Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01085 GCATGCTATAAATAGGCATTGAGGAGGGACACACACAGAGCGAGTCATTGCCTTGTCAAAATCCTTTAGACCAACGTTGTCTTCGGAGCCTCATTTTTTTTTTTACATAGGTTGTTAAGTTTTTCTGTTGTTGTTGGTGTTCTTGTACACAATATCTGGGGTACCCATTTATCCTAATCATAGTTTAATCCTGATACCCTTTGGTGAGAAATTGTTTCTGGGGTCTTAAAGGACCGAACTTGTATTCAGGGCCGTGATGGAACAGAAGCACGTTCTGTTGTCAGCATTGAGTGTTGGGGTTGGGTTGGGTGTGGGGCTTGGGTTGAGTTCAGGGCAGAAATGGGTTGGCGGGAACCGTGACTCTGATGACCTTTCTGTGGAGCAGATTGTGCAGGAGCTCAAGAAACTGGTCGTTGAAGGAAAGGACAGCAAGGTTACATTTGAAGAGTTTCCTTATTACTTAAGTGAGAGAATTCGAGTTTTATTGACAAGTGCTGCATATGTTCATTTAAAACATCTTCACTTTTCCAAGCACACCAAGAACCTCTCACCTGCAAAAAGCAGGGCTATTTTGCTATCTGGTCCAACAGAGCTTTACCAGCAAATGCTTGCCAGAGCTTTAGCACATTACTTTGAATCAAAGTTGCTGTTGTTAGATATCACTGACTTTTCTGTGAAGTTGCAGAACAAATTTGGATGTTCCAGAAAAATACCATCTTTCAGAAGGTCAATATCTGAGGTGACATTGGAGCGAATGTCTGGTTTGTTTGGTTCCTTTTCGATGCTTCCTTCAACAGGAGAAATAAGAGGAATTCTGCGTCAACAAAGCAGTGGTGCTGAAAGTGCCAATCCTCCAAAGCTTAGGAGGAATGCATCTGCTGCATTTGATATAAGTAGCACTGCTTCTCAGTGTGGTCCAACATTTGCAGCTCCTTTAAAGCGCACTAGTAGCTTGTGTTTTGATGAAAAGCTCTTTGTGCAATCACTTTACAAGCTTGTGGTTTCTATTGCAGAAACTAGTTCCATTATTTTATACATCAGGGATGTTGAGAAGCTCATTCACCAAACACCAAGATTATATGATTTATTACAGAAAATGATAAAGAAACTGTCAGGCTCAGTGTTGATACTTGGTTCCCAGATATTAGATTCAGAAGATGATTGCAAAGTTGATGAAAGGATCACTGCACTATTCCCCTATAACATTGAGATCAAAGCTCCTGAAGATGAAACTCATCTTGGCAGTTGGAAAGGCCAACTGGAAGAGGACATGAAAGTTATTCAGTTCCAAGATAACAGAAACCACATTGCTGAAGTACTAGCGGCAAATGACATTGACTGTGATGACTTGAATTCAATCTGCCATGCAGACACAATCTTACTCAGCAATTATATTGAAGAAATTGTAGTATCTGCAATATCATACCATTTGATGAATACCAAGGATCCAGAATACCGAAATGGAAAGCTAGTTATATCAGCCAATAGTTTGTCCCATGGATTGAGTCTGTTTCAGGAAGGCAAGAGTAGTGGGAATCTGAAGACTAATGAATCTAACAAGGAAAATGCTGGAGAAGATATTACTGGTACAAAGAATGAAGTGAAGTGTGACAACCAAGCACCCGAAAACAAGAGTGAGACAGAGAAATCCATCCCAGTAACAAAGAAAGATAGTGAAAATCCTACACCTGCAAAAGCAGAAATTCCTGACAATGAGTTTGAGAAGCGCATAAGACCAGAGGTTATCCCTGCAAATGAGATAGGGGTTACTTTTGCAGATATTGGTGCATTGGATGAGATCAAAGAATCACTTCAAGAGCTGGTAATGCTTCCCCTTAGAAGGCCAGATCTCTTCAAGGGTGGGCTTCTTAAACCATGTAGAGGTATATTGCTTTTCGGGCCTCCTGGTACTGGAAAAACAATGCTAGCGAAGGCAATTGCAAATGAGGCTGGTGCAAGTTTCATTAATGTCTCGATGTCAACTATCACGTCAAAATGGTTTGGAGAAGATGAAAAGAATGTCCGAGCTTTGTTCACACTAGCAGCTAAGGTTGCCCCAACAATTATCTTTGTTGATGAGGTTGACAGCATGCTTGGACAGAGGACTAGAGTAGGAGAGCATGAGGCCATGAGGAAGATTAAAAATGAATTCATGACACACTGGGATGGGTTATTATCTGGACCTAATGAGCAAATTTTGGTTCTTGCTGCAACCAATAGGCCATTTGACCTTGATGAAGCTATCATAAGACGGTTTGAGCGCAGAATCCTGGTAGGTCTTCCATCTGTTGAGAACAGGGAAATGATCTTGAAGACTCTTTTGGCTAAAGAAAAACATGAAAATTTAGACTTCAAAGAGCTGGCAATCATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCATCACTGCAGCTTACCGCCCTGTTAGGGAGCTAATACAGCAGGAGAGAAAGAAGGAAATGGAAAAGAAGAAAAGAGAAGCAGAAGGCCAAAGCTCTGAAGATGCTTCAAACAAAAAAGATAAGGAACATCAAGAAATTACCCTTAGGCCTTTAAACATGGAAGACATGAAACAGGCTAAGAGTCAGGTGGCTGCTAGTTTTGCATCAGAAGGATCCGTAATGAATGAGTTGAAGCAGTGGAATGATTTGTATGGAGAAGGTGGTTCAAGGAAGAAACAACAGCTCACGTACTTCCTTTAGAATGTTAAATGCTACTTGTACTTTGGATTTTCCATTCATCCTCAATCATACATTTTAAGCAAGGAAGCAGTCCTTCACCACAGATGTTGAACTCAGCATGCTTAAATGTCTCACTACACATCCAGAATGTCAGAGATGTTATGATTCCCAGAAAGCCCAAGTGCAAGCATCCTCTAAACGCGGGTGGATCTTCAAGCATTATGTTTAAGAGATGGTTCTCACTTCTCAGTTTGTTTGGATTTTCTACAAACAAATGACCACCTGTATCGGGGGATTTATATTCTCTCATGCATGGTTTTGGAAGATGCAATGGTTTTGTAGGAAGTAGGGGTATTTTAATTCACGCCAAACCGTATGCTGTATTATATATGAATAATATGATTAGAGTTTTCAGACAGTAGAATTTTGTACATTGATCTTGCAGTTGTACTGCTCATACCGTTTGCTTCAATATTTATGTCATTTTTCTTTGCATTGTATAAGACATCTAATTCATCTTTAAACTGAAATATCTAGGAAGAGAAATCCAAAATGAAATAAAGATATC 3257 0.4007 MEQKHVLLSALSVGVGLGVGLGLSSGQKWVGGNRDSDDLSVEQIVQELKKLVVEGKDSKVTFEEFPYYLSERIRVLLTSAAYVHLKHLHFSKHTKNLSPAKSRAILLSGPTELYQQMLARALAHYFESKLLLLDITDFSVKLQNKFGCSRKIPSFRRSISEVTLERMSGLFGSFSMLPSTGEIRGILRQQSSGAESANPPKLRRNASAAFDISSTASQCGPTFAAPLKRTSSLCFDEKLFVQSLYKLVVSIAETSSIILYIRDVEKLIHQTPRLYDLLQKMIKKLSGSVLILGSQILDSEDDCKVDERITALFPYNIEIKAPEDETHLGSWKGQLEEDMKVIQFQDNRNHIAEVLAANDIDCDDLNSICHADTILLSNYIEEIVVSAISYHLMNTKDPEYRNGKLVISANSLSHGLSLFQEGKSSGNLKTNESNKENAGEDITGTKNEVKCDNQAPENKSETEKSIPVTKKDSENPTPAKAEIPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLSGPNEQILVLAATNRPFDLDEAIIRRFERRILVGLPSVENREMILKTLLAKEKHENLDFKELAIMTEGYTGSDLKNLCITAAYRPVRELIQQERKKEMEKKKREAEGQSSEDASNKKDKEHQEITLRPLNMEDMKQAKSQVAASFASEGSVMNELKQWNDLYGEGGSRKKQQLTYFL 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01085 817 Gene3D - 676 779 - -
Pste9g01085 817 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 503 678 - -
Pste9g01085 817 MobiDBLite consensus disorder prediction 734 768 - -
Pste9g01085 817 MobiDBLite consensus disorder prediction 422 487 - -
Pste9g01085 817 Pfam AAA+ lid domain 696 739 IPR041569 -
Pste9g01085 817 MobiDBLite consensus disorder prediction 734 787 - -
Pste9g01085 817 SMART AAA_5 540 677 IPR003593 GO:0016887
Pste9g01085 817 Coils Coil 726 748 - -
Pste9g01085 817 Pfam ATPase family associated with various cellular activities (AAA) 544 674 IPR003959 GO:0005524|GO:0016887
Pste9g01085 817 Gene3D - 503 783 IPR027417 -
Pste9g01085 817 ProSitePatterns AAA-protein family signature. 647 666 IPR003960 GO:0005524|GO:0016887
Pste9g01085 817 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 44 816 - -
Pste9g01085 817 MobiDBLite consensus disorder prediction 434 487 - -
Pste9g01085 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 732 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01085 Pste-Chr9 7916297 7924111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01085 504 733 Calmodulin-binding Proteins AT3G56690 39.744 1.24e-41 162