Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01033 ATGTCTAGGAGTGGCACGGGAACTGGAAAAAATAACCCTTCGCACATAACAACCCCAGTAACAAGGGAACGGGGATTTTTCATCAATTCGCCAATCTCCGTGGCTTGTTCCTCCATCTTTTCAATTCAACAGCTATTGAATTTCAATAAAGCTTGGAACTTCTACAATTACGGAGTAATAGCTAAGAGGAAAAGGGATGAAGCACATTTGAGGAACATGGATGCACAAGCCAAGAAAAAAGCATTGTTTCGTTCTAAATTGAATGCTCAGAAAAAGGAAAAGCGCATAGAATCTCCCCTTGTGAGGTATAATGAATTTGATCAACCTGTTTGCCGGGTTTGTGATGTTGTTCTAAAGTCTGAGTCCTTATGGGATGCACACCAGGTTTCTCGTAAGCATCGTCAGGCAATAAGTAATCTGAAAGCTAATGCAGCTGGATCAACTAAGCATAACAATGCAAAGCCTGTTGCTGATACCAACCCTCCCAAGGCTAAATCAGAACATTCTTTGGACTCACAAATCAAACTGCCAGAAGTTTCGCGAGAAGTGTCCAAACCTCAATCATCATCTGTGCTTCCACCAGGGTTTTTTGATGACATTAATTCAGGAAAAACAAAATCTGAACATTTAGCGGACTCTGATTTAGGTAGAAAAGCTGGGGTTTCTGCTCAAGTGTTAAACTTGGAGAAGGAAAAAGGTCATTTTCATGACAATAATGCTGCCAAGTCAAATGTTAGCCAAGCTGCAATGGATAGTGGGCTGACATCAGTCAAGACTGATGATACAGAGACCAAGCAAGTAAAAGGGATTCTGCCTGAAGGATTTTTTGACAATAAGGAAGCTGATTTGCGTGCTCGTGGCATAAAGCCTGTTAAGCCAGATGTCAAAGACGAGTACAAGGAATTTGAGAAGTTGATTCAGGAAGACTTGAAGGATGTGGATGACCGATTGGAAGAAGAAGAGATTGATGCGGCTGAGATGATAGAAGAAGAAGAATTTGTAGAGCAAAAGATCCTTAGCGAGAAAGTGGAAATGTTGAAGAAGAGGAGATTGGAGCTAAAAGCTGCTAATGCTGCAAAGCGTGGTAAATCTTCTGAGGTTGTAGCCAAGGGGTCTAGACAAGAAGAGTCATCCAGTGATGATGAAAGTGAAGAGAATTTTGCTGTGAACTGGAGAGCACAACACTTGTGATTTGTTAATACCTTTCTAATTTTTTTCTTCTATTTCTTGAATTCCATGACTGGAATATAATATGTAATATCTACCCACAACATCAGGTTTTGTATGGACAATTTTATTTAC 1302 0.4025 MSRSGTGTGKNNPSHITTPVTRERGFFINSPISVACSSIFSIQQLLNFNKAWNFYNYGVIAKRKRDEAHLRNMDAQAKKKALFRSKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESLWDAHQVSRKHRQAISNLKANAAGSTKHNNAKPVADTNPPKAKSEHSLDSQIKLPEVSREVSKPQSSSVLPPGFFDDINSGKTKSEHLADSDLGRKAGVSAQVLNLEKEKGHFHDNNAAKSNVSQAAMDSGLTSVKTDDTETKQVKGILPEGFFDNKEADLRARGIKPVKPDVKDEYKEFEKLIQEDLKDVDDRLEEEEIDAAEMIEEEEFVEQKILSEKVEMLKKRRLELKAANAAKRGKSSEVVAKGSRQEESSSDDESEENFAVNWRAQHL 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01033 396 Coils Coil 303 337 - -
Pste9g01033 396 Pfam Zinc-finger of C2H2 type 111 133 - -
Pste9g01033 396 PANTHER UNCHARACTERIZED 73 396 IPR040050 GO:0003676|GO:0005681|GO:0008270
Pste9g01033 396 SUPERFAMILY beta-beta-alpha zinc fingers 106 141 IPR036236 -
Pste9g01033 396 Gene3D Classic Zinc Finger 104 142 - -
Pste9g01033 396 MobiDBLite consensus disorder prediction 357 396 - -
Pste9g01033 396 MobiDBLite consensus disorder prediction 143 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01033 Pste-Chr9 7111185 7116045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01033 73 396 C2H2 Transcription Factor Family AT3G02860 53.474 8.22e-90 272