Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01066 GAAAGCCACCTTTCTGCTATGATTTCAAGTTTCTGAAAGACCCTTCAACATGCAGCTACCAGTTCTTGATCATTTGCTTTGATATGCTAGTGCTGATCTTGCTAGCTATCATTTTGATCCAGAAATCGTTGTTTAAGCCATTCCGGGCTCAGTTTCCCGTGGAAAGATATTCAAACTTGCAGCTATTTTCTGCCATAACCAATGGTTCTCTGGGTTTATTGCATTTGTGCTTGGCCATTTGGATTTTAGAGAAGTTGAGGAAAAGCCACACTGTTTTCCCTCTTTTTTGGTGGTTGCCAGAACTTTTTCAAGGATTCAGATGGTTGTTGGTAGGCTTAAGTGTAAGCCTTCAGTTGAAACAACTTCCAAGATCATGGTTGTGGTTGTTTTCTCTTCTTACATTATTTCTTTCCTCAATTTTCTCTGTGTTATCCATGTCTTATGCAATTAGTAGCAGAGTATTGTCCTTCCAGGGAGCTTTATATGTTCTGTCTTTTCCAGCCGCAGTTTTACTACTCTTGTGCACTTATAAAGTGTATAAATGTGAAGACACTTATAGAGAAATTGATGAAGGCCTTTACGACCATTTAAATGACCACTATGATGAAGTTGATCCCGATGACCATGTCACCCCATTTGCCAAAGCTGGATTCTTTAATAGGATGTCGTTTTGGTGGTTGAATCCATTGATGAAAAGGGGCCAAGAGAAAATACTCCAGGATGAGGATATCCCAAAGTTGCAAGAATCAGATCGTGCAGAAAGTTGCTATTTGTTATTTTTAGAAAAAATGAACCGGAAAAAGGGAAAAGAATCATTATCACAGTCATCAGTTTTGTGGACAATAGTTTTGTGTCACAGGAGAGAGATTTTGATGACAGGATTCTTTGCATTGCTCAGGGTACTCACCTTGTCTACTGGTCCTGTACTTCTGAATGCTTTTATATTGGTTGCTGAGGGTAATGGAAGTTTCAAATATGAGGGTTATGTATTGGTCATATCACTATTCATTATAAAGAACATAGAGTCCCTATCACAAAGGCAGTGGTATTTCCGGAGCAGGCTTGTTGGAATGAAAGTTAGGTCACTACTTACAGCAGCCATTTATAAAAAACTATTGAGGTTGTCTAGTGCATCTAGATTGACACACTCTGGTGGTGAGATAATGAACTATGTGACTGTGGATGCTTATAGAATTGGAGAATTCCCCTATTGGTTTCACCAGTCGTGGACAACAAGCCTCCAAATTTGTATTGCATTGGTAATACTTTTTAATGCTATTGGGCTAGCCACAATTGCCTCATTGGTGGTGATAGTTCTCACTGTGCTTTGCAACACTCCACTAGCAAAGTTGCAGCATCAGTTTCAGAGTGACCTCATGGTGACACAAGATGAGAGATTGAAGGCCAGTTCGGAGGCTCTGACAAATATGAAAGTCCTGAAGCTCTATGCATGGGAAACCCATTTTAAAAATGCTATAGAAAGACTAAGAAATTTGGAACTGAAATTGTTACGTGCAGTGCAATTGAGAAAGGCATACAACATCTTTATATTTTGGACCTCGCCTATTTTGGTCTCTGCTGCCTCCTTTGGGACATGTTACTTCTTGAATATTCCTCTGCATGCAAATAATATTTTCACATTTGTGGCAACTATACGCCTTGTGCAGGAACCAATTACTGCCATCCCAGATGTTATTGGGGTGGTCATTCAAGCAAAAGTGGCATTTGCTCGGATTGTTAAATTCCTTGAGGCACCTGAATTGCAAAGTGCAAATTTCAGGAATAGAAGTTTTGATGACAGTACTGAAAGCCAAATCTCAATTAAATCTGCTGACTTTTCATGGGAAGATAATATATCAAAGTCAACACTGAGGAACATAAACTTGGAGATTAGATATGGGCAAAAGTTGGCTATTTGTGGAGAAGTTGGCTCTGGCAAATCAACTCTCTTGGCTACAATTCTCGGAGAGGTTCCTATGACAAAAGGATCGGTTGAAGTTTCTGGAAAGTTTGCATATGTTTCTCAAACAGCATGGATACAGACAGGAACCATAAGGGAAAATATTTTGTTTGGATCTGACTTGGATGATTATAGATATCAAGAAACACTTCGTAGATCTTCACTACTGAAAGATCTGGAGCTGTTTCCTTATGGAGATCTTACTGAAATAGGTGAGAGAGGAGTTAACTTGAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCACGTGCACTGTATCAGAATGCTGATGTATACCTCTTGGATGATCCATTCAGTGCAGTTGATGCACATACGGCCACAAATTTGTTTAATGGCTTTGAAATTTTGCAGGAATATATCATGGAAGGTCTTAAAGAGAAAACTGTTTTACTTGTAACTCATCAAGTTGACTTTCTACCAGCATTTGATTGTATTTTGTTGATGTCAAATGGGGAAATCCTAGAAGCTGCTTCTTATCATCATTTATTGTCCTCAAGGCAAGAATTCCAAGATCTTGTTAATGCTCACAAGAAAACTGCTGGTTCAGATGATCCAAAGAATGTTACTTCTTCCAAGAGACACTCAACTTCTGCTAGAGAGATTACACAAGGTTTCGCAGATAAGATGTTCAAAGCAACAAATGGAAATCAGTTAATAAAGGAAGAAGAGAGAGAGATAGGAGACACAGGGTTGAAGCCTTACATGCAGTATTTGAATCAGAAAAAAGGCTATATATACTTCTTCGTGGCTTCTCTTTGTCACCTCTTATTTGTCATTTGCCAGATATTGCAAAACTCATGGATGGCTGCTTATGTTGATAATTCCCAAGTTAGCACATTGCGATTGATTGTAGTTTACTTCTTGATTGGGGCTGTTTCTACAATTTTCTTGTTGATCAGAACTCTACTTGTAGTTGCCTTGGGTATTCAATCATCAAAACATTTATTTTTAAAGTTAATGAATTCCCTTTTTCGTGCTCCAATGTCCTTTTTTGACGCTACACCAGTGGGAAGGATTCTTAGTAGGGTCTCATCAGATCTAAGTATTATGGATCTTGATGTCCCATTTATCATTGCTTATACTGTGGGAGGTACTACAAACTTCTATTCTAATCTTGTAGTTTTAACAATTATCACTTGGCAAATCTTGCTTGTCTCTGTACCGATGGTTTACATTGCAATACGCTTGCAGAGATACTATTTTTCCATTGCAAAAGAAGTGATGCGCATGAATGGTACAACAAAATCACTTGTAGCTAATCATGTAGCTGAAACAACTGCTGGAGTTGTGACAATAAGAGCCTTTGAGGAAGAAGATCGTTTCTTTGAGAAGAATCTTCGTCTAATTGATATCAATGCCAGTCCTTTCTTCCATAGTTTTGCCTCAAATGAGTGGCTGATCCAAAGATTAGAAATAATTAGTGCAATACTTCTTTCCTCCACAGCACTATGCATGGTTATGCTTCCAGCAGGGACTTTCAGCTCTGGATTCATTGGCATGGCTCTATCTTATGGCCTTTCACTAAATGCTCAGCTAGTATTTTCAATTCAAAGTCAATGCAACCTTGCAAATTACATAATCTCTGTAGAGAGGCTGAATCAATATATGCATATACCAAGTGAGGCCCAAGAAATAATAAAAGGAAATCGTCCTCCTTCCAATTGGCCTGTTGATGGTAAAGTAGAACTACTTAACTTGCAGGTACGATACAGGCCTGAAGGACCACTTATACTTCATGGAATCACATGCACATTCAAAGCAGGACACAAGATTGGAATTGTTGGGAGGACTGGAAGTGGGAAATCCACTCTTATAAGTACTATATTTCGACTTGTGGAGCCAGCAAATGGAAAAATTGTAGTTGATGGCATAGACATATGTTCTATTGGTCTTCATGATTTGAGGTCACGTTTTGGTGTTATTCCACAGGATCCTACCCTTTTTAATGGGACTGTTAGATATAATTTGGACCCTTTGTCTCAATACTCTGATCATGATATATGGGAGGTTCTTGGTAAGTGCCAGTTGAGAGAAGCTGTCCAAGAGAAAGAAGAGGGTCTAAACTCCTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAATTATTTTGTTTGGGGCGTGCACTTTTAAGGAGAAGTAAGATATTGGTGCTGGATGAAGCAACTGCATCAATTGACAATGCAACTGATTTGATTCTGCAGAAAACTATTAGGACTGAGTTTGCAAATTGTACAGTGATCACAGTTGCACACAGAATACCAACTGTGATGGATTGCACTATGGTTCTTTCAATCAGTGACGGAAAATTGGTTGAGTATGATGAACCAATGAGTTTGATGCAGAAAGAAGGATCACTATTCAATCAGTTGGTCAAGGAATACTGGTCTCATATTCAATCTGCAGAGTCACATTAATATGCAAAATGCATTTTTGCATATTGTTGTCTATCTTTCTATGGTCTTACCAGTAAGTCAATAAAGTGTGATAAGATTCATGGTTTTGAATGTGGTTAGCATCTTTGGATGCCTGAAAGGAATTGGAAGAATGCAATGAAACGGTGCCAGAGTCGTTGAATGTCCTGGATTAAGATTATATACCATACGAGCTACATTGAGAGACTTTGTGTTCTGTTAGTTTGCTAATAAAAAAAAAAATTTGAGAAATTGCCTTAGAAGGTGAGTCAAGTCCTTGACAAATGAAGCTGGTTTATAATAGTGAGAATTATGGGATTGTCATTGTAATAAAT 4735 0.385 MLVLILLAIILIQKSLFKPFRAQFPVERYSNLQLFSAITNGSLGLLHLCLAIWILEKLRKSHTVFPLFWWLPELFQGFRWLLVGLSVSLQLKQLPRSWLWLFSLLTLFLSSIFSVLSMSYAISSRVLSFQGALYVLSFPAAVLLLLCTYKVYKCEDTYREIDEGLYDHLNDHYDEVDPDDHVTPFAKAGFFNRMSFWWLNPLMKRGQEKILQDEDIPKLQESDRAESCYLLFLEKMNRKKGKESLSQSSVLWTIVLCHRREILMTGFFALLRVLTLSTGPVLLNAFILVAEGNGSFKYEGYVLVISLFIIKNIESLSQRQWYFRSRLVGMKVRSLLTAAIYKKLLRLSSASRLTHSGGEIMNYVTVDAYRIGEFPYWFHQSWTTSLQICIALVILFNAIGLATIASLVVIVLTVLCNTPLAKLQHQFQSDLMVTQDERLKASSEALTNMKVLKLYAWETHFKNAIERLRNLELKLLRAVQLRKAYNIFIFWTSPILVSAASFGTCYFLNIPLHANNIFTFVATIRLVQEPITAIPDVIGVVIQAKVAFARIVKFLEAPELQSANFRNRSFDDSTESQISIKSADFSWEDNISKSTLRNINLEIRYGQKLAICGEVGSGKSTLLATILGEVPMTKGSVEVSGKFAYVSQTAWIQTGTIRENILFGSDLDDYRYQETLRRSSLLKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADVYLLDDPFSAVDAHTATNLFNGFEILQEYIMEGLKEKTVLLVTHQVDFLPAFDCILLMSNGEILEAASYHHLLSSRQEFQDLVNAHKKTAGSDDPKNVTSSKRHSTSAREITQGFADKMFKATNGNQLIKEEEREIGDTGLKPYMQYLNQKKGYIYFFVASLCHLLFVICQILQNSWMAAYVDNSQVSTLRLIVVYFLIGAVSTIFLLIRTLLVVALGIQSSKHLFLKLMNSLFRAPMSFFDATPVGRILSRVSSDLSIMDLDVPFIIAYTVGGTTNFYSNLVVLTIITWQILLVSVPMVYIAIRLQRYYFSIAKEVMRMNGTTKSLVANHVAETTAGVVTIRAFEEEDRFFEKNLRLIDINASPFFHSFASNEWLIQRLEIISAILLSSTALCMVMLPAGTFSSGFIGMALSYGLSLNAQLVFSIQSQCNLANYIISVERLNQYMHIPSEAQEIIKGNRPPSNWPVDGKVELLNLQVRYRPEGPLILHGITCTFKAGHKIGIVGRTGSGKSTLISTIFRLVEPANGKIVVDGIDICSIGLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQYSDHDIWEVLGKCQLREAVQEKEEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSKILVLDEATASIDNATDLILQKTIRTEFANCTVITVAHRIPTVMDCTMVLSISDGKLVEYDEPMSLMQKEGSLFNQLVKEYWSHIQSAESH 1439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01066 1439 Gene3D ABC transporter type 1, transmembrane domain 250 552 IPR036640 GO:0005524|GO:0016020
Pste9g01066 1439 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 880 1156 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01066 1439 FunFam ABC transporter C family member 5 566 815 - -
