Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01063 AGAATGTTTCGTGGGGAATCTGATTTCAAGTTTTTGAAAGACCCTTCTACATGCACCAATCAGTTCTTGATTGTTTCCTTTGATGCAATACTACTGATTTCGCTGGCATTCATTTTGATCCAGAAGAAGAAATCTTTAAGGCTTTGGGTCGGAAACCTATTTTCTGCTATAACCAATGGTTCTCTGGGGTTGTTGCATTTGTTCTTGGGCATTTGGGTGTTAGAGGAGAAGATAAGGAAAAACCACACTAACTTTTTCAACATGGTTGTCAGTAGGCTTAAGTGTAAGTCTTCAGTTGAAACAACTTCCAAGACCATGGTTGTGGTTGTTTTCTCTTCTCACGATATTTGTTTCCACTATTTTCTAGTATTGTCCTTCAAGGGAGCTTTATATGTTCTGTCTTTTTCAGCCGCATGTATAAATGTGAAGACACGGAGAAAGAAATTGACGGAGACCTTTAAGACCCTTGATCGCAATGACCATGTTACCCCATTTGCCAAAGCTGGATTCTTTAATAGGATTTCTTTTTGGTGGTTGAATTCGTTGATGAAAAGGGGCCAAGAGAAAACACTTCAGGATGAAAATATCCCAAAGTTGCAAGAATCAGATCGTGCAGAAAGGTGCTATTTGTCAATTTTAGAACAACTGAACAGAAAACATGGAAAAGATCCATTATCAAAGTCATTAGTTTTGTGGACAATAGTTTTGTGTCACAGAAGAGAGATTTTGATGACAGGATTATTTGCATTGCTCAGGGTACTCACCTTGTGTACTGGGCCTGTACTTCTGAATGCTTTTATATTGGTTGCTGAGGGTAATGGAAGTTTCAAATATGAGGGTTACGTATTGGTCATATCACTATTTGTTATAAAGGTCATAGAGTCCACATCACAAAGGCAGTGGAATTTCCACAATAGGGTTGTTGGAATGAAACTCTTGATGTTGTCTACTGCAGCTAGATTAACACACTCTGGTGGTGAGATAATGAACTATGTGACTGTGGATGCTTACAGAATTGGAGAATTTCCATATTGGTTTCATCAGTCATGGACCACATGCCTCCAAATATGTATTTCATTGGTAATACTTTTTCATGCTATTGGGCTAGCAACAATTGCCTCATTGGTGATGATAGTTCTCACTGTACTTTGCAACATTCCACTAGCAAAGTTGCAGCATAAGTTTCAGAGTGAACTCATGGCGGCACAAGATGAGAGATTGAAAGCCAGTTCCGAGGCTTTGACTAATATGAAAGTCCTGAAGCCCTATGCATGGGAAACCCATTTTAGAAATGCCATAGAAAGACTAAGAAATTTGGAACTGAAATTCTTATGTGCAGTGCAACTGAGAAAGGCATACGACATCTTTTTATTTTGGAGCTCACCTGTTTTGGAGCCAATTATTGGCATCCCAGATGTTGTTGGGGTGATCATTCAAGCAAAAGTGGCATTTGCTCGTATTGTTAAATTCCTTGAGGCACCTGAATTGCAAAGTGCAAATTTCAGGAATAGAATATTAAAAAAAAAATCAATTAAATCTGCTGACTTTTCATGGGATGGTAATATTGAAGTTTCTGGAAAGTTTGCATATGTTTCTCAAACAGCTTGGATACAAACAGGAACTATAAGGGAAAATATTTTGTTTGGATCTGATTTGGATGCTCATATAGATATGAAGAAACACTTCGTGAGAGGAGTTAACTTGACTGTAGGTCAGAAGCAGCGAATTCAACTCGCACGTGCACTGTATCAAAATGCTGATCTATATCTCTTGGATGATCCATTTAGTGCAGTTGATGCACGTACGGCCGCAAATGTGTTTAATGGCTTTGGAACTTTGCATGAATATATGATGGAAGGTCTTAAGGAGAAAACTGTTTTACTTGTAACTCATCAAGTTGACTTTCTACCCGAATTTGACTCTGTTTTGTTAATGCTCAGAAGAAAACTGCTGGTTCTGACAATCCCAGGAATGTTCCATCTTCCAAGAGACACTCAACTTCTAGCTAGAGATATTACACAAGGTTTCATGGATAAGAAGTTGAAAGCAACAAATGATGATAAGAAGTTGAGTAGATACTATTTTTCCATTGCAAAAGAAGTGATGCTCATGAATGGCACAACAAAATCATTTGTCGCTAATCATGTAGCTGAAACAACTGCTGGAGTTGGTTTATTGACATGGCTCTATCTTATGGCCTTACTTAATGGTCAGCTAGTATTTTCAATCCAATGTCAATGCAATCTTGCAAATTACTTAATCTCTGTAGAGAGGCTGAATCAATATATGCATGTACCAAGTGAGGCCCAAGAAATAATAGAAGGAAATCGTCCTCCTTCCAATTGGCCAGTTTCTTCTAAAGTAGAACTACATAACTTGCAGATACGATACAGGCCTGAAGGACGACTTCTACAGCATGGAATCACATGCACTTTCAAAGCAGGACATAAGATTGAAATTGTTGGGAGGACCGGTAGTGGGAAATCCACTCTTATAAGTGCTTTATTTCGACTTGTGGAACCAGCAAATGGAAAAATTGTAGTCGATGGCATAGACATATATGCTATTGGCCTTCATGACTTGAGGTCACGGTTTGGTGTTATACCGCAGGATCCTACCCTTTTTAATGGGACTGTTAGATATAATTTGGACCCTTTATCTCAATACTCTGATCATGCTATATGGGAGGTTCTTGGCAAGTGCCAGTTGAGAGAAGTTGTCCAAGAGAAAGAAGAGGGTCTAAACTCCTCAGTTGTGGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAGTTATTTTGTTTGGGGCCTGCACTTTTAAGGAGAAGTAAGATATTGGTGCTGGATGAGGCAACTGCATCAATTGATAATCCAACTTATTTAATTCTGCAGAAAACCATTAGGACTGAGTTTGCAGATTGTACAGCGATCACAGTTGCACATAGAATACTAACTGCTATGGCTTGCATTATGGTTCTTTCAATCAGTGATGGAAAATTGGTTGAGTATGATGAGCCGATGAGTTTAATGCAGAAAGAAGGGTCACTATTCAATCAGCTGGTCAAGGAATACTGGTCTCATTTTCAATCTGCAGAATCACATTAA 