCACAACCACAAACACCCAGATCAAGAAAAAGAAAAAACCACCAGAAGAAAATGGTGTGTCATGTAACTGCTGACAATCTCTCAGCAGACTTGTGGGCATGGCGAAAATACGGACAAAAACCCATCAAAGGCTCTCCATATCCAAGGAACTATTACAGATGCAGTAGCTGCAAAGGTTGCGCCGCCAGAAAGCAAGTGGAGCGAAGCACAACCGAACCCAACATGTTCATCGTGACCTACACCGGCGATCACAAACACGCGAAACCCGTTCACCGGAACTCCCTCGCCGGAAGCACCAGAATCAAACCGTCCACGACCCGTTTACCAGAAACCCACGAAACCGGTATAAAAAAAGAAAACCCAAACTCCTCAAATTCCGAGCTTTCCCCCATGTTATCAACTTCCGACACGCCGGAAAATGAGGAAACGGTGGCCACCGGTGAACCCGATTTTCCAGAAATGGAAATTGACCCAGATGAGCCCTCTGAAAACGACGACGACGACGGCGTTTTGATACCCAACAGGGATGCCATATCCGACGCTGTTCTCTTAGGGTTGACCAATGTTGATTGCGACGCCGTTTTGACGTTAGGAATTGATCAGAATAACCCTCTCGGGTAGCCCGATCCGACTCCGACCCGTTTTCCAATTCGGTGTAGTCTCTTCAAGCGACTCAGATTCTTGCCCCAAAACTCGCTGACCTACATTATTGTAATGATTCTGTTTCTTTTTCTCTAAA 1267 0.4775 MSTHEDWDLFAIVRSCKAATFTATTNTETPPSTTSTTTNGSSNITSRLDVSQENGSFSFPNLLQPPTNGFQELHQLLMNFNPTTSTISSTSTITSGLGINPNSTFSEVEGFIGQQQIQQGHQHLLVPAPTNHTSIGALSTTGFERFQHHQQQQPQIPEPNQPPLQAPQTSPILSPTAQPQTPRSRKRKNHQKKMVCHVTADNLSADLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCAARKQVERSTTEPNMFIVTYTGDHKHAKPVHRNSLAGSTRIKPSTTRLPETHETGIKKENPNSSNSELSPMLSTSDTPENEETVATGEPDFPEMEIDPDEPSENDDDDGVLIPNRDAISDAVLLGLTNVDCDAVLTLGIDQNNPLG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01103 382 Gene3D WRKY domain 188 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste9g01103 382 SMART WRKY_cls 204 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste9g01103 382 MobiDBLite consensus disorder prediction 23 44 - -
Pste9g01103 382 MobiDBLite consensus disorder prediction 146 194 - -
Pste9g01103 382 MobiDBLite consensus disorder prediction 263 349 - -
Pste9g01103 382 SUPERFAMILY WRKY DNA-binding domain 199 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste9g01103 382 MobiDBLite consensus disorder prediction 294 318 - -
Pste9g01103 382 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 335 IPR044810 GO:0003700
Pste9g01103 382 ProSiteProfiles WRKY domain profile. 199 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste9g01103 382 FunFam WRKY transcription factor 22 187 258 - -
Pste9g01103 382 Pfam WRKY DNA -binding domain 206 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste9g01103 382 MobiDBLite consensus disorder prediction 322 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01103 Pste-Chr9 8106351 8107898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01103 183 278 WRKY Transcription Factor Family AT5G52830 80.208 2.37e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste9g01103 WRKY 2e-24 CL0274