Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01019 ATTTTTTCCTCCTCCGTAATTGTCAAGTGTTTTTGAAGAGAGAGGTAGATAGAGACCACAGAAAAGAGAGAGAGAGAGAGAGAAAGTAGAGAGAGTCCTATGCTGGGGGACTCAGCAGTGCTGGGAACAGGAGGAGGAGGAGGCTCAGCTGATACAGTGGCTGCAACAGTTAGTGCTGCAGCTCATGACGGTGGTGCTGACATGGCAGGTGGCGGCGGTGACGGTGGCGGCGGAGGATCGAATTCTGGGGATGATGAGAGGGGAAGAGGTGAGGAAGGTGACAAGAGCTTTGGTGGGAACAGGTGGCCCAGACAAGAGACTTTGGCTTTGTTGAAAATAAGGTCTGATATGGATGCAGCTTTTAGAGATGCAAGTGTGAAGGGTCCTTTGTGGGAAGAGGTTTCTAGGAAGCTGGCAGAGCTTGGGTACCACAGAAATGCCAAGAAGTGCAAAGAAAAGTTTGAGAACGTCTACAAGTACCATAAAAGAACCAAGGAAGGGCGAAGTGGGAAATCAGAAGGGAAAACTTATCGTTTCTTTGATCAATTACAAGCCCTTGAAAGCAATCCTGTGAACCATGGTATCCAATCTCCACCTTCAATGTCACAAACAATAGCACTACCAGCAACACCAGTGTCAATAGTGGTAACAACTACACCATCATCAATAATGTCTTCATTTCCCCCAACCACAACAATGTCATTGCCACCGGTTTCTAATAACACCACCACCACCACCACAGTTCCGTCAGCAACCACACCCTCTATGCCTCAAGCCATTCTGAACATAACACCACCATCAACACTTAACATCACAACCCCTTCTTACCCTTCATCAAATCCTTCATATTTTCCAACACAAACACCAAACCCTACTAGTAACAACAACACCAACAACCCTCCAAACACTATCAACCCTCCTTCATTCCCCAACATCCCCAGAGATCTCTTGTCAAATTCGAGTTCTTCCTCGACTTCCTCGGAGGAAACAACAGTGGAGGGAGGGGGAACGAGACGCAAAAGGAAAAGGAAGTGGAAGGACTTCTTTGAGAAACTAATGAAGGAGGTGATAGAGAAACAGGAGGAGCTACAAAGGAGGTTCTTGGAAGCCATAGAGAAAAGAGAACAAGAGCGAGTGGTGAGAGAAGAAGCATGGAGAATGAAAGAGGTGCAAAGGATCAATAGGGAAAGAGAAATTCTTGCACAAGAAAGGTCCATTGCTGCAGCAAAAGACGCAGCTGTGATGTCATTTTTGCAAAAGATAGCCGATCATCAACAACAAGAAATTAATCTTGAGCCAGCATTGAATAACAACAACAACAGCAGTGTTGCTTTGCAACAACCTGTGCCTCAAGGAACTACAAAGCCAATACCCTCACCAACCCCAACACAACAACAAGCACAAATGACTATTGTTGAGGCCCCACCAGTTCAACCATCCTTGGCTCTACAACAACAGCAACAACAAGTGGTGACTGATGCAGAAATCAGTAAAGCTGATAATAATGGTGAGAATTTGATGATGGGGCCAAGCTCTTCAAGGTGGCCAAAGATGGAGGTACAAGCACTAATCAATTTGAGAACAAGCCTAGAAACGAAGTACCAAGAAAGTGGACCAAAAGGTCCATTGTGGGAGGAGATCTCAACCTTGATGAAGAAAATGGGGTACAATAGAAATGCCAAAAGGTGCAAAGAGAAGTGGGAGAACATTAACAAGTACTTCAAGAAAGTCAAGGAAAGCAACAGGAAGAGGCCTGAAGACTCAAAGACATGTCCTTACTTTCACCAATTGGATGCTCTATACAAGAACAAGCTAGAGGCGCAAATGAAGCCGGAGAGCATGATAGCACCGCTTATGGTGCAGCCAGAGCAACAATGGCCTCCTCAGCAAGTGGTGCCGCCAGAAGTGTCCATGGTAGACGCCCAGAATGACCCCATGGATCGGAGACACCATAATGAGGATGATGATGATGAGGATGACAAGGAAATTGGTGATCAAGATGAAGATGAAGATGAAGAAGATGAAGGTGGTAATTATGAGATAGTAGCAAGCAAGCCAGCTTCTACTGGTGCTTCTATTGAGTGAGAAGAACAAACATTACCCCAAAAAGTGCATCAATTAGAATATGGTGGGTCAAAGAGGTGCACTGATTGTTGGAACAATGGTGGTGTAGGATGAAATGTGGTAGTGGTCGTGGTGGACAGTGACAAGGTTGTGTTGAAGATTTTGGAAATGCATGTACTTCAGAATGACACATGGGTATAGGGATAGCCATTAGGATGGGAAATCTGGGTTGAAAGTACTTGGTGCAATAGCAGCATATAGTCAATAAGATTATATGTTCTTTTTTGTTTTCAAAAAAAAAAATAATTAATTATTTTTTGAGCTAAATAAATAAGTTGATGAATGAGAGAGAAAGTTAAAGATAGAAGAAAGATTTAGACTTGAGAGGTTCAACATAAATGAATAAACATTGTACTATGTTTTTTTTACTAAATTATCATGTTTATGTTCATGTTGATGTAAATGGGAGAAGTAGATAATTGGGTGATTTGTCT 