Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01065 ATGGTGGCACAGGATGAGAGATTGAAGGCCAGTTCTGAGGCACTGGTGAATATGAAAGTGCTAAAGCTATATGCATGGGCAACCCATTTTAAAAATGCTGTAGAAAGATTAAGAAATTCGGAACTAAAATTGCTAGGTGCAGTGCAATTGAGAAAGGCATACAACATCATTTTATTTTGGAGCTCACCTGTTTTGGTCTCTGCTGCTTCTTTTGGAGCATGTTACTTCTTGAAAATTCCTTTACACGCAAACAATGTTTTCACTTTTGTGGCAACATTGCGCCTTGTGCAAGAACCTGGTACAGCCATTCCAGATGTTGTTGGGGTGGTCATTCAAGCAAAAATAGCATTTGCTCGGATTTTTAAATTCCTTGAGGCACCAGAATTGCATAGTGCGAATTTCAGGAGTAGGTGTTTTGATGACAGTATTAGAGACTTAATTTCAATAAAATCTGCTGAGTTTTCATGGGAAGGTAATGTATCAAAGTCAACATTGAGGAACATAAACTTGAATATCAGACATGGTCAAAAGTTGGCTATTTGTGGAGAAGTTGGCTCGGGCAAATCAACCCTCTTAGCAACAATTCTCGGAGAAGTTCCAATGACTAAGGGAACTATGAAAGTTTTTGGGAAGTTTGCGTATGTTTGTCAAACAGCGTGGATACAAACTGGTACAATACAGGAGAATATTTTGTTTGGATCTGATTTGGATGCTAATAGGTATCAAGAAACACTTCGTAGATCTTCACTACTGAAGGACTTGGAGCTGTTTCCCCATGGAGACCTCACTGAAATAGGTGAGAGAGGAGTTAACTTGAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCACGTGCACTGTATCAGAATGCTGATGAATACATCATAGATGGTCTTAAAGGGAAAACTGTTTTACTCATAACGCATCAAGTTGACTTTCTACCGGCGTTTGATTCTGTTTTGTTGATGTCAAAGGGAGAAATCCTAGAAGCTGGTTCTTATCATCATTTGTTGACCTCAAGTCTAGAATTCCAACATCTTGTTAATGCTCACAAGGAAACTGTAGGTTCTAACAATCCTATGAATGTTACATCTTCCCATAGACATGCAACTTCTGCTAGAGAGATTACACAAGCTTTCATGGAGAAGACGTTCAAAACCACTAATGGGAATCGGCTAATAAAGCAAGAAGAGAGAGAAATAGGAGACACGGGGTTGAAGTCTTACTTACAGTATTTGAATCAAATGAAAGGCTATATATACTTTTTTGTGGCTTCTCTTAGTCACCTCATGTTTGTCATTTGCCAGATATTGCAAAACTCATGGATGGCTGCTAATGTTGACAATTCACGAGTCAGCACATTGCAGTTGATTGTAGTTTACTTCTTCATTGGGGCTATTTCTACAATCTTCTTGTGCACCAGAACTCTACTTGTAGTTGCCTTGGGCATTCAATCATCAAGACATTTATTTTTACAGTTAATAAACTCCCTTTTTCGTGCACCAATGTCCTTTTATGACTCTACACCATTGGGAAGAATACTTAGTAGGGTCTCATCAGATCTAAGCATTGCGGATCTTGATTTACCATTTATCCTAAGTTTCAATGTGGTAGGTGCTATATTCTTTTATTCAAATCTCACAGTTCTAGCATTTGTCGCTTGGCAAGTCTTGGTTGTCTCCATACCGATGGTTTATGTTGCAATTCGCTTTCAGGTAATATGCAAATTCTTCTTTGAAAATATCCATAGATATTATTTTTCCACTGCAAAGGAAGTGATGCGGTTGAATGGCACAACAAAATCCTTTGTAGCTAATCATGTGGCTGAAACTACAGCTGGAGTTGTGACAATAAGAGCCTTTGAGGAAGAAAATCGTTTCCTTGAGAAGAATCTTAATCTAATTGACATAAATGCTAGTCCTTTCTTCCATAGTTTTGCCTCAAATGAGTGGCTGATCCAGAAATTAGAAATAGTTAGTGCAGTAGTTCTTGCCTCCACAGCTCTATGCTTGGTCATGCTTCCACCAGGGACTTTCAGCTCTGGATTTGTTGGCATGGCTCTCTCTTATGGCTTTACCCTAAACGCTTCCTTAGTATTTCTAATTCAAAATCAATGCAGCCTTGAAAATTACATAATATCTGTAGAGAGGCTAAATCAATATATGCATATACCAAGTGAGGCCGAAGAAGTAATAGAAGGAAATCGTCCTCCTTCAAATTGGCCAGTTGCTGGTAAAGTAGAACTAAATGACTTGCAGATACGATATAGGCCTGATGGACCACTTGTACTCCATGGGATCACGTGCACATTCAAAGCAGGGCACAAGATTGGAATTGTTGGCAGGGCAGGAAGTGGGAAATCAACTCTTATTGGTGCTTTATTTCGTCTTGTGAAGCCAGCAGGTGGAAAAATTGTAGTTGATGGCATAGACATATTTTCTATTGGCCTTCATGATTTGAGATCACGTTTTGGTGTTATACCTCAGGATCCTACCCTTTTTAATGGGACTGTTAGATATAATTTGGACCCTTTGTCTCAATACTCTGATCATGCTATATGGGAGGTTCTTGGGAAGTGTCAGCTGAGAGAAGCTGTCCAAGAGAAAGAAGAGGGTCTAAACTCCTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAACGGCAGTTATTTTGTTTGGGGCGTGCTCTTTTAAGGAGAAGTAGGATATTAGTGCTGGATGAAGCAACTGCATCAATTGACAATGCAACTGATTTGATTCTGCAGAAAACCATTAGGACCGAATTTGCAGATTGGATACTTGTATTGACAGGAAAACTGGTGGAGTATGATGATCCAATGAACTTGATGGAGAAAGAAGGATCACTATTCAAGCAGCTTGTCAAGTAA 2889 0.3956 