Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01020 AGTCCAATGTTGGGAGACTTAAGAGTGCAAGGAACAAGAGGAGGTTCTATAGATTTAGTGTCAACAATTAATGGTGTTGTTCTTCCATTGGGAGGAGCTCATGATGGTCGTGTTGTTGTGGGAGGAGCCAACAATGGTGGTAGAGGATCAAATTTAGGGGACAATGAGAGAGGAAGGTGTGAGAAGTGTGACAATAGCTTTGGTGGGAACACGTGGCCAAGGCAAGAGACTTTGGCTTTGTTGAAGATACACTTAGATATGAACATGACTTTTAAAGATGCAAGTATAAGGAGTCCATTCTGGGAAGAGGCTTCCATGAAGTTGGTAAAGTTTGACTACTACCGTCATGCTAAAAAGTGCAAAGAGAAGTTTGAAAATGTTTATAAGAATACTCTAAGAGAACAAAGGAAAAGAAAAATTGGAAGATTAGAAGGTACAACTTATTGCTTCTTTGATCAATTGCAAGCCTTTGAAAACAATCCTAGAATCCATGCTATCCAACCCCTAACACCACCTTCAAAGCTACAAGCACGTCCACAAACAAGAATATTACCAAGATCACTAATGTCAACAACGATAAAACTAACACCATCACTAACAATGCCACTTTTCTCAATCATGACAATGTCATTTCCAACAATGTCTAATAACACTATTATTCCATCAATAACTACAATGTTTATGCCTCAAGGGATTTTCCATATAACACGACCATCAACATTTTGTGTTATAAACTATAAGTACCCATTATCAAAGCATATATACTTTCCAACACAAACATCTAACCATACTAGCAACAACAACCCTTTAAACCCTATCAACCCACCTTGTTTTCCTTACATCCCAATGAATGTGTTATCAAATTTGAGTTTTTGCTCCACTTCCTTGAATGAAACAACATTGGAGGGAAGGGTAAAAAGTGGTAAGAGAAAGATTAAGTGCAAATATGTCCTTGAGAGATTTTTGAAGGAGGTAATAGAGAAGCAACATGAGCAACAAAAGAGATTGAGGTTCTTGGAGACTATAGAGATAAAAGAACAAGAGTTTGTGATGAGAGAAGAAGCATGGAGAATGAACATGATGCAAATGATCACTAGGAAAAGTGATATTCCAACACTAGAAAGGCTCATTACAATTACAAAAGACCCTGCTTTGTTAAAACTTTTGCACAAGTTAATTAAACATCAACCACAAGAAATTAATCTTGAGCTAGCATTGAATAACAACAACAAAGACATCATTATAATTCCACAACAGCTAATGTCTCAAGCAATTAAAACACGAATATTACAACAAGGACAAACAACTATTCTTAAGGCCCCATTAGAGTTGTCTTTGACACCACAACCATATAAAAAACATCAAGTACAAAAACAAGTTGAGACTAATGTGGAAATTAACAAAGTTGACAATAATGGTGAGAATTTGATGATGGTTACAAGCTTGTCAAAGTGTCAAAAAATAGAGGTAGAAAAATTAATGTATATAAGAAGAAACATGGAAATAAAATACCAAGAGAATGGAATAAAAAGGCCACTGTGGAAGGAGATCCCAATGTTGATGAGGAAAATTATCTATAGTCAAAGTGCTAAAAAGTGCAAAGAGAAGTTGGAGAATGTCAACAAGTGCTTTAAGAAAAAGAAGGAAAGCAACAAGACAAGCCTAAAGTTTCCAAAACTTATCCCTATTTTCACCAATTGGATGCTTTGTAGAGGAAAAAAAACAAGGTAG 1731 0.3559 SPMLGDLRVQGTRGGSIDLVSTINGVVLPLGGAHDGRVVVGGANNGGRGSNLGDNERGRCEKCDNSFGGNTWPRQETLALLKIHLDMNMTFKDASIRSPFWEEASMKLVKFDYYRHAKKCKEKFENVYKNTLREQRKRKIGRLEGTTYCFFDQLQAFENNPRIHAIQPLTPPSKLQARPQTRILPRSLMSTTIKLTPSLTMPLFSIMTMSFPTMSNNTIIPSITTMFMPQGIFHITRPSTFCVINYKYPLSKHIYFPTQTSNHTSNNNPLNPINPPCFPYIPMNVLSNLSFCSTSLNETTLEGRVKSGKRKIKCKYVLERFLKEVIEKQHEQQKRLRFLETIEIKEQEFVMREEAWRMNMMQMITRKSDIPTLERLITITKDPALLKLLHKLIKHQPQEINLELALNNNNKDIIIIPQQLMSQAIKTRILQQGQTTILKAPLELSLTPQPYKKHQVQKQVETNVEINKVDNNGENLMMVTSLSKCQKIEVEKLMYIRRNMEIKYQENGIKRPLWKEIPMLMRKIIYSQSAKKCKEKLENVNKCFKKKKESNKTSLKFPKLIPIFTNWMLCRGKKTR 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01020 576 Gene3D - 486 546 - -
Pste9g01020 576 Gene3D - 72 131 - -
Pste9g01020 576 Pfam Myb/SANT-like DNA-binding domain 489 553 IPR044822 -
Pste9g01020 576 Pfam Myb/SANT-like DNA-binding domain 70 156 IPR044822 -
Pste9g01020 576 FunFam Trihelix transcription factor GT-2 72 133 - -
Pste9g01020 576 PANTHER FI21293P1 50 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01020 Pste-Chr9 6891837 6895132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01020 68 564 Trihelix Transcription Factor Family AT1G76890 35.742 1.42e-64 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste9g01020 Myb_DNA-bind_4 1.8e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01020 9 6891837 6895132 Pste9g01020 9 6891837 6895132 ECH
Pste9g01020 9 6891837 6895132 Pste4g02620 4 18512622 18516242 PCT