Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01018 CTAGCTGTAATTGCATAGGGACACAACATCTCCATAGCTATATGCAGCTAGGAGACTCAAGTGTGTTGGAGATCTCCTCCTACAACAAGGCCAAGATAGCGGTGGCAGCCGCCGTGTCACAGCCAGAAGTGGCGGTTCATGACCGCAACGACAACGATGATGGTGATGACAGTGGTAATGATGGTGGTGATGAAATGGTTGGGATGGACTTGGATGCAAATTCTGGTGAAGGGAATGAAGGTAATAAGATGAGCTTTGGAGGGAACCGGTGGCCCCGCCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCAGATATGGATGCAGTTTTCCGAGATTCATGTCTTAAAGGTCCACTTTGGGAAGAAGTTTCAAGGAAAATGGCCGGGTTTGGATATCAACGAAGTGCAAAGAAGTGCAAGGAAAAGTTTGAGAACGTGTACAAGTACAACAAGAGAACCAAAGAGAACAAAAGTGGCAAATCACAAGGAAAAACCTACAAATTCTTTGATCAATTACAAGCCCTTGAGAACCACCAATTCACAGTGTCTTACCCGCCAAAACCACAACCTATTACTTTGGCAACAACAGACACTGTGACATTGCCAACAGGGCCAAGTGATCAAGGTAACAAACCTATCTCTTATGTCAAACCTTTTCCTTCCACAAACCCTACACTCATTTCTCCTTCACCACAAACCAACACTACCACATCCACAACCAACCCAAGAGACCCAATATCTCCACCACAAACCAACAACAACAACAATAATGTGACACATAATTCTTTGCCAAACATGAACGCCCATTTCTCAACCACTACCACCACCACCACCGCCACTTCATCTTCCACAGCATCAGATGAAGACTTGGAAGAGAGGTATAGGAGGAAGAGGAAGTGGAAGGACTACTTCAGGAAGCTCACAAAGAAGGTTCTAGTGAAGCAAGAGGAGATGCAAAAGAAATTCTTGGAAGCCATGGACAAAAGAGAGAGGGAAAGAGTGGTACAACAAGACAATTGGAGGATGCAAGAAATGGCAAGGATTAATAGGGAGCATGAGATTCTTGTTCAAGAGAGATCCACAGCAGTAGCCAAAGATGCTGCTGTTATTGCATTATTGCAAAAACTGTATGGCCAACAAAACCCCACACAACAAGTTGAAGTAGAGCCACCACAACAAATACAAACCATGCCACAATCACAGCCTCCAATATTAATGCCAAACAGTAATGTTGAGATCAAGAAAATGAATAATGGTCACAGAGCTATCAGTACTACTAATGCTACTACTTCTATTTCTATTGCTACTACTTCTCCAATGAACTCTTCTTCGCGGTGGCCCAAAGCAGAAGTTCATGCTTTGATAAGGTTAAGGACAAGTCTTGATACCAAGTACCAAGAAAATGGACCAAAAGCTCCATTGTGGGAAGATATATCAATTGCAATGCAGAGGCTTGGATACAACCGAAGTGCAAAGAGATGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTGAGGGAGAATAACAAAGAAAGGCGTGAAGATAGCAAAACATGCCCCTATTTTCACGAGCTTGAGGCTCTCTACAAAGAAAAGGGCAAATCGCAGAACCCCTTTGGCACGTCTCAGAATATGAAGCCAAATGAGATGATGATGATGGAGCCCTTGATGGTGCAACCGGAGCAACAATGGAGGCCTCCACCTCATTCGTTGGAAGAAGGTATAGGGAATGAGAATGCAAGCGATCAAGAAAAACAAGAAGAGGAAAATGGTGGTCACGATGAAGATGGAGATAGTGTGGAAGCTGAAGGAGCAAGCCCGTGTTAGATTGTGACAAATAATTAAACATGCTTCAGTGGACACAGTTGAAGGAGACAAGATAAGGAATTTTCAGAATGGAGAACAAAATTTACGTGTGTTATAATTTACTTTTACTTATTTTGGAAAAATAGTCCTTTCCTTTTTTTAATAATTTTTTTAAAAATTCAAAATGTGATTATTAATTTCTTAAGGAAACAATTCCCGGGGTATAGTCATTCAATTTTTATTTTTCTTATGGGTGTAACTTGTAACATGTTACTGCAAAACATATTGTCATATATTGTTGACATTAAAGGCATGGCACAAACACCTGCGCCAGAAAATTCAATTCTTTAATCATGATTCTTGACCTATCTAAAAGCATGGGCTTCTGTGGCAGCACATAACATACCCTATCTGAGGAGAGACTTTTTCTGGGGTATCATAAAAGGTGATGATTGGGGTAGTGGGTCAGGTTCTGCGCCATGAACTACATTCAGAGATTTAACTCAAAAAATATAGCCACATGGGCCAGCAAAGCAGCTATAGTGGGGGTGTACAATGTGTTTTAGACAGATAAATTATGAATAATGTTATCTTTTTAAATTTCTTACAAACATTTTTATACCATTTTTCAAC 