2558 0.4324 MLGDSAVLGTGGGGGSADTVAATVSAAAHDGGADMAGGGGDGGGGGSNSGDDERGRGEEGDKSFGGNRWPRQETLALLKIRSDMDAAFRDASVKGPLWEEVSRKLAELGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSEGKTYRFFDQLQALESNPVNHGIQSPPSMSQTIALPATPVSIVVTTTPSSIMSSFPPTTTMSLPPVSNNTTTTTTVPSATTPSMPQAILNITPPSTLNITTPSYPSSNPSYFPTQTPNPTSNNNTNNPPNTINPPSFPNIPRDLLSNSSSSSTSSEETTVEGGGTRRKRKRKWKDFFEKLMKEVIEKQEELQRRFLEAIEKREQERVVREEAWRMKEVQRINREREILAQERSIAAAKDAAVMSFLQKIADHQQQEINLEPALNNNNNSSVALQQPVPQGTTKPIPSPTPTQQQAQMTIVEAPPVQPSLALQQQQQQVVTDAEISKADNNGENLMMGPSSSRWPKMEVQALINLRTSLETKYQESGPKGPLWEEISTLMKKMGYNRNAKRCKEKWENINKYFKKVKESNRKRPEDSKTCPYFHQLDALYKNKLEAQMKPESMIAPLMVQPEQQWPPQQVVPPEVSMVDAQNDPMDRRHHNEDDDDEDDKEIGDQDEDEDEEDEGGNYEIVASKPASTGASIE 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01019 661 MobiDBLite consensus disorder prediction 30 69 - -
Pste9g01019 661 MobiDBLite consensus disorder prediction 51 66 - -
Pste9g01019 661 ProSiteProfiles Myb-like domain profile. 480 538 IPR001005 -
Pste9g01019 661 MobiDBLite consensus disorder prediction 194 309 - -
Pste9g01019 661 SMART sant 65 127 IPR001005 -
Pste9g01019 661 SMART sant 478 540 IPR001005 -
Pste9g01019 661 ProSiteProfiles Myb-like domain profile. 61 125 IPR001005 -
Pste9g01019 661 MobiDBLite consensus disorder prediction 603 661 - -
Pste9g01019 661 Coils Coil 313 344 - -
Pste9g01019 661 MobiDBLite consensus disorder prediction 402 434 - -
Pste9g01019 661 MobiDBLite consensus disorder prediction 279 299 - -
Pste9g01019 661 Gene3D - 482 543 - -
Pste9g01019 661 Gene3D - 69 130 - -
Pste9g01019 661 Pfam Myb/SANT-like DNA-binding domain 480 567 IPR044822 -
Pste9g01019 661 Pfam Myb/SANT-like DNA-binding domain 67 153 IPR044822 -
Pste9g01019 661 PANTHER FI21293P1 39 616 - -
Pste9g01019 661 FunFam Trihelix transcription factor GT-2 482 543 - -
Pste9g01019 661 MobiDBLite consensus disorder prediction 624 644 - -
Pste9g01019 661 CDD GT1 480 545 - -
Pste9g01019 661 MobiDBLite consensus disorder prediction 194 269 - -
Pste9g01019 661 MobiDBLite consensus disorder prediction 609 623 - -
Pste9g01019 661 FunFam Trihelix transcription factor GT-2 69 130 - -
Pste9g01019 661 CDD GT1 67 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01019 Pste-Chr9 6865545 6869518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01019 65 592 Trihelix Transcription Factor Family AT1G76890 47.664 7.23e-141 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste9g01019 Myb_DNA-bind_4 5.4e-21 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01019 9 6865545 6869518 Pste4g02614 4 18473992 18477429 PCT