Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01068 AGAAAGGAGCAAGGAGAAACTATAAAGAAGATGGAAGTTTTTTGGAGCATAATCTGTGCAGATTCTGTTTCTTCAAAGACTCTTGGAAAGCTTTTCTGTTATGATTTAAAGCTTTTGAAAGATCCTTCAGCATGCATCAACCATTTATTGGTCATTTGCTTTGATGTGTTACTGTTGATCATGCTGTCATTCGCTATGATACAGAAGTTTCTATCGAGACCATGCAGCGGTCTAATCCGAGTGGAAAGATATTCAAACTTGCAATTATGTTCTGCTATAACAAGTGGTTCTCTTGGATTGCTTCATTTGTTCTTAGGCATTTGGGTTTTAGAGGAGAAGTTAAGGAAAAATCATACTATTTTTCCACTTAGCTGGTGGTTGCTAGAACTCTTTCAGGGATTCACATGGTTGTTAGTAGGTTTAACTGTAAGTCTTCAGCTGAAACAACTTTCAAGAATATGGTTATGGTTGTTCTCTATACTTACACTCTTTGTTTATGGTACTTTCTGTCTTATATCGTTGTCTTATTCAATTAGCAACAGAGAACTGTCCTTCAAGGTAGTTTTAGATGTTCTATCTTTCTCTGGATCTTTTTTACTACTCTTATGCACATATAGAGTGTGTAAATATGAAGAAACTCACACAGAAAGTAATGAAATCCTTTATGCCCCTTTAAGTGGCCAGATCAATGAAGGTGGTCCTATTAGGTATGTAACCCCATTTGCGAGAGCTGGATTCTGTAGTAGGATGGTATTTTGGTGGTTGAATCCACTTATGAAAAAGGGACAAGAGAAAACACTTGAAGATGACGACATCCCAAAGTTGCGGGAGTTAGATAAAGCAAAAAGTTGTTATTTGTCATTTGAAGAACAATTGAACAAACAGATTGAAAAAGATCCATCATCACATGTATCAATTTTGTGGATAATAATTCTGTGCCACCGAAAAGAGATTCTGATATCAGGATTCTTTGCATTGCTTAAGGTGCTGACTGTGTCTTCTGGTCCTTTACTTCTAAACGCCTTTATATTGGTTGCTGAGGGCAGTGAAAGTTTTAAATATGAGGGTTATGTATTGGTCTTATTACTTTTCATTATAAAGATCACTGAGTCCCTATCACAAAGGCAGTGGTTCTTCCGCACTAGACTTATTGGGATGAAAGTTAGGTCACTGCTAACCGCAGCTATTTATAAAAAAATGTTGAGGTTGTCCCATGTTGCTAGATTGACACACTCTGGTGGTGAGATAATGAATTATGTGACAGTGGATGCTTATAGAATTGGAGAATTTCCATTTTGGTTTCACCAAACATGGACAACAAGTGTCCAATTATGTATTGCATTAGTAATACTTTTTCGTGCCATTGGGATGGCAACAATTGCCTCTTTGGTGGTGATAGTTCTTACTGTTCTATGTAATACTCCAGTATCAAAGTTGCAACACAAGTTTCAGAGCGAACTTATGGTGGCACAAGATGAGAGATTGAAAGCTAGTTCTGAGGCTCTTGTGAATATGAAAGTTCTAAAGCTATATGCATGGGAAAACCATTTTAAAAATGCTATAGAAAAGTTAAGAAACGTGGAGCTTAAATTGTTAGCTGCAGTGCAACTAAGAAAGGCATACAACATATTGATCTTTTGGTCCTCTCCTGTTTTGGTCTCTGCTGCTTCCTTTGGGGTATGTTACTTCCTGAAAGTTCCTTTGCATGCAAATAATGTTTTCACTTTTGTGGCAGCTTTGCGGATTGTGCAAGAGCCAATTACCACCATCCCGGATGTTATTGGGGTGGTCATTCAAGCAAAGGTTGCATTCACTCGGATTATTAAGTTCCTTGAAGCACCAGAACTACAAAGTAAAAATTTTAGGAACAAGTGCTTTGTTAACAATCTTAACAACTCAATTTTAATCAGACATGCCGATTTTTCATGGGAAGATAGTGTATCAAAACCAACATTGAGGAACATAAATTTGGAGGTTAGACATGGGCAAAAGGTAGCTATTTGTGGAGAAGTTGGCTCAGGCAAATCAACCCTCTTATCACTGATTCTTGGAGAAGTCCCTATTACAAAAGGAACTATTGAAGTTTATGGGAAGTTTGCTTATGTTTCTCAAACAGCATGGATACAAACAGGTACAGTACGGGAAAATATTTTATTTGGATCTATTTTGGAAGCTGGAAGATATGAAGAAACACTTCATCGATCTTCACTAGTGAAGGACTTGGAGTTGTTTCCCAATGGTGACCTAACGGAAATAGGTGAGAGAGGAGTTAATCTAAGTGGAGGTCAGAAACAGCGAATTCAACTTGCACGTGCTCTTTATCAGAATGCTGATATATATCTCCTGGATGATCCATTCAGTGCTGTTGATGCACATACTGCCACAAACTTGTTTAATGAATACATCATGGAAGGACTTAAAGAGAAAACTGTCTTACTTGTAACTCATCAAGTTGACTTCCTTCCAGCATTTGATTCTATTTTGTTAATGTCAGACGGGGAAATCCTTGAAGCCGCTCGTTATCATCATCTATTGAGCTCAAGCAAACAATTTCAGAACCTTGTCAATGCTCACAAGGAGACTGCTGGTTCTGACAAGCTTGTTAATGTTACTTCTGCCAAGAGACGTCCAACTTTTGCTGGAGATATTACACAAACTTTGATGAAGAACCAGTTCAATGTAGAACATACAAATCAACTAATAAAGCAAGAAGAGAGGGAGATAGGAGACACAGGGTTGAAGCCTTACTTGCAATATCTGAATCACATGAAATGCTATATATACTTCTCTGTGGCTGGTATTTGTCACCTTACATTTGCAATTTGCCAAATATTGCAAAACTCATGGATGGCTACTAATGTAGACAATCCCCGTGTTAGCACGTTGCAGTTGATTGTAGTTTACTTCTTGATTGGAGTTGTTTCAATACTTTTCATGTTGGTCAGAAGTCTACTTCTTGTTTCTTTGGGTTTTCAATCATCAAAATATATTTTTTTACAGTTAATGAACTCACTTTTTCGTGCACCAATGTTATTTTATGACTCTACACCATTAGGAAGGATACTTAGTAGGCTCTCATCAGATCTAAGCATTGTGGATCTTGATATCCCATTTAGCATCGCCTATGTTGTGGGAGCTACTATAAACGCTTGTTCAACTCTTGCAGTTTTAGCAGTTGTCACTTGGCCAGTCTTGGTTATCTCAATACCACTAGTTTATATTGCAACTCGCTTGCAGAGATACTACTTTGCCTCTGCTAAAGAAGTAATGCGGATGAATGGCACAACAAAATCCTTTGTAGCTAATCATATCGCTGAAACTGCTGCTGGAGTTGTGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTTTTTGCAAAGAATCTTGATTTGATTGATATCAATGCTAGTCCTTTCTTCCATAATTTTTCCTCAAATGAGTGGTTGATCCTACGTTTAGAAATTGTAGCTGCAGTTGTTCTTGCCTCCGCAGCACTTAGCATGGTCTTGTTTCCCTCTGGGACTTTCACATCTGGATTTATTGGCATGGCTCTCTCTTATGGCCTTACACTAAACTTTCAGTTAGTATTTTCCATTCAAAGTCAATGCACTCTTGCAAATTATATAATATCCGTAGAGAGGCTATATCAATATATGCATATACAAAGTGAGGTTGAAGAAGTATTAGAAACAAAACGTCCTCCTTTGAATTGGCCAGATGAAGGTGAAGTAGAAATAAATGACTTGCAGGTACGATACAGGCATGATGGACCACTTATACTCCATGGAATCACATGCACATTCCAAGCAGGGCACAAAATTGGAATTGTTGGTAGGACAGGCAGTGGGAAGTCTACTCTTATTAGTTCTTTATTTCGTCTTGTGGAGCCTGCGGGTGGAAAAATTGTAGTTGACGGGATAGACATCTCTTCTATTGGCCTTCATGATTTGAGGTCTCGTTTTGGTGTTATACCTCAGGATCCTACTCTTTTTAATGGGACGGTTAGATACAATTTGGACCCTCTATCTCAACACTCTGATCAAGAGATATGGGAGGTTCTAGGGAAGTGTCAATTGCGAGAAGTTGTCCAAGAGAAAGAAAAGGGCCTAAACAACTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGACAGCTATTTTGTTTGGGGCGTGCTATTTTGAGAAGTAGTAAGATATTGGTGCTGGATGAAGCAACAGCATCAATTGATAATGCAACTGATTTGATTCTGCAGAAAACCATTAGGACTGAATTTGCTGATTGTACTGTGATCACAGTAGCACACAGAATACCAACTGTGATGGATTGCACCATGGTTCTTTCAATCAGTGATGGAAAATTAGTAGAGTATGATGAGCCAGATGCCTTGATGAAGAGAGAAGGGTCGTTGTTCAGACAACTTGTCCAAGAATATTGGTCTCATTTTCAGTCTACAGAATCCCATTAA 4470 0.3828 RKEQGETIKKMEVFWSIICADSVSSKTLGKLFCYDLKLLKDPSACINHLLVICFDVLLLIMLSFAMIQKFLSRPCSGLIRVERYSNLQLCSAITSGSLGLLHLFLGIWVLEEKLRKNHTIFPLSWWLLELFQGFTWLLVGLTVSLQLKQLSRIWLWLFSILTLFVYGTFCLISLSYSISNRELSFKVVLDVLSFSGSFLLLLCTYRVCKYEETHTESNEILYAPLSGQINEGGPIRYVTPFARAGFCSRMVFWWLNPLMKKGQEKTLEDDDIPKLRELDKAKSCYLSFEEQLNKQIEKDPSSHVSILWIIILCHRKEILISGFFALLKVLTVSSGPLLLNAFILVAEGSESFKYEGYVLVLLLFIIKITESLSQRQWFFRTRLIGMKVRSLLTAAIYKKMLRLSHVARLTHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSVQLCIALVILFRAIGMATIASLVVIVLTVLCNTPVSKLQHKFQSELMVAQDERLKASSEALVNMKVLKLYAWENHFKNAIEKLRNVELKLLAAVQLRKAYNILIFWSSPVLVSAASFGVCYFLKVPLHANNVFTFVAALRIVQEPITTIPDVIGVVIQAKVAFTRIIKFLEAPELQSKNFRNKCFVNNLNNSILIRHADFSWEDSVSKPTLRNINLEVRHGQKVAICGEVGSGKSTLLSLILGEVPITKGTIEVYGKFAYVSQTAWIQTGTVRENILFGSILEAGRYEETLHRSSLVKDLELFPNGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYIMEGLKEKTVLLVTHQVDFLPAFDSILLMSDGEILEAARYHHLLSSSKQFQNLVNAHKETAGSDKLVNVTSAKRRPTFAGDITQTLMKNQFNVEHTNQLIKQEEREIGDTGLKPYLQYLNHMKCYIYFSVAGICHLTFAICQILQNSWMATNVDNPRVSTLQLIVVYFLIGVVSILFMLVRSLLLVSLGFQSSKYIFLQLMNSLFRAPMLFYDSTPLGRILSRLSSDLSIVDLDIPFSIAYVVGATINACSTLAVLAVVTWPVLVISIPLVYIATRLQRYYFASAKEVMRMNGTTKSFVANHIAETAAGVVTIRAFEEEDRFFAKNLDLIDINASPFFHNFSSNEWLILRLEIVAAVVLASAALSMVLFPSGTFTSGFIGMALSYGLTLNFQLVFSIQSQCTLANYIISVERLYQYMHIQSEVEEVLETKRPPLNWPDEGEVEINDLQVRYRHDGPLILHGITCTFQAGHKIGIVGRTGSGKSTLISSLFRLVEPAGGKIVVDGIDISSIGLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLREVVQEKEKGLNNSVVEDGSNWSMGQRQLFCLGRAILRSSKILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTMVLSISDGKLVEYDEPDALMKREGSLFRQLVQEYWSHFQSTESH 