Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01062 AATGGTTTCGTAATAATGACTTAATTTTTTGGTCCTTTATGCCAGAAGTTGAGCAGCAAAGAGAACTTGCAATGATGAAGGATCTTCCCAGCATGTTTTGTGGGGAATCTGATTTAAAGTTTTTGAAAGACCGTTCTACATGTACCAACCAGTTCTTGATTGTATGCTCTGATGTAGTACTGCTGATCCTGCTGGCATTCATTTTGATCCAGAAATCTTTGTTCAGATCATTTCAGGGTCAGTTTTGGGTGGGAAGATATTCAAAATTGCAGCTATTTTCAGCCATAACCAATGGTTTTCTGGGGTTGTTGCATTTGTTCTGGGGCATTTGGGTGTTAGAGGAGAAGTTAAGGAAAAGCCACACTGTTTTTCCTCTTTATTGGTGGTTGCCAGAACTTTTTGAAGGAGTCAGATGGTTGTCAGTAGGCTTAAGTGTAAGTCTTCAGTTGAAACAACTTCCAAGATCATGGTTGTGGTTGTTTTCTCTTCTAACATTATTTGTTTCCACTATTTTCTGTGATTTATCGACATCTAATTCAATTAGCAGCAGAGTATTATCCTTCAAGGGAGCTTTAGATGTTCTGTCTTTTTCAGCAGCAGTTTTACTACTCTTGTGCACTTACAAAGTGAATAAATGTCAAGACCCTGATAGAGAAATTGATGAAGGCCATTATCACCCTTTAAATGGCCACTTTAAAGAAGATGATCCTGATGTCAATGTTACATCATTCGCTGACGCTGGATTCCTTAGTAGGATGTCGTTTTGGTGGTTGAATCCATTGATGAAAAGGGGCCAAGAGAAAACACTTCAGGATGAGGACATCCCAAAGCTGCGAGAATCAGATCAAGCAGAAAGATGCTATCTGTTTTTTCTGGAGCAATTGAACACAAAGAAAAGAAATGAACCATTATCGCAGTCATCAATTTTGTGGGCAATTATTTTGTGCCACAGGAGAGAGATTTTGATGTCAGGATTTTTTGCATTGCTCAAGGTACTCACCGCGTCTACGGGTCCTTTACTTCTTAATGCTTTTATATTGGTTGCTGAGGATAATGGAAATTTCAAATATGAGGGTTATATGTTGGTCATATTACTATTCTTTATAAAGATCATAGAGTCTATATCAGAAAGGCAGTGGTATTTCCGCAGTAGGCTTATGGGGATGAAAGTTAGATCACTACTTATGGCAACCATTTATAAAAAAATATTGAGGTTGTCTAGTGCAGCTAGATTGACACACTCTGGTGGTGAGATAATGAACTTTGTGACTGTGGATGCTTATAGAATTGGAGAATTCCCCTATTGGTTTCACCAGTCGTGGACAACAAGCCTCCAAATAGTTATTGCATTGGTAATACTTTTTCATGCTATTGGGCTAGCAGCAATTGCCTCGTTGGTGGTGTTAGTTCTCACTGTGCTTTGCAACACTCCACTTGCAAAGTTGCAGCATAAGTTTATGAATGAACTCATGGCGGCACAAGATGAGAGATTGAAGGCTAGTTCTGAGGCTTTAACAAATATGAAAGTCCTTAAGCTCTATGCATGGGAAAGCCATTTTAAAAATACTATAGAAAGACTAAGAAATTTAGAACTGAAATTTTTAGGAGCAGTGCAATTGAGGAAGGCATACGACATCTTTTTATTTTGGATCTTACCTATTTTGGTCTCTGCTGCGTCGTTTGGAACATGTTATTTCTTGAATATTCTTTTGCATGCAAATAATATTTTCACATTTGTGGCAACCATACAACTTGTGCAGCAGCCCATTACTGACATCCCAGAGGCTGTTTGGGTGGTAATTCAAGCAAAAGTGGCATTTGCCCGTATTGTTAAATTCCTTGAGGCACCTGAATTGCAACGTACAAATTTCAGGAATATAAGTTTTAATAAAAGTATGAAAAGCCAAATTTCAATCAAATCTGCTGACTTTTCATGGGAAGGTAATGTATCAAAGTCAACATTGAGGAACATAAACTTGGAGATTAGACAAGGGCAAAAGTTTGCTGTTTCTGGAGAAGTTGGCTCAGGCAAATCAACCCTCTTGGCTACAATTCTTGGAGAGGTTCCTATGACAAAAGGAACTATTGAAGTTTCTGGAAAGTTTGCATATGTTTCTCAAACAGCTTGGATACAGACAGGAACTATAAGGGAAAATATTTTGTTTGGATCTGATTTGGATTCTCATAGATATCAAGAAACACTTCGTAGATCTTCACTACTTAAAGATCTGGAGCTGCTTCCTTATGGAGATCTCACTGAAATAGGTGAGAGAGGAATTAACTTGAGTGGAGGTCAGAAGCAGAGAATTCAACTTGCACGTGCCCTGTATCAAAATGCTGATGTATATCTCTTGGATGATCCATTCAGTGCAGTTGATGCACATACTGCCAAAAATTTGTTTAATGAATATTTCATGGAAGGTCTTAAAGAGAAAACTGTGTTACTTGTAACTCATCAAGTAGACTTTCTACCAGCATTTGATTCTGTTTTGTTGATGTCAAATGGGGAAATCCTAGAAGGTGCTCCTTATCATCATTTGTTATCCTCATGCCAAGAATTCCAAGATCTTGTTAATGCTCACAAGAAAACTGCTGGTTCTGACAATTATCCAATGAATATTACTTCTTCCAAGATACATTCAAGTTCTACTGGAGAGATTAATGCACAAGTTTTCATGGATAACAAGTTCATAGCAACAAATGGAAGTCAGTTAATAAAGGAAGAAGAGAGAGAGATAGGAGACACAGGGTTGAGGCCTTACAAGCAGTATATGAATCAGACAAAAGGCTATATTTACTTTTTTGTGGCCTCTATTTGTCACCTCTTGTTTATTATTTGCCAGATATTGCAAAACTTATGGATGGCCGCTAAAGTTGATAATTCCCAAGTCAGCACATTGCGATTGATTGTAGTTTACTTCTTCATTGGGGCTGTTTCTACAATTTTCATGTTGACTAGAACTCTACTTATAGTTGCCTTGGGTATTCAATCATCAAAACATTTATTTCTAAAGTTAATGAACTCCCTTTTTCGTGCTCCAATGTCCTTCTATGACTCTACACCGTTGGGAAGGATACTTAGTAGGGTCTCATCAGATTTAAGCATTATGGATCTTGATATCCCGTTTATCATTGCTTACACTGTGGGAGGTGCTATAAATTTCTATTCTTATCTCTCAGTTTTAGCAATTATCACTTGGCAAATCTTGCTTATCGCTATACCGATGGTTTACATTGCAACACGCTTGCAGAGATACTATTTTTCCATGGCAAAAGAAGTGATGCGCCTGAATGGTACAACAAAATCCTTTGTAGCTAATCATTTAGCTGAAACAACTGCTGGAGTTGTGACAATTAGAGCCTTTGAGAAAGAAGATCGTTTCTTTGAGAAGAATCTTGATTTAATTGACAACAATGCCAGTCCTTACTTCCATAGTTTTGCCTCAAATGAGTGGCTGATCCAAAGATTAGAAATAATTAGTGCAGTACTTCTTTCCACCACAGCACTGTGCATGGTTATACTTCCAGCAGGGACTTTCAGCTCTGGATTCATTGGCATGGCTCTATCTTACGGCCTTACACTAAATTCTCAGCTAGTATTTTCAATTCAAAGTCAATGCAACCTTGCAAATTACATAATCTCTGTAGAGAGGTTGAATCAATATATGCATGTACCAAGTGAGGCCGAGGAAATAATAGAAGGAAATCGTCCTCCTTCCAATTGGCCAGTTTCTGGTAAAGTAGAACTGTATAACTTGCAGATACGATACAGGCCTGAAGGACCACTTATACTACATGGAATCACATGCACATTCAAAGCAGGGCACAAGATTGGGATTGTTGGGAGGACAGGCAGCGGGAAATCCACTCTTATTAGTTCTTTATTTCGTCTTGTGGAGCCTACATGTGGAAACATTATAGTTGATGGCATAGACATATGTTCTATTGGCCTTCACGATTTGAGGTCACGTTTTGGTGTTATACCTCAGGATCCTACCCTTTTTAATGGGACTGTTAGATATAATTTGGACCCTTTGTCTCAATACTCTGATCATGCCATATGGGAGGTTCTTGGGAAGTGCCAGTTGAAAGAAGCTGTACAAGAGAAAGAACTGGGCCTAAACTCTTCAGATGGGGCAAACTGGAGCATGGGACAAAGACAATTGTTTTGTTTGGGGCGTGCGCTTTTAAGGAGAAGTAAGATATTGGTGCTGGATGAGGCAAGTGCATCAATTGACAATGCAACTGATTTGATTCTGCAGAAAACAATTAGGATTGAGTTAGCAGATTGTACAGTGATCACAGTGGCTCATAGAATACCAACCGTGATGGATTGCACTATGGTTCTTTCAATCAGTGATGGAAAATTAGTTGAGTATGATGAACCAACGAGTTTGATGCAGAAAGAAGGATCACTATTCAATCAGCTGGTCAAGGAATACTGGTCTCATTTTCAATCTGCAGAATCACATTAATATGCAAAATGGTTTTTTGCCTATTAGTCTATCTTGCTTTGGTACCAATAAATCAATAAAGTTACTGTGAGAAGATGCATGATTTTTTAATGTGTTTAGAAATTTTCCATCCCTGCCAGGGTTGGAAAGGAATTAGAAGAATAAGAGAAACTGATGTCTAATTGTTGCTTCGCCTTCATT 