Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00997 ATGGAAGACGAGATCGCAGAACGTTACGACCACGACATGGCCCTTATGGAGTTGCGTGAGGTGGAATCTGCATTGAACTCCGGCAACTCCAAGACCACCGTCTCAAGAAGAAAATCGGTGCATTGGACTGAGAATGAACACAGGTTGTTTCTAGCTGGTCTTGATCAATATGGTAAAGGAGATTGGAAAAACATAGCAAGACATTATGTAAAGACAAAAACTCATATTCAAGTTGCTAGTCATGCTCAAAAATATTTTAATAGGTCAATAGCAATTTCAAGAAAGATGAATAAAAGAAAAAGCATTCATGACATAAGGTTGCAAAATGAAGATAATATGATCCATCAAGATGCTACTCAACCAAACATGACTCCTCTTCAAGAACTTCCACAGCTACAATGGTATCCAACACTACAAGATGAAAACATTGTCACTCAACAAATTCAAGTTCCTGCATCAGAATTTTTTTTCCAAGAATCATATGGAAATCAACAAATTCAATTTCTTCTACCGGAACTTCCAATGCAGCAACAAGAGTATGAAACGTCAAAAAATTACTACAACGACCAGTTTTCTCAACACATTGATCACCAAATTCAGTTTTTTTCATCAGACCCTACAATGCAACAACCTCTCCCAGATTTTTCAATACAACAACAACATGAAACATTACAAGATTACCAAAATATGGTTAAAAGCATTGATGTTCAAGTTCCTCCATTATTACAACCTCCAATGCAGCAGTGGAATGAAGCACTACCAAATCATGACATAATCTCTCAACAAAATAGAGATATATATGCTCCCTGTACAAATTGGTCAACCCAACATGGTTCAATTAAATTTAGAAATATTTAA 858 0.3601 MEDEIAERYDHDMALMELREVESALNSGNSKTTVSRRKSVHWTENEHRLFLAGLDQYGKGDWKNIARHYVKTKTHIQVASHAQKYFNRSIAISRKMNKRKSIHDIRLQNEDNMIHQDATQPNMTPLQELPQLQWYPTLQDENIVTQQIQVPASEFFFQESYGNQQIQFLLPELPMQQQEYETSKNYYNDQFSQHIDHQIQFFSSDPTMQQPLPDFSIQQQHETLQDYQNMVKSIDVQVPPLLQPPMQQWNEALPNHDIISQQNRDIYAPCTNWSTQHGSIKFRNI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00997 285 FunFam transcription factor MYB1R1 40 91 - -
Pste9g00997 285 NCBIfam myb-like DNA-binding domain, SHAQKYF class 38 88 IPR006447 GO:0003677
Pste9g00997 285 Gene3D - 40 92 - -
Pste9g00997 285 Pfam Myb-like DNA-binding domain 41 86 IPR001005 -
Pste9g00997 285 CDD SANT 42 86 IPR001005 -
Pste9g00997 285 SMART sant 38 88 IPR001005 -
Pste9g00997 285 PANTHER TRANSCRIPTION FACTOR KUA1 27 213 - -
Pste9g00997 285 SUPERFAMILY Homeodomain-like 35 88 IPR009057 -
Pste9g00997 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 90 IPR017930 -
Pste9g00997 285 ProSiteProfiles Myb-like domain profile. 34 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00997 Pste-Chr9 6473936 6476586 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste9g00997 Myb_DNA-binding 3.4e-09 CL0123