Pste9g01066 1439 Pfam ABC transporter 1210 1358 IPR003439 GO:0005524
Pste9g01066 1439 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 186 1427 - -
Pste9g01066 1439 CDD ABCC_MRP_domain1 578 784 - -
Pste9g01066 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1183 1424 IPR027417 -
Pste9g01066 1439 SUPERFAMILY ABC transporter transmembrane region 251 559 IPR036640 GO:0005524|GO:0016020
Pste9g01066 1439 CDD ABCC_MRP_domain2 1191 1411 - -
Pste9g01066 1439 MobiDBLite consensus disorder prediction 809 829 - -
Pste9g01066 1439 FunFam ABC transporter C family member 10 246 559 - -
Pste9g01066 1439 Pfam ABC transporter 596 730 IPR003439 GO:0005524
Pste9g01066 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 574 807 IPR027417 -
Pste9g01066 1439 CDD ABC_6TM_ABCC_D1 265 551 IPR044746 GO:0140359
Pste9g01066 1439 ProSitePatterns ABC transporters family signature. 703 717 IPR017871 GO:0005524|GO:0016887
Pste9g01066 1439 Pfam ABC transporter transmembrane region 877 1132 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01066 1439 Pfam ABC transporter transmembrane region 263 529 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01066 1439 Gene3D ABC transporter type 1, transmembrane domain 841 1175 IPR036640 GO:0005524|GO:0016020
Pste9g01066 1439 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 580 807 IPR003439 GO:0005524
Pste9g01066 1439 Gene3D - 1177 1428 IPR027417 -
Pste9g01066 1439 FunFam ABC transporter C family member 5 842 1174 - -
Pste9g01066 1439 CDD ABC_6TM_ABCC_D2 879 1168 IPR044726 GO:0140359
Pste9g01066 1439 Gene3D - 553 832 IPR027417 -
Pste9g01066 1439 SMART AAA_5 1219 1411 IPR003593 GO:0016887
Pste9g01066 1439 SMART AAA_5 605 784 IPR003593 GO:0016887
Pste9g01066 1439 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1193 1427 IPR003439 GO:0005524
Pste9g01066 1439 SUPERFAMILY ABC transporter transmembrane region 866 1173 IPR036640 GO:0005524|GO:0016020
Pste9g01066 1439 FunFam ABC transporter C family member 3 1176 1428 - -
Pste9g01066 1439 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 263 543 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01066 Pste-Chr9 7621292 7627710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01066 427 800 Calmodulin-binding Proteins AT2G36910 25.971 2.73e-26 115