4655 0.3828 MPEVEQQRELAMMKDLPSMFCGESDLKFLKDRSTCTNQFLIVCSDVVLLILLAFILIQKSLFRSFQGQFWVGRYSKLQLFSAITNGFLGLLHLFWGIWVLEEKLRKSHTVFPLYWWLPELFEGVRWLSVGLSVSLQLKQLPRSWLWLFSLLTLFVSTIFCDLSTSNSISSRVLSFKGALDVLSFSAAVLLLLCTYKVNKCQDPDREIDEGHYHPLNGHFKEDDPDVNVTSFADAGFLSRMSFWWLNPLMKRGQEKTLQDEDIPKLRESDQAERCYLFFLEQLNTKKRNEPLSQSSILWAIILCHRREILMSGFFALLKVLTASTGPLLLNAFILVAEDNGNFKYEGYMLVILLFFIKIIESISERQWYFRSRLMGMKVRSLLMATIYKKILRLSSAARLTHSGGEIMNFVTVDAYRIGEFPYWFHQSWTTSLQIVIALVILFHAIGLAAIASLVVLVLTVLCNTPLAKLQHKFMNELMAAQDERLKASSEALTNMKVLKLYAWESHFKNTIERLRNLELKFLGAVQLRKAYDIFLFWILPILVSAASFGTCYFLNILLHANNIFTFVATIQLVQQPITDIPEAVWVVIQAKVAFARIVKFLEAPELQRTNFRNISFNKSMKSQISIKSADFSWEGNVSKSTLRNINLEIRQGQKFAVSGEVGSGKSTLLATILGEVPMTKGTIEVSGKFAYVSQTAWIQTGTIRENILFGSDLDSHRYQETLRRSSLLKDLELLPYGDLTEIGERGINLSGGQKQRIQLARALYQNADVYLLDDPFSAVDAHTAKNLFNEYFMEGLKEKTVLLVTHQVDFLPAFDSVLLMSNGEILEGAPYHHLLSSCQEFQDLVNAHKKTAGSDNYPMNITSSKIHSSSTGEINAQVFMDNKFIATNGSQLIKEEEREIGDTGLRPYKQYMNQTKGYIYFFVASICHLLFIICQILQNLWMAAKVDNSQVSTLRLIVVYFFIGAVSTIFMLTRTLLIVALGIQSSKHLFLKLMNSLFRAPMSFYDSTPLGRILSRVSSDLSIMDLDIPFIIAYTVGGAINFYSYLSVLAIITWQILLIAIPMVYIATRLQRYYFSMAKEVMRLNGTTKSFVANHLAETTAGVVTIRAFEKEDRFFEKNLDLIDNNASPYFHSFASNEWLIQRLEIISAVLLSTTALCMVILPAGTFSSGFIGMALSYGLTLNSQLVFSIQSQCNLANYIISVERLNQYMHVPSEAEEIIEGNRPPSNWPVSGKVELYNLQIRYRPEGPLILHGITCTFKAGHKIGIVGRTGSGKSTLISSLFRLVEPTCGNIIVDGIDICSIGLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQYSDHAIWEVLGKCQLKEAVQEKELGLNSSDGANWSMGQRQLFCLGRALLRRSKILVLDEASASIDNATDLILQKTIRIELADCTVITVAHRIPTVMDCTMVLSISDGKLVEYDEPTSLMQKEGSLFNQLVKEYWSHFQSAESH 1478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01062 1478 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Pste9g01062 1478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1225 1463 IPR027417 -
Pste9g01062 1478 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524|GO:0016887
Pste9g01062 1478 SUPERFAMILY ABC transporter transmembrane region 918 1215 IPR036640 GO:0005524|GO:0016020
