Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01017 GAAGAGTTTTTTCTTGGGCTGCGTGGCCATTGTGGAGAAAAATAAACCATATGTAGCAATGTTGTTTATTCAGTTTGTGTATGCAGGAATGGCCTTGTTGTCTAAGGTTGCAATTTCCAAGGGAATGAGCCCTTATGTGTTTGTTGTTTATAGACAAGCCTTTGCATCAGTTGCCTTATCTCCATTTGCTTTCTTTGACAGTAAGCAACCAGCTCCTCTGTCATGCAATTTGTTGTGCAAATTATTTCTAGTTTCCCTTGTTGGGTTAACGGCAAGTTCAAACCTTTACTATGTTTCAATCAACTACACCACTGCAACATATGCTGCAGCAGCCACAAACACTGTCCCTGCCATTACTTTCATCATGGCTCTTTTAATTAGGGTGGAAACCATTTCCATAAAACGTGTGCATGGATTAGCCAAGATTTTGGGTTCTGTTCTAAGCCTAGCTGGGGCAATTATATTTGCTTTAATCAAAGGATCTGCCCTTAAATGGTATCCAGAAAATCAGAACCATAGTTCTCACCTTTCAACTATTGTTCACTCCAAAGGTGACACTATTAAGGGCTCTCTTATGATGCTCTCAGCAAACACTGCATGGTCCTTGTGGCTTATCTTGCAGGGATTTGTTGTGAAGCAGTACCCTGCAAAATTTCGCCTTACTGCTCTACAATGCATGTTTAGCTTCATGCAATCCATTGTTGTGGCTGTTGCAGTAGAGAGGAATAATCCTTCAGCATGGAAGCTTGGATGGGATATTCATCTTCTTTCTGTGGCTTACTGTGGTGTAATCGTAACAGGCATTTGTTATTGGCTACAAGTCTGCACAATAGAGACGAAAGGCCCAGTTTTCACAGCAATGTTCACTCCTTTGGCTCTTATAATCACAGCAATATTCTCAGCACTTTTGTGGAAAGAACCACTTTACTTTGGAAGTGTACTGTGGGGGAAGAGCAAGGAGAGTATAAAGGAGGGTGTAAAAGGAGAAAACAAAGAAGCTGAACAAACCAAAGAGGAAACCAGATTGGAATGCATTGAATGGCCTTGCTGTCTAAGGCTGCAATTTCCCAGGAAACGAGCCCTTATAAAGCAACCAGCTCCTCCATCATGCAATTTGTTGTGCAAATTGTTTCTAGTTTCCCTTTTTGAGTATGCATATATCTCTTTGATACATAGGTTAATGGCAAGTTTAAACCTTTACTATGTTTCAATCAAGTACACCACTGCAACATATGCTGCAGCATCTGCAAACACTATCCCTGCCATTACTTTCATCATGACTCTTTTATTTAGGGTGGAAAGCATTTCAATAAAACGTGTGCATGGATTGGCCAAGATTTTAGGTTCTGTTCTAAGCCTTTCTGCGGCAATTACACTTGCTTTGGTTAAAGGACCTCCCATTAAATGGTATCCAGAAAATCAGAACCATACTTCTCACCCTTCTCTTATGATGCTCTCACCATACAATATTATAGGTTACCTCATTGCTCTGTCCCTCATCATATTATATTAT 1513 0.4038 MLFIQFVYAGMALLSKVAISKGMSPYVFVVYRQAFASVALSPFAFFDSKQPAPLSCNLLCKLFLVSLVGLTASSNLYYVSINYTTATYAAAATNTVPAITFIMALLIRVETISIKRVHGLAKILGSVLSLAGAIIFALIKGSALKWYPENQNHSSHLSTIVHSKGDTIKGSLMMLSANTAWSLWLILQGFVVKQYPAKFRLTALQCMFSFMQSIVVAVAVERNNPSAWKLGWDIHLLSVAYCGVIVTGICYWLQVCTIETKGPVFTAMFTPLALIITAIFSALLWKEPLYFGSVLWGKSKESIKEGVKGENKEAEQTKEETRLECIEWPCCLRLQFPRKRALIKQPAPPSCNLLCKLFLVSLFEYAYISLIHRLMASLNLYYVSIKYTTATYAAASANTIPAITFIMTLLFRVESISIKRVHGLAKILGSVLSLSAAITLALVKGPPIKWYPENQNHTSHPSLMMLSPYNIIGYLIALSLIILYY 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01017 485 Pfam EamA-like transporter family 169 295 IPR000620 GO:0016020
Pste9g01017 485 Pfam EamA-like transporter family 4 129 IPR000620 GO:0016020
Pste9g01017 485 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 294 - -
Pste9g01017 485 PANTHER WAT1-RELATED PROTEIN 354 467 IPR030184 GO:0016020|GO:0022857
Pste9g01017 485 SUPERFAMILY Multidrug resistance efflux transporter EmrE 373 434 - -
Pste9g01017 485 Coils Coil 300 324 - -
Pste9g01017 485 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01017 Pste-Chr9 6727295 6741132 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01017 379 459 Nodulin-like Gene Family AT2G39510 42.169 4.12e-17 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01017 9 6727295 6741132 Pste9g01017 9 6727295 6741132 ECH