3105 0.3878 RMFRGESDFKFLKDPSTCTNQFLIVSFDAILLISLAFILIQKKKSLRLWVGNLFSAITNGSLGLLHLFLGIWVLEEKIRKNHTNFFNMVVSRLKCKSSVETTSKTMVVVVFSSHDICFHYFLVLSFKGALYVLSFSAACINVKTRRKKLTETFKTLDRNDHVTPFAKAGFFNRISFWWLNSLMKRGQEKTLQDENIPKLQESDRAERCYLSILEQLNRKHGKDPLSKSLVLWTIVLCHRREILMTGLFALLRVLTLCTGPVLLNAFILVAEGNGSFKYEGYVLVISLFVIKVIESTSQRQWNFHNRVVGMKLLMLSTAARLTHSGGEIMNYVTVDAYRIGEFPYWFHQSWTTCLQICISLVILFHAIGLATIASLVMIVLTVLCNIPLAKLQHKFQSELMAAQDERLKASSEALTNMKVLKPYAWETHFRNAIERLRNLELKFLCAVQLRKAYDIFLFWSSPVLEPIIGIPDVVGVIIQAKVAFARIVKFLEAPELQSANFRNRILKKKSIKSADFSWDGNIEVSGKFAYVSQTAWIQTGTIRENILFGSDLDAHIDMKKHFVRGVNLTVGQKQRIQLARALYQNADLYLLDDPFSAVDARTAANVFNGFGTLHEYMMEGLKEKTVLLVTHQVDFLPEFDSVLLMLRRKLLVLTIPGMFHLPRDTQLLARDITQGFMDKKLKATNDDKKLSRYYFSIAKEVMLMNGTTKSFVANHVAETTAGVGLLTWLYLMALLNGQLVFSIQCQCNLANYLISVERLNQYMHVPSEAQEIIEGNRPPSNWPVSSKVELHNLQIRYRPEGRLLQHGITCTFKAGHKIEIVGRTGSGKSTLISALFRLVEPANGKIVVDGIDIYAIGLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQYSDHAIWEVLGKCQLREVVQEKEEGLNSSVVEDGSNWSMGQRQLFCLGPALLRRSKILVLDEATASIDNPTYLILQKTIRTEFADCTAITVAHRILTAMACIMVLSISDGKLVEYDEPMSLMQKEGSLFNQLVKEYWSHFQSAESH 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01063 1034 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 436 672 IPR003439 GO:0005524
Pste9g01063 1034 Gene3D - 509 654 IPR027417 -
Pste9g01063 1034 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 311 442 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01063 1034 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 732 1022 - -
Pste9g01063 1034 FunFam Multidrug resistance-associated protein member 4 772 1024 - -
Pste9g01063 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 521 645 IPR027417 -
Pste9g01063 1034 SMART AAA_5 814 997 IPR003593 GO:0016887
Pste9g01063 1034 CDD ABCC_MRP_domain2 787 1006 - -
Pste9g01063 1034 Pfam ABC transporter 807 953 IPR003439 GO:0005524
Pste9g01063 1034 Gene3D ABC transporter type 1, transmembrane domain 214 496 IPR036640 GO:0005524|GO:0016020
Pste9g01063 1034 SUPERFAMILY ABC transporter transmembrane region 231 449 IPR036640 GO:0005524|GO:0016020
Pste9g01063 1034 CDD ABC_6TM_ABCC_D1 245 487 IPR044746 GO:0140359
Pste9g01063 1034 Pfam ABC transporter 559 595 IPR003439 GO:0005524
Pste9g01063 1034 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 788 1022 IPR003439 GO:0005524
Pste9g01063 1034 Pfam ABC transporter transmembrane region 311 442 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01063 1034 FunFam ABC transporter C family member 10 226 465 - -
Pste9g01063 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 778 1019 IPR027417 -
Pste9g01063 1034 Gene3D - 772 1023 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01063 Pste-Chr9 7586381 7597638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01063 527 645 Calmodulin-binding Proteins AT2G36910 28.571 7.95e-06 48.1