1489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01068 1489 Pfam ABC transporter transmembrane region 319 585 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01068 1489 Pfam ABC transporter transmembrane region 933 1190 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01068 1489 ProSitePatterns ABC transporters family signature. 759 773 IPR017871 GO:0005524|GO:0016887
Pste9g01068 1489 CDD ABCC_MRP_domain1 634 834 - -
Pste9g01068 1489 CDD ABCC_MRP_domain2 1241 1461 - -
Pste9g01068 1489 Gene3D ABC transporter type 1, transmembrane domain 891 1225 IPR036640 GO:0005524|GO:0016020
Pste9g01068 1489 FunFam ABC transporter C family member 5 892 1224 - -
Pste9g01068 1489 Gene3D ABC transporter type 1, transmembrane domain 307 610 IPR036640 GO:0005524|GO:0016020
Pste9g01068 1489 SMART AAA_5 661 834 IPR003593 GO:0016887
Pste9g01068 1489 SMART AAA_5 1269 1461 IPR003593 GO:0016887
Pste9g01068 1489 FunFam ABC transporter C family member 10 617 870 - -
Pste9g01068 1489 Pfam ABC transporter 1260 1408 IPR003439 GO:0005524
Pste9g01068 1489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 626 857 IPR027417 -
Pste9g01068 1489 Gene3D - 1226 1479 IPR027417 -
Pste9g01068 1489 CDD ABC_6TM_ABCC_D2 929 1218 IPR044726 GO:0140359
Pste9g01068 1489 FunFam ABC transporter C family member 3 1226 1478 - -
Pste9g01068 1489 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 636 857 IPR003439 GO:0005524
Pste9g01068 1489 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 242 1477 - -
Pste9g01068 1489 Gene3D - 611 876 IPR027417 -
Pste9g01068 1489 Pfam ABC transporter 652 786 IPR003439 GO:0005524
Pste9g01068 1489 CDD ABC_6TM_ABCC_D1 320 607 IPR044746 GO:0140359
Pste9g01068 1489 SUPERFAMILY ABC transporter transmembrane region 916 1225 IPR036640 GO:0005524|GO:0016020
Pste9g01068 1489 FunFam ABC transporter C family member 10 302 615 - -
Pste9g01068 1489 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1243 1477 IPR003439 GO:0005524
Pste9g01068 1489 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 319 599 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01068 1489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1234 1476 IPR027417 -
Pste9g01068 1489 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 931 1206 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01068 1489 SUPERFAMILY ABC transporter transmembrane region 307 612 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01068 Pste-Chr9 7685331 7691715 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01068 607 880 Calmodulin-binding Proteins AT2G36910 27.365 5.35e-23 105