MVAQDERLKASSEALVNMKVLKLYAWATHFKNAVERLRNSELKLLGAVQLRKAYNIILFWSSPVLVSAASFGACYFLKIPLHANNVFTFVATLRLVQEPGTAIPDVVGVVIQAKIAFARIFKFLEAPELHSANFRSRCFDDSIRDLISIKSAEFSWEGNVSKSTLRNINLNIRHGQKLAICGEVGSGKSTLLATILGEVPMTKGTMKVFGKFAYVCQTAWIQTGTIQENILFGSDLDANRYQETLRRSSLLKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADEYIIDGLKGKTVLLITHQVDFLPAFDSVLLMSKGEILEAGSYHHLLTSSLEFQHLVNAHKETVGSNNPMNVTSSHRHATSAREITQAFMEKTFKTTNGNRLIKQEEREIGDTGLKSYLQYLNQMKGYIYFFVASLSHLMFVICQILQNSWMAANVDNSRVSTLQLIVVYFFIGAISTIFLCTRTLLVVALGIQSSRHLFLQLINSLFRAPMSFYDSTPLGRILSRVSSDLSIADLDLPFILSFNVVGAIFFYSNLTVLAFVAWQVLVVSIPMVYVAIRFQVICKFFFENIHRYYFSTAKEVMRLNGTTKSFVANHVAETTAGVVTIRAFEEENRFLEKNLNLIDINASPFFHSFASNEWLIQKLEIVSAVVLASTALCLVMLPPGTFSSGFVGMALSYGFTLNASLVFLIQNQCSLENYIISVERLNQYMHIPSEAEEVIEGNRPPSNWPVAGKVELNDLQIRYRPDGPLVLHGITCTFKAGHKIGIVGRAGSGKSTLIGALFRLVKPAGGKIVVDGIDIFSIGLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQYSDHAIWEVLGKCQLREAVQEKEEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADWILVLTGKLVEYDDPMNLMEKEGSLFKQLVK 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01065 962 ProSitePatterns ABC transporters family signature. 272 286 IPR017871 GO:0005524|GO:0016887
Pste9g01065 962 SUPERFAMILY ABC transporter transmembrane region 420 726 IPR036640 GO:0005524|GO:0016020
Pste9g01065 962 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 149 349 IPR003439 GO:0005524
Pste9g01065 962 FunFam ABC transporter C family member 5 384 727 - -
Pste9g01065 962 Pfam ABC transporter 165 296 IPR003439 GO:0005524
Pste9g01065 962 Coils Coil 617 637 - -
Pste9g01065 962 Gene3D - 135 372 IPR027417 -
Pste9g01065 962 Gene3D ABC transporter type 1, transmembrane domain 383 728 IPR036640 GO:0005524|GO:0016020
Pste9g01065 962 Gene3D ABC transporter type 1, transmembrane domain 1 133 IPR036640 GO:0005524|GO:0016020
Pste9g01065 962 CDD ABCC_MRP_domain1 147 326 - -
Pste9g01065 962 Pfam ABC transporter 763 911 IPR003439 GO:0005524
Pste9g01065 962 Gene3D - 729 962 IPR027417 -
Pste9g01065 962 CDD ABCC_MRP_domain2 744 946 - -
Pste9g01065 962 CDD ABC_6TM_ABCC_D2 417 721 IPR044726 GO:0140359
Pste9g01065 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 348 IPR027417 -
Pste9g01065 962 SMART AAA_5 772 946 IPR003593 GO:0016887
Pste9g01065 962 SMART AAA_5 174 326 IPR003593 GO:0016887
Pste9g01065 962 FunFam Multidrug resistance-associated protein member 4 730 962 - -
Pste9g01065 962 SUPERFAMILY ABC transporter transmembrane region 3 128 IPR036640 GO:0005524|GO:0016020
Pste9g01065 962 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 112 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01065 962 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 936 - -
Pste9g01065 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 736 955 IPR027417 -
Pste9g01065 962 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 422 709 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01065 962 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 746 962 IPR003439 GO:0005524
Pste9g01065 962 Pfam ABC transporter transmembrane region 419 670 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01065 Pste-Chr9 7609501 7614321 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01065 737 925 Calmodulin-binding Proteins AT2G36910 30.808 1.78e-22 102