2447 0.4095 MQLGDSSVLEISSYNKAKIAVAAAVSQPEVAVHDRNDNDDGDDSGNDGGDEMVGMDLDANSGEGNEGNKMSFGGNRWPRQETLALLKIRSDMDAVFRDSCLKGPLWEEVSRKMAGFGYQRSAKKCKEKFENVYKYNKRTKENKSGKSQGKTYKFFDQLQALENHQFTVSYPPKPQPITLATTDTVTLPTGPSDQGNKPISYVKPFPSTNPTLISPSPQTNTTTSTTNPRDPISPPQTNNNNNNVTHNSLPNMNAHFSTTTTTTTATSSSTASDEDLEERYRRKRKWKDYFRKLTKKVLVKQEEMQKKFLEAMDKRERERVVQQDNWRMQEMARINREHEILVQERSTAVAKDAAVIALLQKLYGQQNPTQQVEVEPPQQIQTMPQSQPPILMPNSNVEIKKMNNGHRAISTTNATTSISIATTSPMNSSSRWPKAEVHALIRLRTSLDTKYQENGPKAPLWEDISIAMQRLGYNRSAKRCKEKWENINKYFKKVRENNKERREDSKTCPYFHELEALYKEKGKSQNPFGTSQNMKPNEMMMMEPLMVQPEQQWRPPPHSLEEGIGNENASDQEKQEEENGGHDEDGDSVEAEGASPC 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01018 597 SMART sant 73 135 IPR001005 -
Pste9g01018 597 SMART sant 428 490 IPR001005 -
Pste9g01018 597 CDD GT1 430 495 - -
Pste9g01018 597 Gene3D - 77 138 - -
Pste9g01018 597 Gene3D - 432 493 - -
Pste9g01018 597 ProSiteProfiles Myb-like domain profile. 424 488 IPR001005 -
Pste9g01018 597 MobiDBLite consensus disorder prediction 168 279 - -
Pste9g01018 597 MobiDBLite consensus disorder prediction 547 597 - -
Pste9g01018 597 Pfam Myb/SANT-like DNA-binding domain 430 517 IPR044822 -
Pste9g01018 597 Pfam Myb/SANT-like DNA-binding domain 75 161 IPR044822 -
Pste9g01018 597 MobiDBLite consensus disorder prediction 567 589 - -
Pste9g01018 597 MobiDBLite consensus disorder prediction 27 75 - -
Pste9g01018 597 ProSiteProfiles Myb-like domain profile. 69 133 IPR001005 -
Pste9g01018 597 FunFam Trihelix transcription factor GT-2 77 138 - -
Pste9g01018 597 FunFam Trihelix transcription factor GT-2 432 493 - -
Pste9g01018 597 CDD GT1 75 140 - -
Pste9g01018 597 MobiDBLite consensus disorder prediction 168 271 - -
Pste9g01018 597 PANTHER FI21293P1 37 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01018 Pste-Chr9 6819565 6822779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01018 73 552 Trihelix Transcription Factor Family AT1G76890 46.575 6.16e-138 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste9g01018 Myb_DNA-bind_4 4.5e-21 CL0123