Pste9g01062 1478 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 847 IPR003439 GO:0005524
Pste9g01062 1478 CDD ABC_6TM_ABCC_D1 311 597 IPR044746 GO:0140359
Pste9g01062 1478 Gene3D - 1219 1467 IPR027417 -
Pste9g01062 1478 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 922 1198 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01062 1478 SUPERFAMILY ABC transporter transmembrane region 297 602 IPR036640 GO:0005524|GO:0016020
Pste9g01062 1478 CDD ABCC_MRP_domain1 624 824 - -
Pste9g01062 1478 Gene3D ABC transporter type 1, transmembrane domain 884 1217 IPR036640 GO:0005524|GO:0016020
Pste9g01062 1478 Gene3D - 600 867 IPR027417 -
Pste9g01062 1478 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1235 1466 IPR003439 GO:0005524
Pste9g01062 1478 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 584 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01062 1478 FunFam ABC transporter C family member 10 608 860 - -
Pste9g01062 1478 CDD ABC_6TM_ABCC_D2 921 1210 IPR044726 GO:0140359
Pste9g01062 1478 FunFam ABC transporter C family member 5 885 1216 - -
Pste9g01062 1478 FunFam ABC transporter C family member 3 1218 1467 - -
Pste9g01062 1478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 847 IPR027417 -
Pste9g01062 1478 SMART AAA_5 1261 1450 IPR003593 GO:0016887
Pste9g01062 1478 SMART AAA_5 651 824 IPR003593 GO:0016887
Pste9g01062 1478 FunFam ABC transporter C family member 10 292 605 - -
Pste9g01062 1478 Pfam ABC transporter transmembrane region 919 1178 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01062 1478 Pfam ABC transporter transmembrane region 309 576 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01062 1478 CDD ABCC_MRP_domain2 1233 1450 - -
Pste9g01062 1478 Gene3D ABC transporter type 1, transmembrane domain 296 599 IPR036640 GO:0005524|GO:0016020
Pste9g01062 1478 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 232 1466 - -
Pste9g01062 1478 Pfam ABC transporter 1252 1396 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01062 Pste-Chr9 7565398 7573546 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01062 604 839 Calmodulin-binding Proteins AT2G36910 29.600 1.80e-23 106